RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 TAF6LQ9Y6J9 622 aa13.92□□□□□ -0.18
HDAC4-202ENST00000430200 SNHG28P0DPA3 235 aa13.91□□□□□ -0.18
HDAC4-202ENST00000430200 TOP1P11387 765 aaKnown RBP13.91□□□□□ -0.18
HDAC4-202ENST00000430200 ACLYP53396 1101 aa13.91□□□□□ -0.18
HDAC4-202ENST00000430200 C1orf53Q5VUE5 145 aa13.91□□□□□ -0.18
HDAC4-202ENST00000430200 BTNL9Q6UXG8 535 aa13.91□□□□□ -0.18
HDAC4-202ENST00000430200 MSL3Q8N5Y2 521 aaKnown RBP13.91□□□□□ -0.18
HDAC4-202ENST00000430200 BADQ92934 168 aa13.91□□□□□ -0.18
HDAC4-202ENST00000430200 TRERF1Q96PN7 1200 aa13.91□□□□□ -0.18
HDAC4-202ENST00000430200 UPF3AQ9H1J1 476 aaKnown RBP13.91□□□□□ -0.18
HDAC4-202ENST00000430200 PDGFCQ9NRA1 345 aa13.91□□□□□ -0.18
HDAC4-202ENST00000430200 TCP11L1Q9NUJ3 509 aa13.91□□□□□ -0.18
HDAC4-202ENST00000430200 FBXO40Q9UH90 709 aa13.91□□□□□ -0.18
HDAC4-202ENST00000430200 CCPG1Q9ULG6 757 aa13.91□□□□□ -0.18
HDAC4-202ENST00000430200 MYH7BA7E2Y1 1941 aa13.91□□□□□ -0.18
HDAC4-202ENST00000430200 SPTBN5Q9NRC6 3674 aaKnown RBP13.9□□□□□ -0.18
HDAC4-202ENST00000430200 POTEB2H3BUK9 544 aa13.9□□□□□ -0.18
HDAC4-202ENST00000430200 PQBP1O60828 265 aaKnown RBP13.9□□□□□ -0.18
HDAC4-202ENST00000430200 ICAM1P05362 532 aa13.9□□□□□ -0.18
HDAC4-202ENST00000430200 GOLGA8HP0CJ92 632 aa13.9□□□□□ -0.18
HDAC4-202ENST00000430200 ZNF543Q08ER8 600 aa13.9□□□□□ -0.18
HDAC4-202ENST00000430200 SYDE2Q5VT97 1194 aa13.9□□□□□ -0.18
HDAC4-202ENST00000430200 FBXO16Q8IX29 292 aaPredicted RBP13.9□□□□□ -0.18
HDAC4-202ENST00000430200 CHURC1Q8WUH1 139 aa13.9□□□□□ -0.18
HDAC4-202ENST00000430200 CLEC4DQ8WXI8 215 aa13.9□□□□□ -0.18
HDAC4-202ENST00000430200 CTDP1Q9Y5B0 961 aaPredicted RBP13.9□□□□□ -0.18
HDAC4-202ENST00000430200 TRANK1O15050 2925 aa13.9□□□□□ -0.18
HDAC4-202ENST00000430200 B4E1Z4 1266 aa13.89□□□□□ -0.19
HDAC4-202ENST00000430200 RBAK-RBAKDNI3L0D1 243 aa13.89□□□□□ -0.19
HDAC4-202ENST00000430200 KDM4AO75164 1064 aa13.89□□□□□ -0.19
HDAC4-202ENST00000430200 DUSP11O75319 330 aaKnown RBP13.89□□□□□ -0.19
HDAC4-202ENST00000430200 CST5P28325 142 aaPredicted RBP13.89□□□□□ -0.19
HDAC4-202ENST00000430200 BEX3Q00994 111 aa13.89□□□□□ -0.19
HDAC4-202ENST00000430200 SHHQ15465 462 aa13.89□□□□□ -0.19
HDAC4-202ENST00000430200 KCNA10Q16322 511 aa13.89□□□□□ -0.19
HDAC4-202ENST00000430200 TTC22Q5TAA0 569 aa13.89□□□□□ -0.19
HDAC4-202ENST00000430200 RNF180Q86T96 592 aa13.89□□□□□ -0.19
HDAC4-202ENST00000430200 TICAM2Q86XR7 235 aa13.89□□□□□ -0.19
HDAC4-202ENST00000430200 ABHD16BQ9H3Z7 469 aa13.89□□□□□ -0.19
HDAC4-202ENST00000430200 DIAPH3Q9NSV4 1193 aa13.89□□□□□ -0.19
HDAC4-202ENST00000430200 FAM184BQ9ULE4 1060 aa13.89□□□□□ -0.19
HDAC4-202ENST00000430200 ASGR1P07306 291 aa13.88□□□□□ -0.19
HDAC4-202ENST00000430200 C6orf222P0C671 652 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-202ENST00000430200 FDX1P10109 184 aa13.88□□□□□ -0.19
HDAC4-202ENST00000430200 GJA9P57773 515 aa13.88□□□□□ -0.19
HDAC4-202ENST00000430200 FAAP100Q0VG06 881 aa13.88□□□□□ -0.19
HDAC4-202ENST00000430200 TAPT1Q6NXT6 567 aa13.88□□□□□ -0.19
HDAC4-202ENST00000430200 NSMFQ6X4W1 530 aa13.88□□□□□ -0.19
HDAC4-202ENST00000430200 MFSD6Q6ZSS7 791 aa13.88□□□□□ -0.19
HDAC4-202ENST00000430200 EEPD1Q7L9B9 569 aa13.88□□□□□ -0.19
HDAC4-202ENST00000430200 GNEQ9Y223 722 aaKnown RBP13.88□□□□□ -0.19
HDAC4-202ENST00000430200 CLTBP09497 229 aa13.87□□□□□ -0.19
HDAC4-202ENST00000430200 SMPD1P17405 629 aa13.87□□□□□ -0.19
HDAC4-202ENST00000430200 BAATQ14032 418 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-202ENST00000430200 COL9A3Q14050 684 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-202ENST00000430200 SLC35G1Q2M3R5 365 aa13.87□□□□□ -0.19
HDAC4-202ENST00000430200 TKFCQ3LXA3 575 aa13.87□□□□□ -0.19
HDAC4-202ENST00000430200 ANKRD33Q7Z3H0 272 aa13.87□□□□□ -0.19
HDAC4-202ENST00000430200 SKAP1Q86WV1 359 aa13.87□□□□□ -0.19
HDAC4-202ENST00000430200 DEFB123Q8N688 67 aa13.87□□□□□ -0.19
HDAC4-202ENST00000430200 ENAHQ8N8S7 591 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-202ENST00000430200 MORC4Q8TE76 937 aa13.87□□□□□ -0.19
HDAC4-202ENST00000430200 DSCC1Q9BVC3 393 aa13.87□□□□□ -0.19
HDAC4-202ENST00000430200 STARD7Q9NQZ5 370 aa13.87□□□□□ -0.19
HDAC4-202ENST00000430200 TBX21Q9UL17 535 aa13.87□□□□□ -0.19
HDAC4-202ENST00000430200 GRIN2DO15399 1336 aa13.87□□□□□ -0.19
HDAC4-202ENST00000430200 CUL9Q8IWT3 2517 aa13.87□□□□□ -0.19
HDAC4-202ENST00000430200 MOXD2PA6NHM9 499 aa13.86□□□□□ -0.19
HDAC4-202ENST00000430200 KIAA0355O15063 1070 aa13.86□□□□□ -0.19
HDAC4-202ENST00000430200 ALDH5A1P51649 535 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-202ENST00000430200 NKX3-2P78367 333 aa13.86□□□□□ -0.19
HDAC4-202ENST00000430200 PPP4R3BQ5MIZ7 849 aa13.86□□□□□ -0.19
HDAC4-202ENST00000430200 CYB5R4Q7L1T6 521 aa13.86□□□□□ -0.19
HDAC4-202ENST00000430200 TLK2Q86UE8 772 aa13.86□□□□□ -0.19
HDAC4-202ENST00000430200 GUCD1Q96NT3 240 aa13.86□□□□□ -0.19
HDAC4-202ENST00000430200 LBHD1Q9BQE6 289 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-202ENST00000430200 TSEN34Q9BSV6 310 aaKnown RBP13.86□□□□□ -0.19
HDAC4-202ENST00000430200 UBA5Q9GZZ9 404 aa13.86□□□□□ -0.19
HDAC4-202ENST00000430200 MTMR10Q9NXD2 777 aa13.86□□□□□ -0.19
HDAC4-202ENST00000430200 TNKSO95271 1327 aa13.86□□□□□ -0.19
HDAC4-202ENST00000430200 TRIP12Q14669 1992 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-202ENST00000430200 ZNF213O14771 459 aa13.85□□□□□ -0.19
HDAC4-202ENST00000430200 PCP11498 1178 aaKnown RBP13.85□□□□□ -0.19
HDAC4-202ENST00000430200 CDK7P50613 346 aa13.85□□□□□ -0.19
HDAC4-202ENST00000430200 TNFAIP2Q03169 654 aa13.85□□□□□ -0.19
HDAC4-202ENST00000430200 PTH1RQ03431 593 aa13.85□□□□□ -0.19
HDAC4-202ENST00000430200 CXCL17Q6UXB2 119 aa13.85□□□□□ -0.19
HDAC4-202ENST00000430200 STOX1Q6ZVD7 989 aa13.85□□□□□ -0.19
HDAC4-202ENST00000430200 FAM126BQ8IXS8 530 aa13.85□□□□□ -0.19
HDAC4-202ENST00000430200 PNMA1Q8ND90 353 aa13.85□□□□□ -0.19
HDAC4-202ENST00000430200 ESR2Q92731 530 aa13.85□□□□□ -0.19
HDAC4-202ENST00000430200 SENP2Q9HC62 589 aa13.85□□□□□ -0.19
HDAC4-202ENST00000430200 ZSWIM5Q9P217 1185 aa13.85□□□□□ -0.19
HDAC4-202ENST00000430200 COL20A1Q9P218 1284 aa13.85□□□□□ -0.19
HDAC4-202ENST00000430200 TET1Q8NFU7 2136 aa13.85□□□□□ -0.19
HDAC4-202ENST00000430200 UMODL1Q5DID0 1318 aa13.85□□□□□ -0.19
HDAC4-202ENST00000430200 WDR19Q8NEZ3 1342 aa13.85□□□□□ -0.19
HDAC4-202ENST00000430200 MFAP1P55081 439 aaKnown RBP13.84□□□□□ -0.19
HDAC4-202ENST00000430200 SEC23AQ15436 765 aa13.84□□□□□ -0.19
HDAC4-202ENST00000430200 USH1GQ495M9 461 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms