RNA–Protein interactions for RNA: ENST00000430081.5

OPTN-208, Transcript of optineurin, humanhuman

TSL 5

Gene OPTN, Length 848 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-208ENST00000430081 GRIN2DO15399 1336 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 IGKV6D-41A0A0C4DH26 115 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 SOWAHBA6NEL2 793 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 GSG1L2A8MUP6 293 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 TMEM232C9JQI7 657 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 ERC2O15083 957 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 APPP05067 770 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 ACTN1P12814 892 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 MYOGP15173 224 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 SMPD1P17405 629 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 TDO2P48775 406 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 STAT2P52630 851 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 TFF2Q03403 129 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 FAM160B2Q86V87 743 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 SCLYQ96I15 445 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 TRERF1Q96PN7 1200 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 WNT8AQ9H1J5 351 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 CHMP4BQ9H444 224 aaKnown RBP12.23□□□□□ -0.45
OPTN-208ENST00000430081 A1CFQ9NQ94 594 aaKnown RBP12.23□□□□□ -0.45
OPTN-208ENST00000430081 Q9Y3F1 56 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 SMCHD1A6NHR9 2005 aa12.23□□□□□ -0.45
OPTN-208ENST00000430081 PRDM1O75626 825 aa12.22□□□□□ -0.45
OPTN-208ENST00000430081 SLC3A2P08195 630 aaKnown RBP12.22□□□□□ -0.45
OPTN-208ENST00000430081 TSPY3P0CV98 308 aa12.22□□□□□ -0.45
OPTN-208ENST00000430081 TSPY8P0CW00 308 aa12.22□□□□□ -0.45
OPTN-208ENST00000430081 ALAS1P13196 640 aa12.22□□□□□ -0.45
OPTN-208ENST00000430081 GNAT2P19087 354 aa12.22□□□□□ -0.45
OPTN-208ENST00000430081 PSMC6P62333 389 aa12.22□□□□□ -0.45
OPTN-208ENST00000430081 KIAA1211Q6ZU35 1233 aa12.22□□□□□ -0.45
OPTN-208ENST00000430081 EEPD1Q7L9B9 569 aa12.22□□□□□ -0.45
OPTN-208ENST00000430081 SIRT2Q8IXJ6 389 aa12.22□□□□□ -0.45
OPTN-208ENST00000430081 STAG1Q8WVM7 1258 aa12.22□□□□□ -0.45
OPTN-208ENST00000430081 AGBL1Q96MI9 1066 aa12.22□□□□□ -0.45
OPTN-208ENST00000430081 ALDH8A1Q9H2A2 487 aaPredicted RBP12.22□□□□□ -0.45
OPTN-208ENST00000430081 DDX19BQ9UMR2 479 aa12.22□□□□□ -0.45
OPTN-208ENST00000430081 COG5Q9UP83 839 aa12.22□□□□□ -0.45
OPTN-208ENST00000430081 HCN4Q9Y3Q4 1203 aa12.22□□□□□ -0.45
OPTN-208ENST00000430081 TTC28Q96AY4 2481 aa12.22□□□□□ -0.45
OPTN-208ENST00000430081 KIF28PB7ZC32 967 aa12.21□□□□□ -0.45
OPTN-208ENST00000430081 SLC1A4P43007 532 aa12.21□□□□□ -0.45
OPTN-208ENST00000430081 KCNQ1P51787 676 aa12.21□□□□□ -0.45
OPTN-208ENST00000430081 PDE4BQ07343 736 aa12.21□□□□□ -0.45
OPTN-208ENST00000430081 PPP4R3BQ5MIZ7 849 aa12.21□□□□□ -0.45
OPTN-208ENST00000430081 DEFB128Q7Z7B8 93 aa12.21□□□□□ -0.45
OPTN-208ENST00000430081 FBXO16Q8IX29 292 aaPredicted RBP12.21□□□□□ -0.45
OPTN-208ENST00000430081 APPBP2Q92624 585 aa12.21□□□□□ -0.45
OPTN-208ENST00000430081 NACAP1Q9BZK3 213 aa12.21□□□□□ -0.45
OPTN-208ENST00000430081 LRRCC1Q9C099 1032 aa12.21□□□□□ -0.45
OPTN-208ENST00000430081 CERS4Q9HA82 394 aa12.21□□□□□ -0.45
OPTN-208ENST00000430081 VTA1Q9NP79 307 aa12.21□□□□□ -0.45
OPTN-208ENST00000430081 GPHNQ9NQX3 736 aaPredicted RBP12.21□□□□□ -0.45
OPTN-208ENST00000430081 PDGFCQ9NRA1 345 aa12.21□□□□□ -0.45
OPTN-208ENST00000430081 POLR3EQ9NVU0 708 aa12.21□□□□□ -0.45
OPTN-208ENST00000430081 MTCH2Q9Y6C9 303 aa12.21□□□□□ -0.45
OPTN-208ENST00000430081 ZNFX1Q9P2E3 1918 aaKnown RBP12.21□□□□□ -0.46
OPTN-208ENST00000430081 PATL2C9JE40 543 aaKnown RBP12.2□□□□□ -0.46
OPTN-208ENST00000430081 RFXAPO00287 272 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 RNF113AO15541 343 aaKnown RBP12.2□□□□□ -0.46
OPTN-208ENST00000430081 GPAA1O43292 621 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 CA3P07451 260 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 CYP2C9P11712 490 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 POU3F3P20264 500 aaPredicted RBP12.2□□□□□ -0.46
OPTN-208ENST00000430081 MCCP23508 829 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 RFC2P35250 354 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 TFAP4Q01664 338 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 TTLL4Q14679 1199 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 LRRFIP1Q32MZ4 808 aaKnown RBP12.2□□□□□ -0.46
OPTN-208ENST00000430081 BRDTQ58F21 947 aaPredicted RBP12.2□□□□□ -0.46
OPTN-208ENST00000430081 TAPT1Q6NXT6 567 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 KBTBD3Q8NAB2 608 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 RETREG2Q8NC44 543 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 NEDD1Q8NHV4 660 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 PHOSPHO2Q8TCD6 241 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 OSBP2Q969R2 916 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 CHMP4CQ96CF2 233 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 GPATCH3Q96I76 525 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 GMCL1Q96IK5 515 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 SLC9A7Q96T83 725 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 ECHDC1Q9NTX5 307 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 ZBTB40Q9NUA8 1239 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 TRMT13Q9NUP7 481 aaKnown RBP12.2□□□□□ -0.46
OPTN-208ENST00000430081 CYP39A1Q9NYL5 469 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 ARIH1Q9Y4X5 557 aaPredicted RBP12.2□□□□□ -0.46
OPTN-208ENST00000430081 PLXNA1Q9UIW2 1896 aa12.2□□□□□ -0.46
OPTN-208ENST00000430081 COL11A1P12107 1806 aaPredicted RBP12.2□□□□□ -0.46
OPTN-208ENST00000430081 ZNF536O15090 1300 aa12.19□□□□□ -0.46
OPTN-208ENST00000430081 TNKSO95271 1327 aa12.19□□□□□ -0.46
OPTN-208ENST00000430081 PLA2G6O60733 806 aa12.19□□□□□ -0.46
OPTN-208ENST00000430081 ZFYP08048 801 aaPredicted RBP12.19□□□□□ -0.46
OPTN-208ENST00000430081 MYL3P08590 195 aa12.19□□□□□ -0.46
OPTN-208ENST00000430081 PTGS1P23219 599 aa12.19□□□□□ -0.46
OPTN-208ENST00000430081 CPT1AP50416 773 aa12.19□□□□□ -0.46
OPTN-208ENST00000430081 DUSP28Q4G0W2 176 aa12.19□□□□□ -0.46
OPTN-208ENST00000430081 FAM47CQ5HY64 1035 aa12.19□□□□□ -0.46
OPTN-208ENST00000430081 TMEM31Q5JXX7 168 aa12.19□□□□□ -0.46
OPTN-208ENST00000430081 NSMFQ6X4W1 530 aa12.19□□□□□ -0.46
OPTN-208ENST00000430081 IFNL3Q8IZI9 196 aa12.19□□□□□ -0.46
OPTN-208ENST00000430081 ARNTL2Q8WYA1 636 aa12.19□□□□□ -0.46
OPTN-208ENST00000430081 HLA-CQ95604 372 aa12.19□□□□□ -0.46
OPTN-208ENST00000430081 MTG1Q9BT17 334 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms