RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 GOLGA6AQ9NYA3 693 aa13.92□□□□□ -0.18
CDH3-202ENST00000429102 SLIT3O75094 1523 aa13.92□□□□□ -0.18
CDH3-202ENST00000429102 USP14P54578 494 aa13.92□□□□□ -0.18
CDH3-202ENST00000429102 FER1L4A9Z1Z3 1794 aa13.92□□□□□ -0.18
CDH3-202ENST00000429102 CAMTA1Q9Y6Y1 1673 aa13.92□□□□□ -0.18
CDH3-202ENST00000429102 UBXN6Q9BZV1 441 aa13.92□□□□□ -0.18
CDH3-202ENST00000429102 HAUS4Q9H6D7 363 aa13.92□□□□□ -0.18
CDH3-202ENST00000429102 BCCIPQ9P287 314 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDH3-202ENST00000429102 SRP68Q9UHB9 627 aaKnown RBP13.92□□□□□ -0.18
CDH3-202ENST00000429102 MINPP1Q9UNW1 487 aa13.92□□□□□ -0.18
CDH3-202ENST00000429102 LGALS16A8MUM7 142 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 H0YHG0 523 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 ATP2C2O75185 946 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 EIF4A3P38919 411 aaKnown RBP13.91□□□□□ -0.18
CDH3-202ENST00000429102 IL6STP40189 918 aaPredicted RBP13.91□□□□□ -0.18
CDH3-202ENST00000429102 GFPT1Q06210 699 aaPredicted RBP13.91□□□□□ -0.18
CDH3-202ENST00000429102 ITPK1Q13572 414 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 NAALADL2Q58DX5 795 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 ADSSL1Q8N142 457 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 MSANTD4Q8NCY6 345 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 ZNF512BQ96KM6 892 aaPredicted RBP13.91□□□□□ -0.18
CDH3-202ENST00000429102 LOC102724428A0A0B4J2F2 783 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 TULP2O00295 520 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 FTCDO95954 541 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 SLURP2P0DP57 97 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 KIF5BP33176 963 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 SIK1P57059 783 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 KRT83P78385 493 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 FAM71BQ8TC56 605 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 MST1RQ04912 1400 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 BACH1O14867 736 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 BMP15O95972 392 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 HIBADHP31937 336 aaKnown RBP13.91□□□□□ -0.18
CDH3-202ENST00000429102 PFKFB3Q16875 520 aaPredicted RBP13.91□□□□□ -0.18
CDH3-202ENST00000429102 MAP9Q49MG5 647 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 CCDC70Q6NSX1 233 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 BCAS4Q8TDM0 211 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 CCDC47Q96A33 483 aaKnown RBP13.91□□□□□ -0.18
CDH3-202ENST00000429102 COA7Q96BR5 231 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 CCDC51Q96ER9 411 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 RAB21Q9UL25 225 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 PNPLA7Q6ZV29 1317 aa13.91□□□□□ -0.18
CDH3-202ENST00000429102 POTEMA6NI47 508 aa13.9□□□□□ -0.18
CDH3-202ENST00000429102 SYF2O95926 243 aaKnown RBP13.9□□□□□ -0.18
CDH3-202ENST00000429102 PICALMQ13492 652 aa13.9□□□□□ -0.18
CDH3-202ENST00000429102 TRMT1LQ7Z2T5 733 aaKnown RBP13.9□□□□□ -0.18
CDH3-202ENST00000429102 KLHL7Q8IXQ5 586 aa13.9□□□□□ -0.18
CDH3-202ENST00000429102 SMCO2A6NFE2 343 aa13.9□□□□□ -0.18
CDH3-202ENST00000429102 HPDP32754 393 aaPredicted RBP13.9□□□□□ -0.18
CDH3-202ENST00000429102 GTF2A1P52655 376 aaPredicted RBP13.9□□□□□ -0.18
CDH3-202ENST00000429102 FAM76AQ8TAV0 307 aa13.9□□□□□ -0.18
CDH3-202ENST00000429102 HPCAL4Q9UM19 191 aa13.9□□□□□ -0.18
CDH3-202ENST00000429102 ZNF335Q9H4Z2 1342 aaPredicted RBP13.9□□□□□ -0.18
CDH3-202ENST00000429102 KRT14P02533 472 aa13.9□□□□□ -0.18
CDH3-202ENST00000429102 CALM1P0DP23 149 aa13.9□□□□□ -0.18
CDH3-202ENST00000429102 CALM2P0DP24 149 aa13.9□□□□□ -0.18
CDH3-202ENST00000429102 CALM3P0DP25 149 aa13.9□□□□□ -0.18
CDH3-202ENST00000429102 MAGEA1P43355 309 aa13.9□□□□□ -0.18
CDH3-202ENST00000429102 TNNI2P48788 182 aa13.9□□□□□ -0.18
CDH3-202ENST00000429102 GNGT1P63211 74 aa13.9□□□□□ -0.18
CDH3-202ENST00000429102 AMPD2Q01433 879 aa13.9□□□□□ -0.18
CDH3-202ENST00000429102 PDCLQ13371 301 aa13.9□□□□□ -0.18
CDH3-202ENST00000429102 GRIK5Q16478 980 aa13.9□□□□□ -0.18
CDH3-202ENST00000429102 SOGA3Q5TF21 947 aa13.9□□□□□ -0.18
CDH3-202ENST00000429102 TRAPPC11Q7Z392 1133 aa13.9□□□□□ -0.18
CDH3-202ENST00000429102 SH3RF3Q8TEJ3 882 aaPredicted RBP13.9□□□□□ -0.18
CDH3-202ENST00000429102 KLRF2D3W0D1 207 aa13.89□□□□□ -0.19
CDH3-202ENST00000429102 NOC3LQ8WTT2 800 aaKnown RBP13.89□□□□□ -0.19
CDH3-202ENST00000429102 NSUN4Q96CB9 384 aaKnown RBP13.89□□□□□ -0.19
CDH3-202ENST00000429102 GPCPD1Q9NPB8 672 aa13.89□□□□□ -0.19
CDH3-202ENST00000429102 IVLP07476 585 aa13.89□□□□□ -0.19
CDH3-202ENST00000429102 DNM2P50570 870 aa13.89□□□□□ -0.19
CDH3-202ENST00000429102 HLTFQ14527 1009 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDH3-202ENST00000429102 TRADDQ15628 312 aa13.89□□□□□ -0.19
CDH3-202ENST00000429102 PCDHA6Q9UN73 950 aa13.89□□□□□ -0.19
CDH3-202ENST00000429102 PCDHA4Q9UN74 947 aa13.89□□□□□ -0.19
CDH3-202ENST00000429102 PCDHA8Q9Y5H6 950 aa13.89□□□□□ -0.19
CDH3-202ENST00000429102 ZNF263O14978 683 aa13.89□□□□□ -0.19
CDH3-202ENST00000429102 CYTH3O43739 400 aa13.89□□□□□ -0.19
CDH3-202ENST00000429102 USO1O60763 962 aaKnown RBP13.89□□□□□ -0.19
CDH3-202ENST00000429102 TTC31Q49AM3 519 aaPredicted RBP13.89□□□□□ -0.19
CDH3-202ENST00000429102 INTS5Q6P9B9 1019 aaKnown RBP13.89□□□□□ -0.19
CDH3-202ENST00000429102 TNFRSF25Q93038 417 aa13.89□□□□□ -0.19
CDH3-202ENST00000429102 P2RX5Q93086 422 aa13.89□□□□□ -0.19
CDH3-202ENST00000429102 IL17RBQ9NRM6 502 aa13.89□□□□□ -0.19
CDH3-202ENST00000429102 TACC1O75410 805 aa13.88□□□□□ -0.19
CDH3-202ENST00000429102 SPTY2D1Q68D10 685 aaPredicted RBP13.88□□□□□ -0.19
CDH3-202ENST00000429102 POTEDQ86YR6 584 aa13.88□□□□□ -0.19
CDH3-202ENST00000429102 ARL8AQ96BM9 186 aa13.88□□□□□ -0.19
CDH3-202ENST00000429102 DUSP9Q99956 384 aaKnown RBP13.88□□□□□ -0.19
CDH3-202ENST00000429102 TSPYL1Q9H0U9 437 aa13.88□□□□□ -0.19
CDH3-202ENST00000429102 MYH8P13535 1937 aa13.88□□□□□ -0.19
CDH3-202ENST00000429102 CALML3P27482 149 aa13.88□□□□□ -0.19
CDH3-202ENST00000429102 DDB1Q16531 1140 aa13.88□□□□□ -0.19
CDH3-202ENST00000429102 CCDC40Q4G0X9 1142 aa13.88□□□□□ -0.19
CDH3-202ENST00000429102 PACS2Q86VP3 889 aa13.88□□□□□ -0.19
CDH3-202ENST00000429102 NBPF5PQ86XG9 351 aaPredicted RBP13.88□□□□□ -0.19
CDH3-202ENST00000429102 TBCKQ8TEA7 893 aa13.88□□□□□ -0.19
CDH3-202ENST00000429102 LRRC53A6NM62 1247 aa13.88□□□□□ -0.19
CDH3-202ENST00000429102 TRAF5O00463 557 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms