RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 PPP1R11O60927 126 aaPredicted RBP25.88■■□□□ 1.73
PTPN18-205ENST00000428843 ADORA2AP29274 412 aa25.88■■□□□ 1.73
PTPN18-205ENST00000428843 MAP2K5Q13163 448 aa25.88■■□□□ 1.73
PTPN18-205ENST00000428843 RABEP1Q15276 862 aa25.88■■□□□ 1.73
PTPN18-205ENST00000428843 NOL8Q76FK4 1167 aaKnown RBP25.88■■□□□ 1.73
PTPN18-205ENST00000428843 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.88■■□□□ 1.73
PTPN18-205ENST00000428843 RAET1EQ8TD07 263 aa25.88■■□□□ 1.73
PTPN18-205ENST00000428843 RRP36Q96EU6 259 aaKnown RBP25.88■■□□□ 1.73
PTPN18-205ENST00000428843 CNTNAP5Q8WYK1 1306 aa25.88■■□□□ 1.73
PTPN18-205ENST00000428843 PNMA6FA0A0J9YX94 578 aa25.87■■□□□ 1.73
PTPN18-205ENST00000428843 FUT2Q10981 343 aa25.87■■□□□ 1.73
PTPN18-205ENST00000428843 STK3Q13188 491 aa25.87■■□□□ 1.73
PTPN18-205ENST00000428843 IRF5Q13568 498 aa25.87■■□□□ 1.73
PTPN18-205ENST00000428843 KCTD2Q14681 263 aa25.87■■□□□ 1.73
PTPN18-205ENST00000428843 AMNQ9BXJ7 453 aa25.87■■□□□ 1.73
PTPN18-205ENST00000428843 NCOA5Q9HCD5 579 aaKnown RBP25.87■■□□□ 1.73
PTPN18-205ENST00000428843 CYP2B6P20813 491 aa25.86■■□□□ 1.73
PTPN18-205ENST00000428843 RGS2P41220 211 aa25.86■■□□□ 1.73
PTPN18-205ENST00000428843 CLEC4DQ8WXI8 215 aa25.86■■□□□ 1.73
PTPN18-205ENST00000428843 ABCB11O95342 1321 aa25.86■■□□□ 1.73
PTPN18-205ENST00000428843 hCG_1642624A0A1W2PR95 340 aa25.85■■□□□ 1.73
PTPN18-205ENST00000428843 ANKRD35Q8N283 1001 aa25.85■■□□□ 1.73
PTPN18-205ENST00000428843 SEC63Q9UGP8 760 aaKnown RBP25.85■■□□□ 1.73
PTPN18-205ENST00000428843 PLXNA1Q9UIW2 1896 aa25.85■■□□□ 1.73
PTPN18-205ENST00000428843 NFIBO00712 420 aa25.84■■□□□ 1.73
PTPN18-205ENST00000428843 COBLO75128 1261 aa25.84■■□□□ 1.73
PTPN18-205ENST00000428843 PGK2P07205 417 aa25.84■■□□□ 1.73
PTPN18-205ENST00000428843 DPP9Q86TI2 863 aa25.84■■□□□ 1.73
PTPN18-205ENST00000428843 NPLOC4Q8TAT6 608 aa25.84■■□□□ 1.73
PTPN18-205ENST00000428843 DDX11Q96FC9 970 aa25.84■■□□□ 1.73
PTPN18-205ENST00000428843 APBA2Q99767 749 aa25.84■■□□□ 1.73
PTPN18-205ENST00000428843 SLKQ9H2G2 1235 aaPredicted RBP25.84■■□□□ 1.73
PTPN18-205ENST00000428843 A1CFQ9NQ94 594 aaKnown RBP25.84■■□□□ 1.73
PTPN18-205ENST00000428843 ADCY3O60266 1144 aa25.83■■□□□ 1.73
PTPN18-205ENST00000428843 PFKFB2O60825 505 aa25.83■■□□□ 1.73
PTPN18-205ENST00000428843 LARGE1O95461 756 aa25.83■■□□□ 1.73
PTPN18-205ENST00000428843 XRCC5P13010 732 aaKnown RBP25.83■■□□□ 1.73
PTPN18-205ENST00000428843 NTRK3Q16288 839 aa25.83■■□□□ 1.73
PTPN18-205ENST00000428843 MRPL11Q9Y3B7 192 aaKnown RBP25.83■■□□□ 1.73
PTPN18-205ENST00000428843 PCDHA1Q9Y5I3 950 aa25.83■■□□□ 1.73
PTPN18-205ENST00000428843 RBBP6Q7Z6E9 1792 aaKnown RBP25.82■■□□□ 1.72
PTPN18-205ENST00000428843 DNAJC25-GNG10A0A024R161 153 aa25.82■■□□□ 1.72
PTPN18-205ENST00000428843 HOXC6P09630 235 aa25.82■■□□□ 1.72
PTPN18-205ENST00000428843 SCRN1Q12765 414 aa25.82■■□□□ 1.72
PTPN18-205ENST00000428843 TRAF1Q13077 416 aa25.82■■□□□ 1.72
PTPN18-205ENST00000428843 ME3Q16798 604 aa25.82■■□□□ 1.72
PTPN18-205ENST00000428843 NSMFQ6X4W1 530 aa25.82■■□□□ 1.72
PTPN18-205ENST00000428843 CYP39A1Q9NYL5 469 aa25.82■■□□□ 1.72
PTPN18-205ENST00000428843 V9GY48 417 aaPredicted RBP25.82■■□□□ 1.72
PTPN18-205ENST00000428843 ELNP15502 786 aa25.81■■□□□ 1.72
PTPN18-205ENST00000428843 IFNAR1P17181 557 aa25.81■■□□□ 1.72
PTPN18-205ENST00000428843 GRK4P32298 578 aa25.81■■□□□ 1.72
PTPN18-205ENST00000428843 CCL14Q16627 93 aa25.81■■□□□ 1.72
PTPN18-205ENST00000428843 SLAIN1Q8ND83 568 aa25.81■■□□□ 1.72
PTPN18-205ENST00000428843 PXYLP1Q8TE99 480 aa25.81■■□□□ 1.72
PTPN18-205ENST00000428843 SLC5A4Q9NY91 659 aa25.81■■□□□ 1.72
PTPN18-205ENST00000428843 LIMCH1Q9UPQ0 1083 aa25.81■■□□□ 1.72
PTPN18-205ENST00000428843 PFASO15067 1338 aa25.81■■□□□ 1.72
PTPN18-205ENST00000428843 ZNF792Q3KQV3 632 aa25.8■■□□□ 1.72
PTPN18-205ENST00000428843 SH3TC2Q8TF17 1288 aa25.8■■□□□ 1.72
PTPN18-205ENST00000428843 PHKBQ93100 1093 aa25.8■■□□□ 1.72
PTPN18-205ENST00000428843 LCTP09848 1927 aa25.8■■□□□ 1.72
PTPN18-205ENST00000428843 CPLX1O14810 134 aa25.79■■□□□ 1.72
PTPN18-205ENST00000428843 ST18O60284 1047 aa25.79■■□□□ 1.72
PTPN18-205ENST00000428843 PPFIA3O75145 1194 aa25.79■■□□□ 1.72
PTPN18-205ENST00000428843 BAATQ14032 418 aaPredicted RBP25.79■■□□□ 1.72
PTPN18-205ENST00000428843 SLC9C1Q4G0N8 1177 aa25.79■■□□□ 1.72
PTPN18-205ENST00000428843 NECAB1Q8N987 351 aa25.79■■□□□ 1.72
PTPN18-205ENST00000428843 IL27Q8NEV9 243 aa25.79■■□□□ 1.72
PTPN18-205ENST00000428843 TRIB2Q92519 343 aa25.79■■□□□ 1.72
PTPN18-205ENST00000428843 FLRT1Q9NZU1 646 aa25.79■■□□□ 1.72
PTPN18-205ENST00000428843 PTPDC1A2A3K4 754 aa25.78■■□□□ 1.72
PTPN18-205ENST00000428843 POTEB2H3BUK9 544 aa25.78■■□□□ 1.72
PTPN18-205ENST00000428843 OPLAHO14841 1288 aa25.78■■□□□ 1.72
PTPN18-205ENST00000428843 PRPF3O43395 683 aaKnown RBP25.78■■□□□ 1.72
PTPN18-205ENST00000428843 CNTN2Q02246 1040 aa25.78■■□□□ 1.72
PTPN18-205ENST00000428843 CPLX2Q6PUV4 134 aaKnown RBP25.78■■□□□ 1.72
PTPN18-205ENST00000428843 SLC30A10Q6XR72 485 aa25.78■■□□□ 1.72
PTPN18-205ENST00000428843 RNF207Q6ZRF8 634 aa25.78■■□□□ 1.72
PTPN18-205ENST00000428843 TRMT44Q8IYL2 757 aaKnown RBP25.78■■□□□ 1.72
PTPN18-205ENST00000428843 RGS22Q8NE09 1264 aa25.78■■□□□ 1.72
PTPN18-205ENST00000428843 TBC1D5Q92609 795 aa25.78■■□□□ 1.72
PTPN18-205ENST00000428843 GPKOWQ92917 476 aaPredicted RBP eCLIP25.78■■□□□ 1.72
PTPN18-205ENST00000428843 MAML3Q96JK9 1138 aa25.78■■□□□ 1.72
PTPN18-205ENST00000428843 SLC26A6Q9BXS9 759 aa25.78■■□□□ 1.72
PTPN18-205ENST00000428843 DIS3Q9Y2L1 958 aaKnown RBP25.78■■□□□ 1.72
PTPN18-205ENST00000428843 HEATR3Q7Z4Q2 680 aa25.77■■□□□ 1.72
PTPN18-205ENST00000428843 MCF2L2Q86YR7 1114 aa25.77■■□□□ 1.72
PTPN18-205ENST00000428843 FAM133AQ8N9E0 248 aa25.77■■□□□ 1.72
PTPN18-205ENST00000428843 GTF3C6Q969F1 213 aa25.77■■□□□ 1.72
PTPN18-205ENST00000428843 RNF26Q9BY78 433 aaPredicted RBP25.77■■□□□ 1.72
PTPN18-205ENST00000428843 CALML3P27482 149 aa25.76■■□□□ 1.71
PTPN18-205ENST00000428843 RPS6P62753 249 aaKnown RBP25.76■■□□□ 1.71
PTPN18-205ENST00000428843 AKAP17AQ02040 695 aaKnown RBP25.76■■□□□ 1.71
PTPN18-205ENST00000428843 SSRP1Q08945 709 aaKnown RBP25.76■■□□□ 1.71
PTPN18-205ENST00000428843 PFKFB3Q16875 520 aaPredicted RBP25.76■■□□□ 1.71
PTPN18-205ENST00000428843 WWC2Q6AWC2 1192 aa25.76■■□□□ 1.71
PTPN18-205ENST00000428843 TNS4Q8IZW8 715 aa25.76■■□□□ 1.71
PTPN18-205ENST00000428843 FGD4Q96M96 766 aa25.76■■□□□ 1.71
PTPN18-205ENST00000428843 MAF1Q9H063 256 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms