RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 STK36Q9NRP7 1315 aa10.93□□□□□ -0.66
HMGCLL1-206ENST00000428842 WDR46O15213 610 aaKnown RBP10.93□□□□□ -0.66
HMGCLL1-206ENST00000428842 TOMM70O94826 608 aa10.93□□□□□ -0.66
HMGCLL1-206ENST00000428842 RCAN1P53805 252 aa10.93□□□□□ -0.66
HMGCLL1-206ENST00000428842 SNRNP48Q6IEG0 339 aaKnown RBP10.93□□□□□ -0.66
HMGCLL1-206ENST00000428842 NOSTRINQ8IVI9 506 aa10.93□□□□□ -0.66
HMGCLL1-206ENST00000428842 ANKRD13CQ8N6S4 541 aa10.93□□□□□ -0.66
HMGCLL1-206ENST00000428842 PRPF38AQ8NAV1 312 aaKnown RBP10.93□□□□□ -0.66
HMGCLL1-206ENST00000428842 MTMR8Q96EF0 704 aa10.93□□□□□ -0.66
HMGCLL1-206ENST00000428842 CLIC6Q96NY7 704 aa10.93□□□□□ -0.66
HMGCLL1-206ENST00000428842 MAP3K14Q99558 947 aa10.93□□□□□ -0.66
HMGCLL1-206ENST00000428842 MYH7BA7E2Y1 1941 aa10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 PDHXO00330 501 aa10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 MEIS2O14770 477 aa10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 PDCP20941 246 aa10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 GNAQP50148 359 aa10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 NSMFQ6X4W1 530 aa10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 RASAL3Q86YV0 1011 aa10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 BLIDQ8IZY5 108 aa10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 TNFRSF25Q93038 417 aa10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 SH2D4AQ9H788 454 aa10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 ZNF214Q9UL59 606 aaPredicted RBP10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 MCM7P33993 719 aa10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 PPIL2Q13356 520 aa10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 COG2Q14746 738 aa10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 SF3A1Q15459 793 aaKnown RBP10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 MYSM1Q5VVJ2 828 aa10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 BTNL9Q6UXG8 535 aa10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 PORCNQ9H237 461 aa10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 RANBP17Q9H2T7 1088 aaKnown RBP10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 PSTPIP2Q9H939 334 aa10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 SLC38A10Q9HBR0 1119 aa10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 RBM27Q9P2N5 1060 aaKnown RBP10.92□□□□□ -0.66
HMGCLL1-206ENST00000428842 GOLGA6L3A6NEY3 463 aa10.91□□□□□ -0.66
HMGCLL1-206ENST00000428842 M0R2N6 131 aa10.91□□□□□ -0.66
HMGCLL1-206ENST00000428842 PGK2P07205 417 aa10.91□□□□□ -0.66
HMGCLL1-206ENST00000428842 CALML3P27482 149 aa10.91□□□□□ -0.66
HMGCLL1-206ENST00000428842 KRT2P35908 639 aa10.91□□□□□ -0.66
HMGCLL1-206ENST00000428842 HERVK_113P62684 666 aa10.91□□□□□ -0.66
HMGCLL1-206ENST00000428842 SMC1BQ8NDV3 1235 aa10.91□□□□□ -0.66
HMGCLL1-206ENST00000428842 IL31RAQ8NI17 732 aa10.91□□□□□ -0.66
HMGCLL1-206ENST00000428842 LPAR1Q92633 364 aa10.91□□□□□ -0.66
HMGCLL1-206ENST00000428842 ERCC4Q92889 916 aaPredicted RBP10.91□□□□□ -0.66
HMGCLL1-206ENST00000428842 AMNQ9BXJ7 453 aa10.91□□□□□ -0.66
HMGCLL1-206ENST00000428842 PANK2Q9BZ23 570 aa10.91□□□□□ -0.66
HMGCLL1-206ENST00000428842 CPA4Q9UI42 421 aa10.91□□□□□ -0.66
HMGCLL1-206ENST00000428842 TSKSQ9UJT2 592 aa10.91□□□□□ -0.66
HMGCLL1-206ENST00000428842 FEM1BQ9UK73 627 aa10.91□□□□□ -0.66
HMGCLL1-206ENST00000428842 FAM155AB1AL88 458 aaPredicted RBP10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 TDP2O95551 362 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 XRCC6P12956 609 aaKnown RBP eCLIP10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 U2AF2P26368 475 aaKnown RBP eCLIP10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 DSG3P32926 999 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 USP14P54578 494 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 IRX3P78415 501 aaPredicted RBP10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 CAP1Q01518 475 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 CNTN2Q02246 1040 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 PPP2R5BQ15173 497 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 LETM2Q2VYF4 491 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 USP49Q70CQ1 688 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 REPS2Q8NFH8 660 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 TBCKQ8TEA7 893 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 CHURC1Q8WUH1 139 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 ZMYND12Q9H0C1 365 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 EFCC1Q9HA90 598 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 PKD2L1Q9P0L9 805 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 RBPJLQ9UBG7 517 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 PCDHA4Q9UN74 947 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 KCNH4Q9UQ05 1017 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 MYH15Q9Y2K3 1946 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 A0A087WWV3 80 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 ADCY7P51828 1080 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 SNAPC2Q13487 334 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 RGMBQ6NW40 437 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 CLEC4DQ8WXI8 215 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 BCAS3Q9H6U6 928 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 RTEL1Q9NZ71 1219 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 ZSWIM8A7E2V4 1837 aa10.9□□□□□ -0.66
HMGCLL1-206ENST00000428842 MCM3APO60318 1980 aa10.9□□□□□ -0.67
HMGCLL1-206ENST00000428842 TMEM88BA6NKF7 163 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 C19orf81C9J6K1 198 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 SLC37A4O43826 429 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 CNMDO75829 334 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 PTMSP20962 102 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 SH3D19Q5HYK7 790 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 CLEC17AQ6ZS10 378 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 SMCR8Q8TEV9 937 aaPredicted RBP10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 TRERF1Q96PN7 1200 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 TMEM60Q9H2L4 133 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 AGTPBP1Q9UPW5 1226 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 TELO2Q9Y4R8 837 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 PP2D1A8MPX8 630 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 EEPD1Q7L9B9 569 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 NCAPG2Q86XI2 1143 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 REXO1Q8N1G1 1221 aaKnown RBP10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 GPT2Q8TD30 523 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 LEO1Q8WVC0 666 aaPredicted RBP10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 WASF1Q92558 559 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 GBP4Q96PP9 640 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 LZTS2Q9BRK4 669 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms