RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 FRAT1Q92837 279 aaPredicted RBP13.97□□□□□ -0.17
ALMS1P1-201ENST00000428767 KIFC2Q96AC6 838 aa13.97□□□□□ -0.17
ALMS1P1-201ENST00000428767 FBXL18Q96ME1 805 aa13.97□□□□□ -0.17
ALMS1P1-201ENST00000428767 DNAJC2Q99543 621 aaKnown RBP13.97□□□□□ -0.17
ALMS1P1-201ENST00000428767 ALDH8A1Q9H2A2 487 aaPredicted RBP13.97□□□□□ -0.17
ALMS1P1-201ENST00000428767 GNEQ9Y223 722 aaKnown RBP13.97□□□□□ -0.17
ALMS1P1-201ENST00000428767 CFAP54Q96N23 3096 aa13.96□□□□□ -0.17
ALMS1P1-201ENST00000428767 TCRBV5S4A2TA0A5A2 114 aa13.96□□□□□ -0.17
ALMS1P1-201ENST00000428767 ZEB2O60315 1214 aa13.96□□□□□ -0.17
ALMS1P1-201ENST00000428767 NDUFB10O96000 172 aa13.96□□□□□ -0.17
ALMS1P1-201ENST00000428767 SMPD1P17405 629 aa13.96□□□□□ -0.17
ALMS1P1-201ENST00000428767 TMEM63BQ5T3F8 832 aa13.96□□□□□ -0.17
ALMS1P1-201ENST00000428767 C12orf60Q5U649 245 aa13.96□□□□□ -0.17
ALMS1P1-201ENST00000428767 HERC6Q8IVU3 1022 aa13.96□□□□□ -0.17
ALMS1P1-201ENST00000428767 FAM178BQ8IXR5 827 aa13.96□□□□□ -0.17
ALMS1P1-201ENST00000428767 AMOTL1Q8IY63 956 aa13.96□□□□□ -0.17
ALMS1P1-201ENST00000428767 PRPF38AQ8NAV1 312 aaKnown RBP13.96□□□□□ -0.17
ALMS1P1-201ENST00000428767 PPP1R13LQ8WUF5 828 aa13.96□□□□□ -0.17
ALMS1P1-201ENST00000428767 FTOQ9C0B1 505 aaKnown RBP eCLIP13.96□□□□□ -0.17
ALMS1P1-201ENST00000428767 UBE2ZQ9H832 354 aaPredicted RBP13.96□□□□□ -0.17
ALMS1P1-201ENST00000428767 MTUS1Q9ULD2 1270 aa13.96□□□□□ -0.17
ALMS1P1-201ENST00000428767 TNKSO95271 1327 aa13.95□□□□□ -0.18
ALMS1P1-201ENST00000428767 SCN10AQ9Y5Y9 1956 aa13.95□□□□□ -0.18
ALMS1P1-201ENST00000428767 LCHNA4D1U4 455 aa13.95□□□□□ -0.18
ALMS1P1-201ENST00000428767 KIF28PB7ZC32 967 aa13.95□□□□□ -0.18
ALMS1P1-201ENST00000428767 USP17L12C9JPN9 530 aa13.95□□□□□ -0.18
ALMS1P1-201ENST00000428767 USP17L21D6R901 530 aa13.95□□□□□ -0.18
ALMS1P1-201ENST00000428767 GOLIM4O00461 696 aa13.95□□□□□ -0.18
ALMS1P1-201ENST00000428767 IL9P15248 144 aa13.95□□□□□ -0.18
ALMS1P1-201ENST00000428767 KCNA5P22460 613 aa13.95□□□□□ -0.18
ALMS1P1-201ENST00000428767 TTF1Q15361 905 aaPredicted RBP13.95□□□□□ -0.18
ALMS1P1-201ENST00000428767 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.95□□□□□ -0.18
ALMS1P1-201ENST00000428767 EEPD1Q7L9B9 569 aa13.95□□□□□ -0.18
ALMS1P1-201ENST00000428767 FBXO16Q8IX29 292 aaPredicted RBP13.95□□□□□ -0.18
ALMS1P1-201ENST00000428767 STK11IPQ8N1F8 1099 aa13.95□□□□□ -0.18
ALMS1P1-201ENST00000428767 PDGFCQ9NRA1 345 aa13.95□□□□□ -0.18
ALMS1P1-201ENST00000428767 FBXO40Q9UH90 709 aa13.95□□□□□ -0.18
ALMS1P1-201ENST00000428767 SOWAHBA6NEL2 793 aa13.94□□□□□ -0.18
ALMS1P1-201ENST00000428767 ATP2A1O14983 1001 aa13.94□□□□□ -0.18
ALMS1P1-201ENST00000428767 FAM47CQ5HY64 1035 aa13.94□□□□□ -0.18
ALMS1P1-201ENST00000428767 TMCO2Q7Z6W1 182 aaPredicted RBP13.94□□□□□ -0.18
ALMS1P1-201ENST00000428767 TMEM57Q8N5G2 664 aa13.94□□□□□ -0.18
ALMS1P1-201ENST00000428767 FAM133AQ8N9E0 248 aa13.94□□□□□ -0.18
ALMS1P1-201ENST00000428767 CHST13Q8NET6 341 aa13.94□□□□□ -0.18
ALMS1P1-201ENST00000428767 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.94□□□□□ -0.18
ALMS1P1-201ENST00000428767 BCL11AQ9H165 835 aa13.94□□□□□ -0.18
ALMS1P1-201ENST00000428767 SLC38A10Q9HBR0 1119 aa13.94□□□□□ -0.18
ALMS1P1-201ENST00000428767 ATP8A2Q9NTI2 1148 aa13.94□□□□□ -0.18
ALMS1P1-201ENST00000428767 NOP58Q9Y2X3 529 aaKnown RBP13.94□□□□□ -0.18
ALMS1P1-201ENST00000428767 ZNF536O15090 1300 aa13.93□□□□□ -0.18
ALMS1P1-201ENST00000428767 F5H6K3 240 aa13.93□□□□□ -0.18
ALMS1P1-201ENST00000428767 KLRC3Q07444 240 aa13.93□□□□□ -0.18
ALMS1P1-201ENST00000428767 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.93□□□□□ -0.18
ALMS1P1-201ENST00000428767 PHOSPHO2Q8TCD6 241 aa13.93□□□□□ -0.18
ALMS1P1-201ENST00000428767 ANKS1AQ92625 1134 aa13.93□□□□□ -0.18
ALMS1P1-201ENST00000428767 YTHDC1Q96MU7 727 aaKnown RBP13.93□□□□□ -0.18
ALMS1P1-201ENST00000428767 SEZ6LQ9BYH1 1024 aa13.93□□□□□ -0.18
ALMS1P1-201ENST00000428767 ACAD9Q9H845 621 aa13.93□□□□□ -0.18
ALMS1P1-201ENST00000428767 IL1RAPL2Q9NP60 686 aa13.93□□□□□ -0.18
ALMS1P1-201ENST00000428767 ISY1Q9ULR0 285 aaKnown RBP13.93□□□□□ -0.18
ALMS1P1-201ENST00000428767 COG6Q9Y2V7 657 aa13.93□□□□□ -0.18
ALMS1P1-201ENST00000428767 ASB14A6NK59 587 aa13.92□□□□□ -0.18
ALMS1P1-201ENST00000428767 IPO8O15397 1037 aaKnown RBP13.92□□□□□ -0.18
ALMS1P1-201ENST00000428767 MYL3P08590 195 aa13.92□□□□□ -0.18
ALMS1P1-201ENST00000428767 SUPT20HL2P0C7V6 817 aa13.92□□□□□ -0.18
ALMS1P1-201ENST00000428767 ALADP13716 330 aa13.92□□□□□ -0.18
ALMS1P1-201ENST00000428767 KCNJ6P48051 423 aa13.92□□□□□ -0.18
ALMS1P1-201ENST00000428767 LEXMQ3ZCV2 418 aa13.92□□□□□ -0.18
ALMS1P1-201ENST00000428767 PTCRAQ6ISU1 281 aaPredicted RBP13.92□□□□□ -0.18
ALMS1P1-201ENST00000428767 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.92□□□□□ -0.18
ALMS1P1-201ENST00000428767 PHOX2BQ99453 314 aa13.92□□□□□ -0.18
ALMS1P1-201ENST00000428767 A1CFQ9NQ94 594 aaKnown RBP13.92□□□□□ -0.18
ALMS1P1-201ENST00000428767 RNF146Q9NTX7 359 aa13.92□□□□□ -0.18
ALMS1P1-201ENST00000428767 EXOC6BQ9Y2D4 811 aa13.92□□□□□ -0.18
ALMS1P1-201ENST00000428767 RBAK-RBAKDNI3L0D1 243 aa13.91□□□□□ -0.18
ALMS1P1-201ENST00000428767 DCXO43602 365 aa13.91□□□□□ -0.18
ALMS1P1-201ENST00000428767 CHGBP05060 677 aa13.91□□□□□ -0.18
ALMS1P1-201ENST00000428767 RFC2P35250 354 aa13.91□□□□□ -0.18
ALMS1P1-201ENST00000428767 TAPT1Q6NXT6 567 aa13.91□□□□□ -0.18
ALMS1P1-201ENST00000428767 CHMP4CQ96CF2 233 aa13.91□□□□□ -0.18
ALMS1P1-201ENST00000428767 ZBED2Q9BTP6 218 aa13.91□□□□□ -0.18
ALMS1P1-201ENST00000428767 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.9□□□□□ -0.18
ALMS1P1-201ENST00000428767 IQCF3P0C7M6 154 aa13.9□□□□□ -0.18
ALMS1P1-201ENST00000428767 ADD2P35612 726 aa13.9□□□□□ -0.18
ALMS1P1-201ENST00000428767 WDR5P61964 334 aaKnown RBP13.9□□□□□ -0.18
ALMS1P1-201ENST00000428767 DEFB103AP81534 67 aa13.9□□□□□ -0.18
ALMS1P1-201ENST00000428767 IQSEC1Q6DN90 963 aa13.9□□□□□ -0.18
ALMS1P1-201ENST00000428767 CTR9Q6PD62 1173 aa13.9□□□□□ -0.18
ALMS1P1-201ENST00000428767 KIAA1211Q6ZU35 1233 aa13.9□□□□□ -0.18
ALMS1P1-201ENST00000428767 RETREG2Q8NC44 543 aa13.9□□□□□ -0.18
ALMS1P1-201ENST00000428767 DDRGK1Q96HY6 314 aa13.9□□□□□ -0.18
ALMS1P1-201ENST00000428767 SUGCTQ9HAC7 445 aa13.9□□□□□ -0.18
ALMS1P1-201ENST00000428767 POLR3EQ9NVU0 708 aa13.9□□□□□ -0.18
ALMS1P1-201ENST00000428767 LMCD1Q9NZU5 365 aa13.9□□□□□ -0.18
ALMS1P1-201ENST00000428767 NYAP2Q9P242 653 aa13.9□□□□□ -0.18
ALMS1P1-201ENST00000428767 CLIP2Q9UDT6 1046 aa13.9□□□□□ -0.18
ALMS1P1-201ENST00000428767 FEM1BQ9UK73 627 aa13.9□□□□□ -0.18
ALMS1P1-201ENST00000428767 SLC4A4Q9Y6R1 1079 aa13.9□□□□□ -0.18
ALMS1P1-201ENST00000428767 NLRC5Q86WI3 1866 aa13.89□□□□□ -0.19
ALMS1P1-201ENST00000428767 H3BQ06 376 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms