RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 STAT3P40763 770 aa9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 GCLCP48506 637 aaPredicted RBP9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 NUCB2P80303 420 aa9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 LBX2Q6XYB7 198 aa9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 FERMT3Q86UX7 667 aa9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 DIS3L2Q8IYB7 885 aaKnown RBP9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 REXO1Q8N1G1 1221 aaKnown RBP9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 REPS2Q8NFH8 660 aa9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 BICD2Q8TD16 824 aa9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 CUL5Q93034 780 aa9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 SHISA4Q96DD7 197 aa9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 PHF20Q9BVI0 1012 aa9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 PSTPIP2Q9H939 334 aa9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 ZCCHC17Q9NP64 241 aaKnown RBP9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 RNF146Q9NTX7 359 aa9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 BTBD7Q9P203 1132 aa9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 ZNF214Q9UL59 606 aaPredicted RBP9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 ADAMTS5Q9UNA0 930 aa9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 MTMR6Q9Y217 621 aa9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 MRPL11Q9Y3B7 192 aaKnown RBP9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 RABGAP1Q9Y3P9 1069 aa9.09□□□□□ -0.95
HMGA1P4-201ENST00000428643 ESYT2A0FGR8 921 aa9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 ATP2A1O14983 1001 aa9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 PEX10O60683 326 aa9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 ZSCAN22P10073 491 aaPredicted RBP9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 GNA11P29992 359 aa9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 COPB2P35606 906 aa9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 VEGFBP49765 207 aa9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 MRPL12P52815 198 aaKnown RBP9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 CCNA1P78396 465 aa9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 WDR78Q5VTH9 848 aa9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 GALNT17Q6IS24 598 aa9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 NCAPG2Q86XI2 1143 aa9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 CCAR1Q8IX12 1150 aaKnown RBP9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 REM2Q8IYK8 340 aaPredicted RBP9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 BLIDQ8IZY5 108 aa9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 ANKRD13CQ8N6S4 541 aa9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 TRERF1Q96PN7 1200 aa9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 SPATC1LQ9H0A9 340 aa9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 ZMYND12Q9H0C1 365 aa9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 GLT8D2Q9H1C3 349 aa9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 TXNRD2Q9NNW7 524 aa9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 PCDHA4Q9UN74 947 aa9.08□□□□□ -0.96
HMGA1P4-201ENST00000428643 PTPRFP10586 1907 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 CCDC194A0A1B0GVG4 234 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 GCOM1H8Y6P7 765 aaPredicted RBP9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 NFIBO00712 420 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 CNMDO75829 334 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 BRD1O95696 1058 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 ALDH1A1P00352 501 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 F13A1P00488 732 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 CFBP00751 764 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 POLR2MP0CAP2 368 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 HOXA13P31271 388 aaPredicted RBP9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 TM4SF4P48230 202 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 ERVK-9P63128 1117 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 ERVK-24P63145 666 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 NR5A1Q13285 461 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 CRHR2Q13324 411 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 UBE2SQ16763 222 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 TKFCQ3LXA3 575 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 FOXD4L6Q3SYB3 417 aaPredicted RBP9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 POTEEQ6S8J3 1075 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 FOXD4L3Q6VB84 417 aaPredicted RBP9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 NSMFQ6X4W1 530 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 MCF2L2Q86YR7 1114 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 RIOX2Q8IUF8 465 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 DAGLBQ8NCG7 672 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 GPRC5AQ8NFJ5 357 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 RASGRP4Q8TDF6 673 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 OXER1Q8TDS5 423 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 MOV10L1Q9BXT6 1211 aaKnown RBP9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 FOXP1Q9H334 677 aaPredicted RBP9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 ACAD9Q9H845 621 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 ZFYVE28Q9HCC9 887 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 RIC8AQ9NPQ8 531 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 TMEM260Q9NX78 707 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 RBPJLQ9UBG7 517 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 CPA4Q9UI42 421 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 RIPK3Q9Y572 518 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 A0A0G2JMZ2 1700 aa9.07□□□□□ -0.96
HMGA1P4-201ENST00000428643 ADGRA2Q96PE1 1338 aa9.06□□□□□ -0.96
HMGA1P4-201ENST00000428643 SPDYE3A6NKU9 549 aa9.06□□□□□ -0.96
HMGA1P4-201ENST00000428643 BTBD18B2RXH4 712 aa9.06□□□□□ -0.96
HMGA1P4-201ENST00000428643 KIF28PB7ZC32 967 aa9.06□□□□□ -0.96
HMGA1P4-201ENST00000428643 OPLAHO14841 1288 aa9.06□□□□□ -0.96
HMGA1P4-201ENST00000428643 ADAMTS3O15072 1205 aa9.06□□□□□ -0.96
HMGA1P4-201ENST00000428643 SLC25A27O95847 323 aa9.06□□□□□ -0.96
HMGA1P4-201ENST00000428643 MAP2K2P36507 400 aa9.06□□□□□ -0.96
HMGA1P4-201ENST00000428643 RESTQ13127 1097 aa9.06□□□□□ -0.96
HMGA1P4-201ENST00000428643 NPY5RQ15761 445 aa9.06□□□□□ -0.96
HMGA1P4-201ENST00000428643 FAM110CQ1W6H9 321 aa9.06□□□□□ -0.96
HMGA1P4-201ENST00000428643 MUM1L1Q5H9M0 696 aa9.06□□□□□ -0.96
HMGA1P4-201ENST00000428643 JAKMIP3Q5VZ66 844 aa9.06□□□□□ -0.96
HMGA1P4-201ENST00000428643 USP17L6PQ6QN14 398 aa9.06□□□□□ -0.96
HMGA1P4-201ENST00000428643 SLC30A10Q6XR72 485 aa9.06□□□□□ -0.96
HMGA1P4-201ENST00000428643 RNF207Q6ZRF8 634 aa9.06□□□□□ -0.96
HMGA1P4-201ENST00000428643 KRT25Q7Z3Z0 450 aa9.06□□□□□ -0.96
HMGA1P4-201ENST00000428643 NOSTRINQ8IVI9 506 aa9.06□□□□□ -0.96
HMGA1P4-201ENST00000428643 RGS22Q8NE09 1264 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms