RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 HOMER2Q9NSB8 354 aa27.21■■□□□ 1.95
GLI3-202ENST00000428534 NAP1L2Q9ULW6 460 aaPredicted RBP27.21■■□□□ 1.95
GLI3-202ENST00000428534 EVCP57679 992 aa27.2■■□□□ 1.94
GLI3-202ENST00000428534 RTN1Q16799 776 aa27.2■■□□□ 1.94
GLI3-202ENST00000428534 RRP36Q96EU6 259 aaKnown RBP27.2■■□□□ 1.94
GLI3-202ENST00000428534 C22orf23Q9BZE7 217 aa27.2■■□□□ 1.94
GLI3-202ENST00000428534 SEC63Q9UGP8 760 aaKnown RBP27.2■■□□□ 1.94
GLI3-202ENST00000428534 BRPF3Q9ULD4 1205 aa27.2■■□□□ 1.94
GLI3-202ENST00000428534 MRPL11Q9Y3B7 192 aaKnown RBP27.2■■□□□ 1.94
GLI3-202ENST00000428534 ZNF236Q9UL36 1845 aa27.2■■□□□ 1.94
GLI3-202ENST00000428534 PNMA6FA0A0J9YX94 578 aa27.19■■□□□ 1.94
GLI3-202ENST00000428534 GOLGA8AA7E2F4 631 aa27.19■■□□□ 1.94
GLI3-202ENST00000428534 GOLGA8BA8MQT2 603 aa27.19■■□□□ 1.94
GLI3-202ENST00000428534 METAP2P50579 478 aaKnown RBP eCLIP27.19■■□□□ 1.94
GLI3-202ENST00000428534 APOBRQ0VD83 1088 aa27.19■■□□□ 1.94
GLI3-202ENST00000428534 QRICH1Q2TAL8 776 aa27.19■■□□□ 1.94
GLI3-202ENST00000428534 MFSD14CQ5VZR4 134 aa27.19■■□□□ 1.94
GLI3-202ENST00000428534 OLFML2BQ68BL8 750 aa27.19■■□□□ 1.94
GLI3-202ENST00000428534 UPF3BQ9BZI7 483 aaKnown RBP27.19■■□□□ 1.94
GLI3-202ENST00000428534 MCF2L2Q86YR7 1114 aa27.18■■□□□ 1.94
GLI3-202ENST00000428534 MSL3Q8N5Y2 521 aaKnown RBP27.18■■□□□ 1.94
GLI3-202ENST00000428534 RGS22Q8NE09 1264 aa27.18■■□□□ 1.94
GLI3-202ENST00000428534 EN2P19622 333 aaPredicted RBP27.17■■□□□ 1.94
GLI3-202ENST00000428534 RXRAP19793 462 aa27.17■■□□□ 1.94
GLI3-202ENST00000428534 TMTC3Q6ZXV5 915 aa27.17■■□□□ 1.94
GLI3-202ENST00000428534 CCDC144CPQ8IYA2 1237 aa27.17■■□□□ 1.94
GLI3-202ENST00000428534 SAMD3Q8N6K7 520 aa27.17■■□□□ 1.94
GLI3-202ENST00000428534 ZNF274Q96GC6 653 aaPredicted RBP27.17■■□□□ 1.94
GLI3-202ENST00000428534 ZNF333Q96JL9 665 aa27.17■■□□□ 1.94
GLI3-202ENST00000428534 PLXNB2O15031 1838 aa27.16■■□□□ 1.94
GLI3-202ENST00000428534 CYTH3O43739 400 aa27.16■■□□□ 1.94
GLI3-202ENST00000428534 CAPN2P17655 700 aa27.16■■□□□ 1.94
GLI3-202ENST00000428534 RBM25P49756 843 aaKnown RBP27.16■■□□□ 1.94
GLI3-202ENST00000428534 ZNF792Q3KQV3 632 aa27.16■■□□□ 1.94
GLI3-202ENST00000428534 USH1GQ495M9 461 aa27.16■■□□□ 1.94
GLI3-202ENST00000428534 ZNF467Q7Z7K2 595 aaPredicted RBP27.16■■□□□ 1.94
GLI3-202ENST00000428534 HOMER1Q86YM7 354 aa27.16■■□□□ 1.94
GLI3-202ENST00000428534 SH3TC2Q8TF17 1288 aa27.16■■□□□ 1.94
GLI3-202ENST00000428534 PIGSQ96S52 555 aa27.16■■□□□ 1.94
GLI3-202ENST00000428534 NID2Q14112 1375 aa27.15■■□□□ 1.94
GLI3-202ENST00000428534 DNAJC25-GNG10A0A024R161 153 aa27.15■■□□□ 1.94
GLI3-202ENST00000428534 POTEB2H3BUK9 544 aa27.15■■□□□ 1.94
GLI3-202ENST00000428534 COBLO75128 1261 aa27.15■■□□□ 1.94
GLI3-202ENST00000428534 ELNP15502 786 aa27.15■■□□□ 1.94
GLI3-202ENST00000428534 TOB2Q14106 344 aaPredicted RBP27.15■■□□□ 1.94
GLI3-202ENST00000428534 SRBD1Q8N5C6 995 aaKnown RBP27.15■■□□□ 1.94
GLI3-202ENST00000428534 NPLOC4Q8TAT6 608 aa27.15■■□□□ 1.94
GLI3-202ENST00000428534 TMEM106CQ9BVX2 250 aa27.15■■□□□ 1.94
GLI3-202ENST00000428534 A1CFQ9NQ94 594 aaKnown RBP27.15■■□□□ 1.94
GLI3-202ENST00000428534 MAP3K20Q9NYL2 800 aaKnown RBP27.15■■□□□ 1.94
GLI3-202ENST00000428534 RBM27Q9P2N5 1060 aaKnown RBP27.15■■□□□ 1.94
GLI3-202ENST00000428534 PCDHA1Q9Y5I3 950 aa27.15■■□□□ 1.94
GLI3-202ENST00000428534 INHAP05111 366 aa27.14■■□□□ 1.94
GLI3-202ENST00000428534 NSMFQ6X4W1 530 aa27.14■■□□□ 1.94
GLI3-202ENST00000428534 TRIB2Q92519 343 aa27.14■■□□□ 1.94
GLI3-202ENST00000428534 MAML3Q96JK9 1138 aa27.14■■□□□ 1.94
GLI3-202ENST00000428534 DOCK3Q8IZD9 2030 aa27.14■■□□□ 1.93
GLI3-202ENST00000428534 LOC102724159A0A0B4J2E5 919 aa27.13■■□□□ 1.93
GLI3-202ENST00000428534 PLEKHA8P1O95397 391 aa27.13■■□□□ 1.93
GLI3-202ENST00000428534 PGK2P07205 417 aa27.13■■□□□ 1.93
GLI3-202ENST00000428534 NEK4P51957 841 aa27.13■■□□□ 1.93
GLI3-202ENST00000428534 PWP2Q15269 919 aaKnown RBP27.13■■□□□ 1.93
GLI3-202ENST00000428534 MUM1L1Q5H9M0 696 aa27.13■■□□□ 1.93
GLI3-202ENST00000428534 RNF207Q6ZRF8 634 aa27.13■■□□□ 1.93
GLI3-202ENST00000428534 RAB11FIP4Q86YS3 637 aa27.13■■□□□ 1.93
GLI3-202ENST00000428534 MPHOSPH6Q99547 160 aaKnown RBP27.13■■□□□ 1.93
GLI3-202ENST00000428534 CYP39A1Q9NYL5 469 aa27.13■■□□□ 1.93
GLI3-202ENST00000428534 ADD3Q9UEY8 706 aaKnown RBP27.13■■□□□ 1.93
GLI3-202ENST00000428534 NRBP1Q9UHY1 535 aa27.13■■□□□ 1.93
GLI3-202ENST00000428534 PTPDC1A2A3K4 754 aa27.12■■□□□ 1.93
GLI3-202ENST00000428534 B4DLN1 442 aa27.12■■□□□ 1.93
GLI3-202ENST00000428534 PDIA3P30101 505 aaKnown RBP27.12■■□□□ 1.93
GLI3-202ENST00000428534 MRPL12P52815 198 aaKnown RBP27.12■■□□□ 1.93
GLI3-202ENST00000428534 CPLX2Q6PUV4 134 aaKnown RBP27.12■■□□□ 1.93
GLI3-202ENST00000428534 CLEC4DQ8WXI8 215 aa27.12■■□□□ 1.93
GLI3-202ENST00000428534 HMX1Q9NP08 348 aaPredicted RBP27.12■■□□□ 1.93
GLI3-202ENST00000428534 PCDH10Q9P2E7 1040 aa27.12■■□□□ 1.93
GLI3-202ENST00000428534 RPTORQ8N122 1335 aa27.12■■□□□ 1.93
GLI3-202ENST00000428534 ASB14A6NK59 587 aa27.1■■□□□ 1.93
GLI3-202ENST00000428534 hCG_1984214I3L0E3 225 aa27.1■■□□□ 1.93
GLI3-202ENST00000428534 NFIBO00712 420 aa27.1■■□□□ 1.93
GLI3-202ENST00000428534 BAATQ14032 418 aaPredicted RBP27.1■■□□□ 1.93
GLI3-202ENST00000428534 CCL14Q16627 93 aa27.1■■□□□ 1.93
GLI3-202ENST00000428534 SLC35G1Q2M3R5 365 aa27.1■■□□□ 1.93
GLI3-202ENST00000428534 MAMDC4Q6UXC1 1216 aa27.1■■□□□ 1.93
GLI3-202ENST00000428534 ZNF713Q8N859 430 aaPredicted RBP27.1■■□□□ 1.93
GLI3-202ENST00000428534 FAM133AQ8N9E0 248 aa27.1■■□□□ 1.93
GLI3-202ENST00000428534 TINF2Q9BSI4 451 aa27.1■■□□□ 1.93
GLI3-202ENST00000428534 BACH2Q9BYV9 841 aa27.1■■□□□ 1.93
GLI3-202ENST00000428534 SYNGAP1Q96PV0 1343 aa27.1■■□□□ 1.93
GLI3-202ENST00000428534 MYCP01106 439 aaPredicted RBP27.09■■□□□ 1.93
GLI3-202ENST00000428534 CDC27P30260 824 aa27.09■■□□□ 1.93
GLI3-202ENST00000428534 AKAP17AQ02040 695 aaKnown RBP27.09■■□□□ 1.93
GLI3-202ENST00000428534 MAP3K21Q5TCX8 1036 aa27.09■■□□□ 1.93
GLI3-202ENST00000428534 TEX2Q8IWB9 1127 aa27.09■■□□□ 1.93
GLI3-202ENST00000428534 CCDC82Q8N4S0 544 aa27.09■■□□□ 1.93
GLI3-202ENST00000428534 FAM217BQ9NTX9 383 aaPredicted RBP27.09■■□□□ 1.93
GLI3-202ENST00000428534 CPLX1O14810 134 aa27.08■■□□□ 1.93
GLI3-202ENST00000428534 IGHA2P01877 340 aa27.08■■□□□ 1.93
GLI3-202ENST00000428534 CCL5P13501 91 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms