RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 DGKHQ86XP1 1220 aa18.17■□□□□ 0.5
CTDSP1-202ENST00000428361 DEFB123Q8N688 67 aa18.17■□□□□ 0.5
CTDSP1-202ENST00000428361 LENG1Q96BZ8 264 aaPredicted RBP18.17■□□□□ 0.5
CTDSP1-202ENST00000428361 CHMP4CQ96CF2 233 aa18.17■□□□□ 0.5
CTDSP1-202ENST00000428361 FGD4Q96M96 766 aa18.17■□□□□ 0.5
CTDSP1-202ENST00000428361 DSCC1Q9BVC3 393 aa18.17■□□□□ 0.5
CTDSP1-202ENST00000428361 SEZ6LQ9BYH1 1024 aa18.17■□□□□ 0.5
CTDSP1-202ENST00000428361 CYP39A1Q9NYL5 469 aa18.17■□□□□ 0.5
CTDSP1-202ENST00000428361 DNAH12Q6ZR08 3092 aa18.17■□□□□ 0.5
CTDSP1-202ENST00000428361 LTBP2Q14767 1821 aa18.16■□□□□ 0.5
CTDSP1-202ENST00000428361 B4DLN1 442 aa18.16■□□□□ 0.5
CTDSP1-202ENST00000428361 CABYRO75952 493 aa18.16■□□□□ 0.5
CTDSP1-202ENST00000428361 RAG1P15918 1043 aa18.16■□□□□ 0.5
CTDSP1-202ENST00000428361 MRPL12P52815 198 aaKnown RBP18.16■□□□□ 0.5
CTDSP1-202ENST00000428361 TNFAIP2Q03169 654 aa18.16■□□□□ 0.5
CTDSP1-202ENST00000428361 GNASQ5JWF2 1037 aa18.16■□□□□ 0.5
CTDSP1-202ENST00000428361 BADQ92934 168 aa18.16■□□□□ 0.5
CTDSP1-202ENST00000428361 VTI1AQ96AJ9 217 aa18.16■□□□□ 0.5
CTDSP1-202ENST00000428361 MAF1Q9H063 256 aa18.16■□□□□ 0.5
CTDSP1-202ENST00000428361 AP5M1Q9H0R1 490 aa18.16■□□□□ 0.5
CTDSP1-202ENST00000428361 CNNM2Q9H8M5 875 aa18.16■□□□□ 0.5
CTDSP1-202ENST00000428361 VTA1Q9NP79 307 aa18.16■□□□□ 0.5
CTDSP1-202ENST00000428361 TMEM39AQ9NV64 488 aa18.16■□□□□ 0.5
CTDSP1-202ENST00000428361 A0A0U1RQG5 324 aaPredicted RBP18.15■□□□□ 0.5
CTDSP1-202ENST00000428361 KIAA0355O15063 1070 aa18.15■□□□□ 0.5
CTDSP1-202ENST00000428361 TLR3O15455 904 aaKnown RBP18.15■□□□□ 0.5
CTDSP1-202ENST00000428361 NKX3-2P78367 333 aa18.15■□□□□ 0.5
CTDSP1-202ENST00000428361 ZNF543Q08ER8 600 aa18.15■□□□□ 0.5
CTDSP1-202ENST00000428361 IQSEC1Q6DN90 963 aa18.15■□□□□ 0.5
CTDSP1-202ENST00000428361 FAM109BQ6ICB4 259 aaPredicted RBP18.15■□□□□ 0.5
CTDSP1-202ENST00000428361 CCSAPQ6IQ19 270 aaPredicted RBP18.15■□□□□ 0.5
CTDSP1-202ENST00000428361 KRT23Q9C075 422 aa18.15■□□□□ 0.5
CTDSP1-202ENST00000428361 GPCPD1Q9NPB8 672 aa18.15■□□□□ 0.5
CTDSP1-202ENST00000428361 Q9Y3F1 56 aa18.15■□□□□ 0.5
CTDSP1-202ENST00000428361 FRMPD2Q68DX3 1309 aaPredicted RBP18.15■□□□□ 0.5
CTDSP1-202ENST00000428361 WDR19Q8NEZ3 1342 aa18.15■□□□□ 0.5
CTDSP1-202ENST00000428361 MCM3APO60318 1980 aa18.15■□□□□ 0.5
CTDSP1-202ENST00000428361 SOWAHBA6NEL2 793 aa18.14■□□□□ 0.49
CTDSP1-202ENST00000428361 ASGR1P07306 291 aa18.14■□□□□ 0.49
CTDSP1-202ENST00000428361 SNHG28P0DPA3 235 aa18.14■□□□□ 0.49
CTDSP1-202ENST00000428361 SLC16A2P36021 539 aa18.14■□□□□ 0.49
CTDSP1-202ENST00000428361 MUM1L1Q5H9M0 696 aa18.14■□□□□ 0.49
CTDSP1-202ENST00000428361 TBC1D10CQ8IV04 446 aa18.14■□□□□ 0.49
CTDSP1-202ENST00000428361 KATNBL1Q9H079 304 aa18.14■□□□□ 0.49
CTDSP1-202ENST00000428361 KAT14Q9H8E8 782 aa18.14■□□□□ 0.49
CTDSP1-202ENST00000428361 PTPDC1A2A3K4 754 aa18.13■□□□□ 0.49
CTDSP1-202ENST00000428361 TRIM43BA6NCK2 446 aa18.13■□□□□ 0.49
CTDSP1-202ENST00000428361 SNAP25P60880 206 aa18.13■□□□□ 0.49
CTDSP1-202ENST00000428361 TTBK2Q6IQ55 1244 aa18.13■□□□□ 0.49
CTDSP1-202ENST00000428361 TLK2Q86UE8 772 aa18.13■□□□□ 0.49
CTDSP1-202ENST00000428361 RUFY2Q8WXA3 655 aa18.13■□□□□ 0.49
CTDSP1-202ENST00000428361 TRIM43Q96BQ3 446 aaPredicted RBP18.13■□□□□ 0.49
CTDSP1-202ENST00000428361 LAMA4Q16363 1823 aa18.13■□□□□ 0.49
CTDSP1-202ENST00000428361 RAD50Q92878 1312 aa18.13■□□□□ 0.49
CTDSP1-202ENST00000428361 ARVCFO00192 962 aa18.12■□□□□ 0.49
CTDSP1-202ENST00000428361 FPGSQ05932 587 aa18.12■□□□□ 0.49
CTDSP1-202ENST00000428361 BAATQ14032 418 aaPredicted RBP18.12■□□□□ 0.49
CTDSP1-202ENST00000428361 ASPRV1Q53RT3 343 aa18.12■□□□□ 0.49
CTDSP1-202ENST00000428361 ZNF697Q5TEC3 545 aa18.12■□□□□ 0.49
CTDSP1-202ENST00000428361 RASGRP2Q7LDG7 609 aa18.12■□□□□ 0.49
CTDSP1-202ENST00000428361 SH3RF1Q7Z6J0 888 aa18.12■□□□□ 0.49
CTDSP1-202ENST00000428361 PNMA1Q8ND90 353 aa18.12■□□□□ 0.49
CTDSP1-202ENST00000428361 MORC4Q8TE76 937 aa18.12■□□□□ 0.49
CTDSP1-202ENST00000428361 UBAC1Q9BSL1 405 aa18.12■□□□□ 0.49
CTDSP1-202ENST00000428361 STXBP5LQ9Y2K9 1186 aa18.12■□□□□ 0.49
CTDSP1-202ENST00000428361 NEDD4P46934 1319 aa18.12■□□□□ 0.49
CTDSP1-202ENST00000428361 MYADML2A6NDP7 307 aa18.11■□□□□ 0.49
CTDSP1-202ENST00000428361 KDM4AO75164 1064 aa18.11■□□□□ 0.49
CTDSP1-202ENST00000428361 ALDH5A1P51649 535 aaPredicted RBP18.11■□□□□ 0.49
CTDSP1-202ENST00000428361 SMAD3P84022 425 aaKnown RBP18.11■□□□□ 0.49
CTDSP1-202ENST00000428361 FAAP100Q0VG06 881 aa18.11■□□□□ 0.49
CTDSP1-202ENST00000428361 FSCN1Q16658 493 aaKnown RBP18.11■□□□□ 0.49
CTDSP1-202ENST00000428361 BRDTQ58F21 947 aaPredicted RBP18.11■□□□□ 0.49
CTDSP1-202ENST00000428361 RNF207Q6ZRF8 634 aa18.11■□□□□ 0.49
CTDSP1-202ENST00000428361 DNERQ8NFT8 737 aa18.11■□□□□ 0.49
CTDSP1-202ENST00000428361 ANKS1AQ92625 1134 aa18.11■□□□□ 0.49
CTDSP1-202ENST00000428361 ZSCAN10Q96SZ4 725 aaPredicted RBP18.11■□□□□ 0.49
CTDSP1-202ENST00000428361 MTMR10Q9NXD2 777 aa18.11■□□□□ 0.49
CTDSP1-202ENST00000428361 GNEQ9Y223 722 aaKnown RBP18.11■□□□□ 0.49
CTDSP1-202ENST00000428361 SUPT16HQ9Y5B9 1047 aaKnown RBP18.11■□□□□ 0.49
CTDSP1-202ENST00000428361 ADCY6O43306 1168 aa18.1■□□□□ 0.49
CTDSP1-202ENST00000428361 TIMP1P01033 207 aa18.1■□□□□ 0.49
CTDSP1-202ENST00000428361 CDK7P50613 346 aa18.1■□□□□ 0.49
CTDSP1-202ENST00000428361 TRDNQ13061 729 aa18.1■□□□□ 0.49
CTDSP1-202ENST00000428361 SHHQ15465 462 aa18.1■□□□□ 0.49
CTDSP1-202ENST00000428361 KIAA1211Q6ZU35 1233 aa18.1■□□□□ 0.49
CTDSP1-202ENST00000428361 FBXO16Q8IX29 292 aaPredicted RBP18.1■□□□□ 0.49
CTDSP1-202ENST00000428361 B4E1Z4 1266 aa18.09■□□□□ 0.49
CTDSP1-202ENST00000428361 NFIBO00712 420 aa18.09■□□□□ 0.49
CTDSP1-202ENST00000428361 NKRFO15226 690 aaKnown RBP eCLIP18.09■□□□□ 0.491e-7■■□□□ 11.7
CTDSP1-202ENST00000428361 DYNC1LI2O43237 492 aaPredicted RBP18.09■□□□□ 0.49
CTDSP1-202ENST00000428361 CALML3P27482 149 aa18.09■□□□□ 0.49
CTDSP1-202ENST00000428361 PPIGQ13427 754 aaKnown RBP eCLIP18.09■□□□□ 0.495e-8■■■□□ 16.4
CTDSP1-202ENST00000428361 EEPD1Q7L9B9 569 aa18.09■□□□□ 0.49
CTDSP1-202ENST00000428361 TMEM199Q8N511 208 aa18.09■□□□□ 0.49
CTDSP1-202ENST00000428361 RGS22Q8NE09 1264 aa18.09■□□□□ 0.49
CTDSP1-202ENST00000428361 RNPC3Q96LT9 517 aaKnown RBP18.09■□□□□ 0.49
CTDSP1-202ENST00000428361 ZKSCAN3Q9BRR0 538 aa18.09■□□□□ 0.49
CTDSP1-202ENST00000428361 TBX21Q9UL17 535 aa18.09■□□□□ 0.49
CTDSP1-202ENST00000428361 ASTN1O14525 1302 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms