RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 SAMSN1Q9NSI8 373 aaKnown RBP11.77□□□□□ -0.52
HDAC9-210ENST00000428307 PCDHA1Q9Y5I3 950 aa11.77□□□□□ -0.52
HDAC9-210ENST00000428307 ATRNL1Q5VV63 1379 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 A0A1W2PRG0 241 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 USP17L15C9J2P7 530 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 USP17L13C9JLJ4 530 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 USP17L11C9JVI0 530 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 USP17L18D6R9N7 530 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 USP17L22D6RA61 530 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 USP17L17D6RBQ6 530 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 USP17L19D6RCP7 530 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 USP17L20D6RJB6 530 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 TDP2O95551 362 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 NDUFB10O96000 172 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 CXCL9Q07325 125 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 USP17L24Q0WX57 530 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 USP17L6PQ6QN14 398 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 MIGA2Q7L4E1 593 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 FBXO41Q8TF61 875 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 TMEM39BQ9GZU3 492 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 RIC8AQ9NPQ8 531 aa11.77□□□□□ -0.53
HDAC9-210ENST00000428307 EDIL3O43854 480 aa11.76□□□□□ -0.53
HDAC9-210ENST00000428307 PRPHP41219 470 aa11.76□□□□□ -0.53
HDAC9-210ENST00000428307 MRPL12P52815 198 aaKnown RBP11.76□□□□□ -0.53
HDAC9-210ENST00000428307 NAALADL2Q58DX5 795 aa11.76□□□□□ -0.53
HDAC9-210ENST00000428307 ENOX1Q8TC92 643 aaKnown RBP11.76□□□□□ -0.53
HDAC9-210ENST00000428307 DCAF4Q8WV16 495 aa11.76□□□□□ -0.53
HDAC9-210ENST00000428307 CUL5Q93034 780 aa11.76□□□□□ -0.53
HDAC9-210ENST00000428307 PYM1Q9BRP8 204 aaKnown RBP11.76□□□□□ -0.53
HDAC9-210ENST00000428307 COL4A5P29400 1685 aa11.76□□□□□ -0.53
HDAC9-210ENST00000428307 SHTN1A0MZ66 631 aa11.76□□□□□ -0.53
HDAC9-210ENST00000428307 TMEM232C9JQI7 657 aa11.76□□□□□ -0.53
HDAC9-210ENST00000428307 SLC37A4O43826 429 aa11.76□□□□□ -0.53
HDAC9-210ENST00000428307 ECE1P42892 770 aa11.76□□□□□ -0.53
HDAC9-210ENST00000428307 CDC37Q16543 378 aaPredicted RBP11.76□□□□□ -0.53
HDAC9-210ENST00000428307 NBPF9Q3BBW0 867 aa11.76□□□□□ -0.53
HDAC9-210ENST00000428307 DALRD3Q5D0E6 543 aaKnown RBP11.76□□□□□ -0.53
HDAC9-210ENST00000428307 LRRC15Q8TF66 581 aa11.76□□□□□ -0.53
HDAC9-210ENST00000428307 FAM151AQ8WW52 585 aa11.76□□□□□ -0.53
HDAC9-210ENST00000428307 MTMR8Q96EF0 704 aa11.76□□□□□ -0.53
HDAC9-210ENST00000428307 UIMC1Q96RL1 719 aa11.76□□□□□ -0.53
HDAC9-210ENST00000428307 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.76□□□□□ -0.53
HDAC9-210ENST00000428307 MAPK8IP1Q9UQF2 711 aa11.76□□□□□ -0.53
HDAC9-210ENST00000428307 GTPBP6O43824 516 aaPredicted RBP11.75□□□□□ -0.53
HDAC9-210ENST00000428307 SKILP12757 684 aa11.75□□□□□ -0.53
HDAC9-210ENST00000428307 ERCC5P28715 1186 aaPredicted RBP11.75□□□□□ -0.53
HDAC9-210ENST00000428307 TGFB2P61812 414 aa11.75□□□□□ -0.53
HDAC9-210ENST00000428307 CALCRLQ16602 461 aa11.75□□□□□ -0.53
HDAC9-210ENST00000428307 USH1GQ495M9 461 aa11.75□□□□□ -0.53
HDAC9-210ENST00000428307 CABP7Q86V35 215 aa11.75□□□□□ -0.53
HDAC9-210ENST00000428307 JDP2Q8WYK2 163 aa11.75□□□□□ -0.53
HDAC9-210ENST00000428307 CCSER1Q9C0I3 900 aa11.75□□□□□ -0.53
HDAC9-210ENST00000428307 SPTLC3Q9NUV7 552 aa11.75□□□□□ -0.53
HDAC9-210ENST00000428307 PPP1R3GB7ZBB8 358 aa11.75□□□□□ -0.53
HDAC9-210ENST00000428307 TAL1P17542 331 aaPredicted RBP11.75□□□□□ -0.53
HDAC9-210ENST00000428307 PLCG1P19174 1290 aa11.75□□□□□ -0.53
HDAC9-210ENST00000428307 POLD1P28340 1107 aa11.75□□□□□ -0.53
HDAC9-210ENST00000428307 DHX8Q14562 1220 aaKnown RBP11.75□□□□□ -0.53
HDAC9-210ENST00000428307 SPDYE2Q495Y8 402 aa11.75□□□□□ -0.53
HDAC9-210ENST00000428307 ACER1Q8TDN7 264 aa11.75□□□□□ -0.53
HDAC9-210ENST00000428307 GJA10Q969M2 543 aa11.75□□□□□ -0.53
HDAC9-210ENST00000428307 HERC5Q9UII4 1024 aaKnown RBP11.75□□□□□ -0.53
HDAC9-210ENST00000428307 WNT10BO00744 389 aa11.74□□□□□ -0.53
HDAC9-210ENST00000428307 RPN1P04843 607 aaKnown RBP11.74□□□□□ -0.53
HDAC9-210ENST00000428307 BMP3P12645 472 aa11.74□□□□□ -0.53
HDAC9-210ENST00000428307 ZNF18P17022 549 aa11.74□□□□□ -0.53
HDAC9-210ENST00000428307 PPP1R18Q6NYC8 613 aa11.74□□□□□ -0.53
HDAC9-210ENST00000428307 GMCL1P1Q8NEA9 526 aa11.74□□□□□ -0.53
HDAC9-210ENST00000428307 AK8Q96MA6 479 aa11.74□□□□□ -0.53
HDAC9-210ENST00000428307 MTMR9Q96QG7 549 aa11.74□□□□□ -0.53
HDAC9-210ENST00000428307 TAOK3Q9H2K8 898 aa11.74□□□□□ -0.53
HDAC9-210ENST00000428307 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.74□□□□□ -0.53
HDAC9-210ENST00000428307 IMPACTQ9P2X3 320 aa11.74□□□□□ -0.53
HDAC9-210ENST00000428307 CNTNAP1P78357 1384 aa11.74□□□□□ -0.53
HDAC9-210ENST00000428307 CBFA2T2O43439 604 aa11.74□□□□□ -0.53
HDAC9-210ENST00000428307 CLK2P49760 499 aaKnown RBP11.74□□□□□ -0.53
HDAC9-210ENST00000428307 ZYXQ15942 572 aaKnown RBP11.74□□□□□ -0.53
HDAC9-210ENST00000428307 CIAPIN1Q6FI81 312 aa11.74□□□□□ -0.53
HDAC9-210ENST00000428307 ARMCX5Q6P1M9 558 aa11.74□□□□□ -0.53
HDAC9-210ENST00000428307 SAMD1Q6SPF0 538 aaPredicted RBP11.74□□□□□ -0.53
HDAC9-210ENST00000428307 AGBL3Q8NEM8 1001 aa11.74□□□□□ -0.53
HDAC9-210ENST00000428307 GMCL1Q96IK5 515 aa11.74□□□□□ -0.53
HDAC9-210ENST00000428307 BCS1LQ9Y276 419 aa11.74□□□□□ -0.53
HDAC9-210ENST00000428307 GDAQ9Y2T3 454 aa11.74□□□□□ -0.53
HDAC9-210ENST00000428307 MYO1BO43795 1136 aa11.73□□□□□ -0.53
HDAC9-210ENST00000428307 GSDMDP57764 484 aa11.73□□□□□ -0.53
HDAC9-210ENST00000428307 R3HDM1Q15032 1099 aaKnown RBP11.73□□□□□ -0.53
HDAC9-210ENST00000428307 IGSF22Q8N9C0 903 aa11.73□□□□□ -0.53
HDAC9-210ENST00000428307 MMTAG2Q9BU76 263 aaKnown RBP11.73□□□□□ -0.53
HDAC9-210ENST00000428307 INTS13Q9NVM9 706 aa11.73□□□□□ -0.53
HDAC9-210ENST00000428307 LRWD1Q9UFC0 647 aa11.73□□□□□ -0.53
HDAC9-210ENST00000428307 DDX25Q9UHL0 483 aaKnown RBP11.73□□□□□ -0.53
HDAC9-210ENST00000428307 CTNND2Q9UQB3 1225 aa11.73□□□□□ -0.53
HDAC9-210ENST00000428307 SYNRGQ9UMZ2 1314 aa11.73□□□□□ -0.53
HDAC9-210ENST00000428307 POTEMA6NI47 508 aa11.72□□□□□ -0.53
HDAC9-210ENST00000428307 MARCH6O60337 910 aa11.72□□□□□ -0.53
HDAC9-210ENST00000428307 EGFRP00533 1210 aa11.72□□□□□ -0.53
HDAC9-210ENST00000428307 SFPQP23246 707 aaKnown RBP eCLIP11.72□□□□□ -0.53
HDAC9-210ENST00000428307 CCZ1BP86790 482 aa11.72□□□□□ -0.53
HDAC9-210ENST00000428307 CCZ1P86791 482 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms