RNA–Protein interactions for RNA: ENST00000427217.5

ARPC1B-205, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-205ENST00000427217 UPF2Q9HAU5 1272 aaKnown RBP23.3■■□□□ 1.32
ARPC1B-205ENST00000427217 VAT1LQ9HCJ6 419 aa23.3■■□□□ 1.32
ARPC1B-205ENST00000427217 LRRC37A2A6NM11 1700 aa23.3■■□□□ 1.32
ARPC1B-205ENST00000427217 ABCB11O95342 1321 aa23.3■■□□□ 1.32
ARPC1B-205ENST00000427217 GOLGA8AA7E2F4 631 aa23.29■■□□□ 1.32
ARPC1B-205ENST00000427217 GOLGA8BA8MQT2 603 aa23.29■■□□□ 1.32
ARPC1B-205ENST00000427217 COBLO75128 1261 aa23.29■■□□□ 1.32
ARPC1B-205ENST00000427217 HMGCRP04035 888 aa23.29■■□□□ 1.32
ARPC1B-205ENST00000427217 ELNP15502 786 aa23.29■■□□□ 1.32
ARPC1B-205ENST00000427217 TRAF1Q13077 416 aa23.29■■□□□ 1.32
ARPC1B-205ENST00000427217 MUM1L1Q5H9M0 696 aa23.29■■□□□ 1.32
ARPC1B-205ENST00000427217 FBXO11Q86XK2 927 aa23.29■■□□□ 1.32
ARPC1B-205ENST00000427217 RAB11FIP4Q86YS3 637 aa23.29■■□□□ 1.32
ARPC1B-205ENST00000427217 CCDC144CPQ8IYA2 1237 aa23.29■■□□□ 1.32
ARPC1B-205ENST00000427217 SRBD1Q8N5C6 995 aaKnown RBP23.29■■□□□ 1.32
ARPC1B-205ENST00000427217 NPLOC4Q8TAT6 608 aa23.29■■□□□ 1.32
ARPC1B-205ENST00000427217 TRIB2Q92519 343 aa23.29■■□□□ 1.32
ARPC1B-205ENST00000427217 ZNF333Q96JL9 665 aa23.29■■□□□ 1.32
ARPC1B-205ENST00000427217 AMNQ9BXJ7 453 aa23.29■■□□□ 1.32
ARPC1B-205ENST00000427217 C22orf23Q9BZE7 217 aa23.29■■□□□ 1.32
ARPC1B-205ENST00000427217 A1CFQ9NQ94 594 aaKnown RBP23.29■■□□□ 1.32
ARPC1B-205ENST00000427217 CCDC196A0A1B0GTZ2 297 aa23.28■■□□□ 1.32
ARPC1B-205ENST00000427217 PLEKHA8P1O95397 391 aa23.28■■□□□ 1.32
ARPC1B-205ENST00000427217 IGHA2P01877 340 aa23.28■■□□□ 1.32
ARPC1B-205ENST00000427217 METAP2P50579 478 aaKnown RBP eCLIP23.28■■□□□ 1.323e-6■□□□□ 11.2
ARPC1B-205ENST00000427217 OLFML2BQ68BL8 750 aa23.28■■□□□ 1.32
ARPC1B-205ENST00000427217 ANKRD35Q8N283 1001 aa23.28■■□□□ 1.32
ARPC1B-205ENST00000427217 SH3TC2Q8TF17 1288 aa23.28■■□□□ 1.32
ARPC1B-205ENST00000427217 DDX11Q96FC9 970 aa23.28■■□□□ 1.32
ARPC1B-205ENST00000427217 PNMA6FA0A0J9YX94 578 aa23.27■■□□□ 1.32
ARPC1B-205ENST00000427217 UBXN2AP68543 259 aa23.27■■□□□ 1.32
ARPC1B-205ENST00000427217 ZNF792Q3KQV3 632 aa23.27■■□□□ 1.32
ARPC1B-205ENST00000427217 CLEC4DQ8WXI8 215 aa23.27■■□□□ 1.32
ARPC1B-205ENST00000427217 RRP36Q96EU6 259 aaKnown RBP23.27■■□□□ 1.32
ARPC1B-205ENST00000427217 ZNF274Q96GC6 653 aaPredicted RBP23.27■■□□□ 1.32
ARPC1B-205ENST00000427217 PIGSQ96S52 555 aa23.27■■□□□ 1.32
ARPC1B-205ENST00000427217 FAM217BQ9NTX9 383 aaPredicted RBP23.27■■□□□ 1.32
ARPC1B-205ENST00000427217 PPP1R11O60927 126 aaPredicted RBP23.26■■□□□ 1.31
ARPC1B-205ENST00000427217 INHAP05111 366 aa23.26■■□□□ 1.31
ARPC1B-205ENST00000427217 TAL1P17542 331 aaPredicted RBP23.26■■□□□ 1.31
ARPC1B-205ENST00000427217 ANKRD1Q15327 319 aa23.26■■□□□ 1.31
ARPC1B-205ENST00000427217 CCL14Q16627 93 aa23.26■■□□□ 1.31
ARPC1B-205ENST00000427217 USH1GQ495M9 461 aa23.26■■□□□ 1.31
ARPC1B-205ENST00000427217 ZNF467Q7Z7K2 595 aaPredicted RBP23.26■■□□□ 1.31
ARPC1B-205ENST00000427217 HOMER1Q86YM7 354 aa23.26■■□□□ 1.31
ARPC1B-205ENST00000427217 RGS22Q8NE09 1264 aa23.26■■□□□ 1.31
ARPC1B-205ENST00000427217 MAML3Q96JK9 1138 aa23.26■■□□□ 1.31
ARPC1B-205ENST00000427217 CYP39A1Q9NYL5 469 aa23.26■■□□□ 1.31
ARPC1B-205ENST00000427217 CNTNAP5Q8WYK1 1306 aa23.26■■□□□ 1.31
ARPC1B-205ENST00000427217 NFIBO00712 420 aa23.25■■□□□ 1.31
ARPC1B-205ENST00000427217 PGK2P07205 417 aa23.25■■□□□ 1.31
ARPC1B-205ENST00000427217 PDIA3P30101 505 aaKnown RBP23.25■■□□□ 1.31
ARPC1B-205ENST00000427217 CDC27P30260 824 aa23.25■■□□□ 1.31
ARPC1B-205ENST00000427217 MSL3Q8N5Y2 521 aaKnown RBP23.25■■□□□ 1.31
ARPC1B-205ENST00000427217 BACH2Q9BYV9 841 aa23.25■■□□□ 1.31
ARPC1B-205ENST00000427217 FLRT1Q9NZU1 646 aa23.25■■□□□ 1.31
ARPC1B-205ENST00000427217 SEC63Q9UGP8 760 aaKnown RBP23.25■■□□□ 1.31
ARPC1B-205ENST00000427217 NAP1L2Q9ULW6 460 aaPredicted RBP23.25■■□□□ 1.31
ARPC1B-205ENST00000427217 MRPL11Q9Y3B7 192 aaKnown RBP23.25■■□□□ 1.31
ARPC1B-205ENST00000427217 FUT2Q10981 343 aa23.24■■□□□ 1.31
ARPC1B-205ENST00000427217 MAP3K21Q5TCX8 1036 aa23.24■■□□□ 1.31
ARPC1B-205ENST00000427217 FAM133AQ8N9E0 248 aa23.24■■□□□ 1.31
ARPC1B-205ENST00000427217 KIF2CQ99661 725 aa23.24■■□□□ 1.31
ARPC1B-205ENST00000427217 BIN2Q9UBW5 565 aaPredicted RBP23.24■■□□□ 1.31
ARPC1B-205ENST00000427217 CCDC85CA6NKD9 419 aa23.23■■□□□ 1.31
ARPC1B-205ENST00000427217 GHRHRQ02643 423 aa23.23■■□□□ 1.31
ARPC1B-205ENST00000427217 MFSD14CQ5VZR4 134 aa23.23■■□□□ 1.31
ARPC1B-205ENST00000427217 NSMFQ6X4W1 530 aa23.23■■□□□ 1.31
ARPC1B-205ENST00000427217 CMTR1Q8N1G2 835 aaKnown RBP23.23■■□□□ 1.31
ARPC1B-205ENST00000427217 SAMD3Q8N6K7 520 aa23.23■■□□□ 1.31
ARPC1B-205ENST00000427217 IL27Q8NEV9 243 aa23.23■■□□□ 1.31
ARPC1B-205ENST00000427217 PCDHA1Q9Y5I3 950 aa23.23■■□□□ 1.31
ARPC1B-205ENST00000427217 KIAA1217Q5T5P2 1943 aa23.23■■□□□ 1.31
ARPC1B-205ENST00000427217 POTEB2H3BUK9 544 aa23.22■■□□□ 1.31
ARPC1B-205ENST00000427217 NEK4P51957 841 aa23.22■■□□□ 1.31
ARPC1B-205ENST00000427217 AK2P54819 239 aa23.22■■□□□ 1.31
ARPC1B-205ENST00000427217 MAMDC4Q6UXC1 1216 aa23.22■■□□□ 1.31
ARPC1B-205ENST00000427217 RNF207Q6ZRF8 634 aa23.22■■□□□ 1.31
ARPC1B-205ENST00000427217 MCF2L2Q86YR7 1114 aa23.22■■□□□ 1.31
ARPC1B-205ENST00000427217 FGD4Q96M96 766 aa23.22■■□□□ 1.31
ARPC1B-205ENST00000427217 LOC102724159A0A0B4J2E5 919 aa23.21■■□□□ 1.31
ARPC1B-205ENST00000427217 ADD1P35611 737 aaKnown RBP23.21■■□□□ 1.31
ARPC1B-205ENST00000427217 PWP2Q15269 919 aaKnown RBP23.21■■□□□ 1.31
ARPC1B-205ENST00000427217 TBC1D32Q96NH3 1257 aa23.21■■□□□ 1.31
ARPC1B-205ENST00000427217 MAP3K20Q9NYL2 800 aaKnown RBP23.21■■□□□ 1.31
ARPC1B-205ENST00000427217 RBM27Q9P2N5 1060 aaKnown RBP23.21■■□□□ 1.31
ARPC1B-205ENST00000427217 SYNGAP1Q96PV0 1343 aa23.21■■□□□ 1.31
ARPC1B-205ENST00000427217 KIAA0100Q14667 2235 aaKnown RBP23.21■■□□□ 1.31
ARPC1B-205ENST00000427217 RPTORQ8N122 1335 aa23.2■■□□□ 1.3
ARPC1B-205ENST00000427217 OPLAHO14841 1288 aa23.2■■□□□ 1.3
ARPC1B-205ENST00000427217 PRKAR2AP13861 404 aaKnown RBP23.2■■□□□ 1.3
ARPC1B-205ENST00000427217 RPS6P62753 249 aaKnown RBP23.2■■□□□ 1.3
ARPC1B-205ENST00000427217 CACNB2Q08289 660 aaPredicted RBP23.2■■□□□ 1.3
ARPC1B-205ENST00000427217 TRIM32Q13049 653 aa23.2■■□□□ 1.3
ARPC1B-205ENST00000427217 BAATQ14032 418 aaPredicted RBP23.2■■□□□ 1.3
ARPC1B-205ENST00000427217 SLC30A10Q6XR72 485 aa23.2■■□□□ 1.3
ARPC1B-205ENST00000427217 CCDC82Q8N4S0 544 aa23.2■■□□□ 1.3
ARPC1B-205ENST00000427217 TINF2Q9BSI4 451 aa23.2■■□□□ 1.3
ARPC1B-205ENST00000427217 NRBP1Q9UHY1 535 aa23.2■■□□□ 1.3
ARPC1B-205ENST00000427217 PTPDC1A2A3K4 754 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms