RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 SOWAHBA6NEL2 793 aa17.46■□□□□ 0.39
PDAP1-202ENST00000426447 B4GALT4O60513 344 aa17.46■□□□□ 0.39
PDAP1-202ENST00000426447 BMP1P13497 986 aa17.46■□□□□ 0.39
PDAP1-202ENST00000426447 ATP2A2P16615 1042 aaKnown RBP17.46■□□□□ 0.39
PDAP1-202ENST00000426447 SMPD1P17405 629 aa17.46■□□□□ 0.39
PDAP1-202ENST00000426447 PSMC6P62333 389 aa17.46■□□□□ 0.39
PDAP1-202ENST00000426447 IQSEC1Q6DN90 963 aa17.46■□□□□ 0.39
PDAP1-202ENST00000426447 EEPD1Q7L9B9 569 aa17.46■□□□□ 0.39
PDAP1-202ENST00000426447 GMCL1P1Q8NEA9 526 aa17.46■□□□□ 0.39
PDAP1-202ENST00000426447 CHURC1Q8WUH1 139 aa17.46■□□□□ 0.39
PDAP1-202ENST00000426447 CHMP4CQ96CF2 233 aa17.46■□□□□ 0.39
PDAP1-202ENST00000426447 SCLYQ96I15 445 aa17.46■□□□□ 0.39
PDAP1-202ENST00000426447 AGBL1Q96MI9 1066 aa17.46■□□□□ 0.39
PDAP1-202ENST00000426447 TRERF1Q96PN7 1200 aa17.46■□□□□ 0.39
PDAP1-202ENST00000426447 A1CFQ9NQ94 594 aaKnown RBP17.46■□□□□ 0.39
PDAP1-202ENST00000426447 RNF146Q9NTX7 359 aa17.46■□□□□ 0.39
PDAP1-202ENST00000426447 DDX19BQ9UMR2 479 aa17.46■□□□□ 0.39
PDAP1-202ENST00000426447 SYNPO2Q9UMS6 1093 aa17.46■□□□□ 0.39
PDAP1-202ENST00000426447 GTPBP6O43824 516 aaPredicted RBP17.45■□□□□ 0.38
PDAP1-202ENST00000426447 TSPY3P0CV98 308 aa17.45■□□□□ 0.38
PDAP1-202ENST00000426447 TSPY8P0CW00 308 aa17.45■□□□□ 0.38
PDAP1-202ENST00000426447 ALAS1P13196 640 aa17.45■□□□□ 0.38
PDAP1-202ENST00000426447 STAT2P52630 851 aa17.45■□□□□ 0.38
PDAP1-202ENST00000426447 TFF2Q03403 129 aa17.45■□□□□ 0.38
PDAP1-202ENST00000426447 FAM160B2Q86V87 743 aa17.45■□□□□ 0.38
PDAP1-202ENST00000426447 LRRCC1Q9C099 1032 aa17.45■□□□□ 0.38
PDAP1-202ENST00000426447 WNT8AQ9H1J5 351 aa17.45■□□□□ 0.38
PDAP1-202ENST00000426447 GRIN2DO15399 1336 aa17.45■□□□□ 0.38
PDAP1-202ENST00000426447 MUC3AQ02505 3323 aa17.44■□□□□ 0.38
PDAP1-202ENST00000426447 GNAT2P19087 354 aa17.44■□□□□ 0.38
PDAP1-202ENST00000426447 SLC1A4P43007 532 aa17.44■□□□□ 0.38
PDAP1-202ENST00000426447 TKFCQ3LXA3 575 aa17.44■□□□□ 0.38
PDAP1-202ENST00000426447 TMEM67Q5HYA8 995 aa17.44■□□□□ 0.38
PDAP1-202ENST00000426447 KIAA1211Q6ZU35 1233 aa17.44■□□□□ 0.38
PDAP1-202ENST00000426447 STAG1Q8WVM7 1258 aa17.44■□□□□ 0.38
PDAP1-202ENST00000426447 OSBP2Q969R2 916 aa17.44■□□□□ 0.38
PDAP1-202ENST00000426447 CHMP4BQ9H444 224 aaKnown RBP17.44■□□□□ 0.38
PDAP1-202ENST00000426447 PDGFCQ9NRA1 345 aa17.44■□□□□ 0.38
PDAP1-202ENST00000426447 ZBTB40Q9NUA8 1239 aa17.44■□□□□ 0.38
PDAP1-202ENST00000426447 Q9Y3F1 56 aa17.44■□□□□ 0.38
PDAP1-202ENST00000426447 SUPT20HL2P0C7V6 817 aa17.43■□□□□ 0.38
PDAP1-202ENST00000426447 PTGS1P23219 599 aa17.43■□□□□ 0.38
PDAP1-202ENST00000426447 KCNQ1P51787 676 aa17.43■□□□□ 0.38
PDAP1-202ENST00000426447 DEFB128Q7Z7B8 93 aa17.43■□□□□ 0.38
PDAP1-202ENST00000426447 FBXO16Q8IX29 292 aaPredicted RBP17.43■□□□□ 0.38
PDAP1-202ENST00000426447 APPBP2Q92624 585 aa17.43■□□□□ 0.38
PDAP1-202ENST00000426447 DDX49Q9Y6V7 483 aaKnown RBP17.43■□□□□ 0.38
PDAP1-202ENST00000426447 RFXAPO00287 272 aa17.42■□□□□ 0.38
PDAP1-202ENST00000426447 RNF113AO15541 343 aaKnown RBP17.42■□□□□ 0.38
PDAP1-202ENST00000426447 GPAA1O43292 621 aa17.42■□□□□ 0.38
PDAP1-202ENST00000426447 SMARCA5O60264 1052 aaPredicted RBP17.42■□□□□ 0.38
PDAP1-202ENST00000426447 SLC3A2P08195 630 aaKnown RBP17.42■□□□□ 0.38
PDAP1-202ENST00000426447 PFKMP08237 780 aa17.42■□□□□ 0.38
PDAP1-202ENST00000426447 ACTN1P12814 892 aa17.42■□□□□ 0.38
PDAP1-202ENST00000426447 MCCP23508 829 aa17.42■□□□□ 0.38
PDAP1-202ENST00000426447 TFAP4Q01664 338 aa17.42■□□□□ 0.38
PDAP1-202ENST00000426447 PDE4BQ07343 736 aa17.42■□□□□ 0.38
PDAP1-202ENST00000426447 TAPT1Q6NXT6 567 aa17.42■□□□□ 0.38
PDAP1-202ENST00000426447 KBTBD3Q8NAB2 608 aa17.42■□□□□ 0.38
PDAP1-202ENST00000426447 NEDD1Q8NHV4 660 aa17.42■□□□□ 0.38
PDAP1-202ENST00000426447 NACAP1Q9BZK3 213 aa17.42■□□□□ 0.38
PDAP1-202ENST00000426447 ALDH8A1Q9H2A2 487 aaPredicted RBP17.42■□□□□ 0.38
PDAP1-202ENST00000426447 CERS4Q9HA82 394 aa17.42■□□□□ 0.38
PDAP1-202ENST00000426447 GPHNQ9NQX3 736 aaPredicted RBP17.42■□□□□ 0.38
PDAP1-202ENST00000426447 ECHDC1Q9NTX5 307 aa17.42■□□□□ 0.38
PDAP1-202ENST00000426447 PATL2C9JE40 543 aaKnown RBP17.41■□□□□ 0.38
PDAP1-202ENST00000426447 ERC2O15083 957 aa17.41■□□□□ 0.38
PDAP1-202ENST00000426447 CA3P07451 260 aa17.41■□□□□ 0.38
PDAP1-202ENST00000426447 CYP2C9P11712 490 aa17.41■□□□□ 0.38
PDAP1-202ENST00000426447 SNAP25P60880 206 aa17.41■□□□□ 0.38
PDAP1-202ENST00000426447 TTLL4Q14679 1199 aa17.41■□□□□ 0.38
PDAP1-202ENST00000426447 NSMFQ6X4W1 530 aa17.41■□□□□ 0.38
PDAP1-202ENST00000426447 IFNL3Q8IZI9 196 aa17.41■□□□□ 0.38
PDAP1-202ENST00000426447 EPB41L4AQ9HCS5 686 aaPredicted RBP17.41■□□□□ 0.38
PDAP1-202ENST00000426447 VTA1Q9NP79 307 aa17.41■□□□□ 0.38
PDAP1-202ENST00000426447 TRMT13Q9NUP7 481 aaKnown RBP17.41■□□□□ 0.38
PDAP1-202ENST00000426447 POLR3EQ9NVU0 708 aa17.41■□□□□ 0.38
PDAP1-202ENST00000426447 ZNF536O15090 1300 aa17.41■□□□□ 0.38
PDAP1-202ENST00000426447 ZFYP08048 801 aaPredicted RBP17.4■□□□□ 0.38
PDAP1-202ENST00000426447 MYL3P08590 195 aa17.4■□□□□ 0.38
PDAP1-202ENST00000426447 TMEM63BQ5T3F8 832 aa17.4■□□□□ 0.38
PDAP1-202ENST00000426447 KCTD1Q719H9 257 aa17.4■□□□□ 0.38
PDAP1-202ENST00000426447 GPATCH3Q96I76 525 aa17.4■□□□□ 0.38
PDAP1-202ENST00000426447 GMCL1Q96IK5 515 aa17.4■□□□□ 0.38
PDAP1-202ENST00000426447 CYP39A1Q9NYL5 469 aa17.4■□□□□ 0.38
PDAP1-202ENST00000426447 MTCH2Q9Y6C9 303 aa17.4■□□□□ 0.38
PDAP1-202ENST00000426447 KIF28PB7ZC32 967 aa17.39■□□□□ 0.37
PDAP1-202ENST00000426447 LRRFIP1Q32MZ4 808 aaKnown RBP17.39■□□□□ 0.37
PDAP1-202ENST00000426447 MUM1L1Q5H9M0 696 aa17.39■□□□□ 0.37
PDAP1-202ENST00000426447 FAM47CQ5HY64 1035 aa17.39■□□□□ 0.37
PDAP1-202ENST00000426447 PPP4R3BQ5MIZ7 849 aa17.39■□□□□ 0.37
PDAP1-202ENST00000426447 RCSD1Q6JBY9 416 aa17.39■□□□□ 0.37
PDAP1-202ENST00000426447 RETREG2Q8NC44 543 aa17.39■□□□□ 0.37
PDAP1-202ENST00000426447 ARNTL2Q8WYA1 636 aa17.39■□□□□ 0.37
PDAP1-202ENST00000426447 WDR11Q9BZH6 1224 aa17.39■□□□□ 0.37
PDAP1-202ENST00000426447 FTOQ9C0B1 505 aaKnown RBP eCLIP17.39■□□□□ 0.373e-12■■■■■ 66
PDAP1-202ENST00000426447 CCPG1Q9ULG6 757 aa17.39■□□□□ 0.37
PDAP1-202ENST00000426447 STX8Q9UNK0 236 aa17.39■□□□□ 0.37
PDAP1-202ENST00000426447 COG5Q9UP83 839 aa17.39■□□□□ 0.37
PDAP1-202ENST00000426447 TNKSO95271 1327 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms