RNA–Protein interactions for RNA: ENST00000426385.3

PMP22-204, Transcript of peripheral myelin protein 22, humanhuman

TSL 2 BASIC

Gene PMP22, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-204ENST00000426385 CCDC136Q96JN2 1154 aa11.07□□□□□ -0.64
PMP22-204ENST00000426385 UBA5Q9GZZ9 404 aa11.07□□□□□ -0.64
PMP22-204ENST00000426385 CTNNA3Q9UI47 895 aa11.07□□□□□ -0.64
PMP22-204ENST00000426385 CCPG1Q9ULG6 757 aa11.07□□□□□ -0.64
PMP22-204ENST00000426385 CTDP1Q9Y5B0 961 aaPredicted RBP11.07□□□□□ -0.64
PMP22-204ENST00000426385 MYO9BQ13459 2157 aa11.07□□□□□ -0.64
PMP22-204ENST00000426385 SOWAHBA6NEL2 793 aa11.06□□□□□ -0.64
PMP22-204ENST00000426385 NFIBO00712 420 aa11.06□□□□□ -0.64
PMP22-204ENST00000426385 PLA2G6O60733 806 aa11.06□□□□□ -0.64
PMP22-204ENST00000426385 SNAI1O95863 264 aaPredicted RBP11.06□□□□□ -0.64
PMP22-204ENST00000426385 ZNF865P0CJ78 1059 aaPredicted RBP11.06□□□□□ -0.64
PMP22-204ENST00000426385 OAZ1P54368 228 aa11.06□□□□□ -0.64
PMP22-204ENST00000426385 BMP2KLQ5H9B9 411 aa11.06□□□□□ -0.64
PMP22-204ENST00000426385 PPP4R3BQ5MIZ7 849 aa11.06□□□□□ -0.64
PMP22-204ENST00000426385 BTNL9Q6UXG8 535 aa11.06□□□□□ -0.64
PMP22-204ENST00000426385 SLC30A10Q6XR72 485 aa11.06□□□□□ -0.64
PMP22-204ENST00000426385 SH3RF1Q7Z6J0 888 aa11.06□□□□□ -0.64
PMP22-204ENST00000426385 ANKRD35Q8N283 1001 aa11.06□□□□□ -0.64
PMP22-204ENST00000426385 STAG2Q8N3U4 1231 aa11.06□□□□□ -0.64
PMP22-204ENST00000426385 CHURC1Q8WUH1 139 aa11.06□□□□□ -0.64
PMP22-204ENST00000426385 RUFY2Q8WXA3 655 aa11.06□□□□□ -0.64
PMP22-204ENST00000426385 MAP4K1Q92918 833 aa11.06□□□□□ -0.64
PMP22-204ENST00000426385 TRERF1Q96PN7 1200 aa11.06□□□□□ -0.64
PMP22-204ENST00000426385 TINF2Q9BSI4 451 aa11.06□□□□□ -0.64
PMP22-204ENST00000426385 ACAD9Q9H845 621 aa11.06□□□□□ -0.64
PMP22-204ENST00000426385 U3KPZ7 1027 aaPredicted RBP11.06□□□□□ -0.64
PMP22-204ENST00000426385 MYH6P13533 1939 aa11.05□□□□□ -0.64
PMP22-204ENST00000426385 CDH23Q9H251 3354 aa11.05□□□□□ -0.64
PMP22-204ENST00000426385 ICAM1P05362 532 aa11.05□□□□□ -0.64
PMP22-204ENST00000426385 COPB2P35606 906 aa11.05□□□□□ -0.64
PMP22-204ENST00000426385 TMEM63BQ5T3F8 832 aa11.05□□□□□ -0.64
PMP22-204ENST00000426385 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.05□□□□□ -0.64
PMP22-204ENST00000426385 IQCA1Q86XH1 822 aa11.05□□□□□ -0.64
PMP22-204ENST00000426385 DGKHQ86XP1 1220 aa11.05□□□□□ -0.64
PMP22-204ENST00000426385 MB21D2Q8IYB1 491 aaPredicted RBP11.05□□□□□ -0.64
PMP22-204ENST00000426385 FAM133AQ8N9E0 248 aa11.05□□□□□ -0.64
PMP22-204ENST00000426385 USP38Q8NB14 1042 aa11.05□□□□□ -0.64
PMP22-204ENST00000426385 CHST13Q8NET6 341 aa11.05□□□□□ -0.64
PMP22-204ENST00000426385 CLEC4DQ8WXI8 215 aa11.05□□□□□ -0.64
PMP22-204ENST00000426385 ANKS1AQ92625 1134 aa11.05□□□□□ -0.64
PMP22-204ENST00000426385 DDX11Q96FC9 970 aa11.05□□□□□ -0.64
PMP22-204ENST00000426385 TTC14Q96N46 770 aa11.05□□□□□ -0.64
PMP22-204ENST00000426385 KRT23Q9C075 422 aa11.05□□□□□ -0.64
PMP22-204ENST00000426385 KATNBL1Q9H079 304 aa11.05□□□□□ -0.64
PMP22-204ENST00000426385 KAT14Q9H8E8 782 aa11.05□□□□□ -0.64
PMP22-204ENST00000426385 ZHX1Q9UKY1 873 aaPredicted RBP11.05□□□□□ -0.64
PMP22-204ENST00000426385 LTBP2Q14767 1821 aa11.05□□□□□ -0.64
PMP22-204ENST00000426385 MYADML2A6NDP7 307 aa11.04□□□□□ -0.64
PMP22-204ENST00000426385 SLC27A2O14975 620 aa11.04□□□□□ -0.64
PMP22-204ENST00000426385 SEPT4O43236 478 aa11.04□□□□□ -0.64
PMP22-204ENST00000426385 PGK1P00558 417 aa11.04□□□□□ -0.64
PMP22-204ENST00000426385 GRIN2CQ14957 1233 aa11.04□□□□□ -0.64
PMP22-204ENST00000426385 USH1GQ495M9 461 aa11.04□□□□□ -0.64
PMP22-204ENST00000426385 TRIM60Q495X7 471 aa11.04□□□□□ -0.64
PMP22-204ENST00000426385 IFIT1BQ5T764 474 aaKnown RBP11.04□□□□□ -0.64
PMP22-204ENST00000426385 NSMFQ6X4W1 530 aa11.04□□□□□ -0.64
PMP22-204ENST00000426385 SLC39A5Q6ZMH5 540 aa11.04□□□□□ -0.64
PMP22-204ENST00000426385 SYMPKQ92797 1274 aaKnown RBP11.04□□□□□ -0.64
PMP22-204ENST00000426385 UBAC1Q9BSL1 405 aa11.04□□□□□ -0.64
PMP22-204ENST00000426385 MYL10Q9BUA6 226 aa11.04□□□□□ -0.64
PMP22-204ENST00000426385 CNNM2Q9H8M5 875 aa11.04□□□□□ -0.64
PMP22-204ENST00000426385 ANO2Q9NQ90 1003 aa11.04□□□□□ -0.64
PMP22-204ENST00000426385 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.04□□□□□ -0.64
PMP22-204ENST00000426385 CYP39A1Q9NYL5 469 aa11.04□□□□□ -0.64
PMP22-204ENST00000426385 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.03□□□□□ -0.64
PMP22-204ENST00000426385 TRIM43BA6NCK2 446 aa11.03□□□□□ -0.64
PMP22-204ENST00000426385 TNFRSF10AO00220 468 aa11.03□□□□□ -0.64
PMP22-204ENST00000426385 PPP1R11O60927 126 aaPredicted RBP11.03□□□□□ -0.64
PMP22-204ENST00000426385 ADCYAP1R1P41586 468 aa11.03□□□□□ -0.64
PMP22-204ENST00000426385 CDC37Q16543 378 aaPredicted RBP11.03□□□□□ -0.64
PMP22-204ENST00000426385 CREB3L3Q68CJ9 461 aa11.03□□□□□ -0.64
PMP22-204ENST00000426385 ARMCX2Q7L311 632 aa11.03□□□□□ -0.64
PMP22-204ENST00000426385 RAB11FIP4Q86YS3 637 aa11.03□□□□□ -0.64
PMP22-204ENST00000426385 CCDC144CPQ8IYA2 1237 aa11.03□□□□□ -0.64
PMP22-204ENST00000426385 ADGRF4Q8IZF3 695 aa11.03□□□□□ -0.64
PMP22-204ENST00000426385 TRIM43Q96BQ3 446 aaPredicted RBP11.03□□□□□ -0.64
PMP22-204ENST00000426385 SLC5A4Q9NY91 659 aa11.03□□□□□ -0.64
PMP22-204ENST00000426385 FBXO40Q9UH90 709 aa11.03□□□□□ -0.64
PMP22-204ENST00000426385 DIS3Q9Y2L1 958 aaKnown RBP11.03□□□□□ -0.64
PMP22-204ENST00000426385 SYNRGQ9UMZ2 1314 aa11.03□□□□□ -0.64
PMP22-204ENST00000426385 DNM1LO00429 736 aa11.02□□□□□ -0.65
PMP22-204ENST00000426385 IFIT3O14879 490 aaKnown RBP11.02□□□□□ -0.65
PMP22-204ENST00000426385 CDC45O75419 566 aa11.02□□□□□ -0.65
PMP22-204ENST00000426385 FDX1P10109 184 aa11.02□□□□□ -0.65
PMP22-204ENST00000426385 EPHB4P54760 987 aa11.02□□□□□ -0.65
PMP22-204ENST00000426385 SMAD3P84022 425 aaKnown RBP11.02□□□□□ -0.65
PMP22-204ENST00000426385 BAATQ14032 418 aaPredicted RBP11.02□□□□□ -0.65
PMP22-204ENST00000426385 NECTIN1Q15223 517 aa11.02□□□□□ -0.65
PMP22-204ENST00000426385 LRRC41Q15345 812 aa11.02□□□□□ -0.65
PMP22-204ENST00000426385 QRICH1Q2TAL8 776 aa11.02□□□□□ -0.65
PMP22-204ENST00000426385 MAMDC4Q6UXC1 1216 aa11.02□□□□□ -0.65
PMP22-204ENST00000426385 EEPD1Q7L9B9 569 aa11.02□□□□□ -0.65
PMP22-204ENST00000426385 RALYLQ86SE5 291 aaKnown RBP11.02□□□□□ -0.65
PMP22-204ENST00000426385 FBXO16Q8IX29 292 aaPredicted RBP11.02□□□□□ -0.65
PMP22-204ENST00000426385 ARRDC4Q8NCT1 418 aa11.02□□□□□ -0.65
PMP22-204ENST00000426385 NCOA7Q8NI08 942 aa11.02□□□□□ -0.65
PMP22-204ENST00000426385 TBC1D5Q92609 795 aa11.02□□□□□ -0.65
PMP22-204ENST00000426385 RNPC3Q96LT9 517 aaKnown RBP11.02□□□□□ -0.65
PMP22-204ENST00000426385 TCEANC2Q96MN5 208 aa11.02□□□□□ -0.65
PMP22-204ENST00000426385 LRRC2Q9BYS8 371 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms