RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 IGFL4Q6B9Z1 124 aa4.59□□□□□ -1.67
R3HDM1-205ENST00000425804 CIR1Q86X95 450 aaPredicted RBP4.59□□□□□ -1.67
R3HDM1-205ENST00000425804 ANTXR1Q9H6X2 564 aa4.59□□□□□ -1.67
R3HDM1-205ENST00000425804 CHST7Q9NS84 486 aa4.59□□□□□ -1.67
R3HDM1-205ENST00000425804 TCAF1Q9Y4C2 921 aa4.59□□□□□ -1.67
R3HDM1-205ENST00000425804 DNAJA2O60884 412 aa4.58□□□□□ -1.68
R3HDM1-205ENST00000425804 PPFIA2O75334 1257 aa4.58□□□□□ -1.68
R3HDM1-205ENST00000425804 RPL13P26373 211 aaKnown RBP4.58□□□□□ -1.68
R3HDM1-205ENST00000425804 BMP8BP34820 402 aa4.58□□□□□ -1.68
R3HDM1-205ENST00000425804 SURF1Q15526 300 aa4.58□□□□□ -1.68
R3HDM1-205ENST00000425804 NBPF12Q5TAG4 269 aaPredicted RBP4.58□□□□□ -1.68
R3HDM1-205ENST00000425804 C9orf131Q5VYM1 1079 aa4.58□□□□□ -1.68
R3HDM1-205ENST00000425804 MCTP2Q6DN12 878 aa4.58□□□□□ -1.68
R3HDM1-205ENST00000425804 LINC00482Q8N8I6 264 aa4.58□□□□□ -1.68
R3HDM1-205ENST00000425804 IGDCC4Q8TDY8 1250 aa4.58□□□□□ -1.68
R3HDM1-205ENST00000425804 PDLIM7Q9NR12 457 aa4.58□□□□□ -1.68
R3HDM1-205ENST00000425804 SPG7Q9UQ90 795 aa4.58□□□□□ -1.68
R3HDM1-205ENST00000425804 TESMINQ9Y4I5 508 aa4.58□□□□□ -1.68
R3HDM1-205ENST00000425804 B4GALT3O60512 393 aa4.57□□□□□ -1.68
R3HDM1-205ENST00000425804 PPP1R15AO75807 674 aaPredicted RBP4.57□□□□□ -1.68
R3HDM1-205ENST00000425804 UBOX5O94941 541 aa4.57□□□□□ -1.68
R3HDM1-205ENST00000425804 ACRP10323 421 aa4.57□□□□□ -1.68
R3HDM1-205ENST00000425804 VAV1P15498 845 aa4.57□□□□□ -1.68
R3HDM1-205ENST00000425804 TACR1P25103 407 aa4.57□□□□□ -1.68
R3HDM1-205ENST00000425804 CTSKP43235 329 aa4.57□□□□□ -1.68
R3HDM1-205ENST00000425804 CSRP2Q16527 193 aa4.57□□□□□ -1.68
R3HDM1-205ENST00000425804 B4GALNT3Q6L9W6 998 aa4.57□□□□□ -1.68
R3HDM1-205ENST00000425804 JAMLQ86YT9 394 aa4.57□□□□□ -1.68
R3HDM1-205ENST00000425804 CPA5Q8WXQ8 436 aa4.57□□□□□ -1.68
R3HDM1-205ENST00000425804 VOPP1Q96AW1 172 aa4.57□□□□□ -1.68
R3HDM1-205ENST00000425804 DDX11Q96FC9 970 aa4.57□□□□□ -1.68
R3HDM1-205ENST00000425804 SEMA4AQ9H3S1 761 aa4.57□□□□□ -1.68
R3HDM1-205ENST00000425804 PRR36Q9H6K5 1346 aa4.56□□□□□ -1.68
R3HDM1-205ENST00000425804 RGS13O14921 159 aa4.56□□□□□ -1.68
R3HDM1-205ENST00000425804 THBS2P35442 1172 aa4.56□□□□□ -1.68
R3HDM1-205ENST00000425804 CACNB2Q08289 660 aaPredicted RBP4.56□□□□□ -1.68
R3HDM1-205ENST00000425804 FOXE3Q13461 319 aa4.56□□□□□ -1.68
R3HDM1-205ENST00000425804 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
R3HDM1-205ENST00000425804 HLA-DQA1Q5Y7H0 255 aa4.56□□□□□ -1.68
R3HDM1-205ENST00000425804 AEBP1Q8IUX7 1158 aa4.56□□□□□ -1.68
R3HDM1-205ENST00000425804 SCUBE1Q8IWY4 988 aa4.56□□□□□ -1.68
R3HDM1-205ENST00000425804 AMER2Q8N7J2 671 aa4.56□□□□□ -1.68
R3HDM1-205ENST00000425804 NAT16Q8N8M0 369 aa4.56□□□□□ -1.68
R3HDM1-205ENST00000425804 TXNDC5Q8NBS9 432 aaKnown RBP4.56□□□□□ -1.68
R3HDM1-205ENST00000425804 TSPAN17Q96FV3 270 aa4.56□□□□□ -1.68
R3HDM1-205ENST00000425804 CRAMP1Q96RY5 1269 aa4.56□□□□□ -1.68
R3HDM1-205ENST00000425804 ARID3AQ99856 593 aa4.56□□□□□ -1.68
R3HDM1-205ENST00000425804 TRIM8Q9BZR9 551 aa4.56□□□□□ -1.68
R3HDM1-205ENST00000425804 RXFP1Q9HBX9 757 aa4.56□□□□□ -1.68
R3HDM1-205ENST00000425804 ZNF202O95125 648 aa4.55□□□□□ -1.68
R3HDM1-205ENST00000425804 MAPK8P45983 427 aa4.55□□□□□ -1.68
R3HDM1-205ENST00000425804 MIIPQ5JXC2 388 aa4.55□□□□□ -1.68
R3HDM1-205ENST00000425804 RTP2Q5QGT7 225 aa4.55□□□□□ -1.68
R3HDM1-205ENST00000425804 ALG1LQ6GMV1 187 aa4.55□□□□□ -1.68
R3HDM1-205ENST00000425804 WWC3Q9ULE0 1092 aa4.55□□□□□ -1.68
R3HDM1-205ENST00000425804 ZFR2Q9UPR6 939 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-205ENST00000425804 A0A087X1B8 175 aa4.54□□□□□ -1.68
R3HDM1-205ENST00000425804 PATE3B3GLJ2 98 aa4.54□□□□□ -1.68
R3HDM1-205ENST00000425804 SUPT5HO00267 1087 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-205ENST00000425804 HTR3BO95264 441 aa4.54□□□□□ -1.68
R3HDM1-205ENST00000425804 BPNT1O95861 308 aa4.54□□□□□ -1.68
R3HDM1-205ENST00000425804 DPY19L2P1Q6NXN4 242 aa4.54□□□□□ -1.68
R3HDM1-205ENST00000425804 CRTC3Q6UUV7 619 aa4.54□□□□□ -1.68
R3HDM1-205ENST00000425804 PLEKHH3Q7Z736 793 aa4.54□□□□□ -1.68
R3HDM1-205ENST00000425804 LCORQ96JN0 433 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-205ENST00000425804 GORASP1Q9BQQ3 440 aa4.54□□□□□ -1.68
R3HDM1-205ENST00000425804 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.54□□□□□ -1.68
R3HDM1-205ENST00000425804 DCTN4Q9UJW0 460 aa4.54□□□□□ -1.68
R3HDM1-205ENST00000425804 TLR6Q9Y2C9 796 aa4.54□□□□□ -1.68
R3HDM1-205ENST00000425804 GLI4P10075 376 aa4.53□□□□□ -1.68
R3HDM1-205ENST00000425804 IL12RB1P42701 662 aa4.53□□□□□ -1.68
R3HDM1-205ENST00000425804 DIEXFQ68CQ4 756 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-205ENST00000425804 BNC2Q6ZN30 1099 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-205ENST00000425804 USP33Q8TEY7 942 aa4.53□□□□□ -1.68
R3HDM1-205ENST00000425804 ZG16BQ96DA0 208 aa4.53□□□□□ -1.68
R3HDM1-205ENST00000425804 GFOD1Q9NXC2 390 aa4.53□□□□□ -1.68
R3HDM1-205ENST00000425804 KRTAP29-1A8MX34 341 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-205ENST00000425804 ZNF623O75123 536 aa4.52□□□□□ -1.69
R3HDM1-205ENST00000425804 CYP2C8P10632 490 aa4.52□□□□□ -1.69
R3HDM1-205ENST00000425804 INHBCP55103 352 aa4.52□□□□□ -1.69
R3HDM1-205ENST00000425804 ERICH6Q7L0X2 663 aa4.52□□□□□ -1.69
R3HDM1-205ENST00000425804 ZNF503Q96F45 646 aa4.52□□□□□ -1.69
R3HDM1-205ENST00000425804 SYT3Q9BQG1 590 aa4.52□□□□□ -1.69
R3HDM1-205ENST00000425804 C11orf84Q9BUA3 381 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-205ENST00000425804 POLR3KQ9Y2Y1 108 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-205ENST00000425804 FAM221AA4D161 298 aa4.51□□□□□ -1.69
R3HDM1-205ENST00000425804 DDX3XO00571 662 aaKnown RBP eCLIP4.51□□□□□ -1.69
R3HDM1-205ENST00000425804 NARSO43776 548 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-205ENST00000425804 C8BP07358 591 aa4.51□□□□□ -1.69
R3HDM1-205ENST00000425804 GSTM1P09488 218 aa4.51□□□□□ -1.69
R3HDM1-205ENST00000425804 CORO7P57737 925 aa4.51□□□□□ -1.69
R3HDM1-205ENST00000425804 RNF207Q6ZRF8 634 aa4.51□□□□□ -1.69
R3HDM1-205ENST00000425804 USP48Q86UV5 1035 aa4.51□□□□□ -1.69
R3HDM1-205ENST00000425804 TXNDC2Q86VQ3 553 aa4.51□□□□□ -1.69
R3HDM1-205ENST00000425804 ZNF512BQ96KM6 892 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-205ENST00000425804 TIMELESSQ9UNS1 1208 aa4.51□□□□□ -1.69
R3HDM1-205ENST00000425804 RAG1P15918 1043 aa4.5□□□□□ -1.69
R3HDM1-205ENST00000425804 MCM7P33993 719 aa4.5□□□□□ -1.69
R3HDM1-205ENST00000425804 EPHB4P54760 987 aa4.5□□□□□ -1.69
R3HDM1-205ENST00000425804 FMR1Q06787 632 aaKnown RBP eCLIP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms