RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 MAP2K5Q13163 448 aa25.41■■□□□ 1.66
HMGA2-205ENST00000425208 CCDC82Q8N4S0 544 aa25.41■■□□□ 1.66
HMGA2-205ENST00000425208 PIBF1Q8WXW3 757 aa25.41■■□□□ 1.66
HMGA2-205ENST00000425208 MCOLN1Q9GZU1 580 aa25.41■■□□□ 1.66
HMGA2-205ENST00000425208 PTCH2Q9Y6C5 1203 aa25.41■■□□□ 1.66
HMGA2-205ENST00000425208 CNTNAP5Q8WYK1 1306 aa25.41■■□□□ 1.66
HMGA2-205ENST00000425208 ADD1P35611 737 aaKnown RBP25.4■■□□□ 1.66
HMGA2-205ENST00000425208 CCT2P78371 535 aaKnown RBP25.4■■□□□ 1.66
HMGA2-205ENST00000425208 TRAF1Q13077 416 aa25.4■■□□□ 1.66
HMGA2-205ENST00000425208 IRF5Q13568 498 aa25.4■■□□□ 1.66
HMGA2-205ENST00000425208 NOL8Q76FK4 1167 aaKnown RBP25.4■■□□□ 1.66
HMGA2-205ENST00000425208 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.4■■□□□ 1.66
HMGA2-205ENST00000425208 ANKRD35Q8N283 1001 aa25.4■■□□□ 1.66
HMGA2-205ENST00000425208 TPCN1Q9ULQ1 816 aa25.4■■□□□ 1.66
HMGA2-205ENST00000425208 ABCB11O95342 1321 aa25.4■■□□□ 1.66
HMGA2-205ENST00000425208 HTTP42858 3142 aa25.39■■□□□ 1.66
HMGA2-205ENST00000425208 RBBP6Q7Z6E9 1792 aaKnown RBP25.39■■□□□ 1.66
HMGA2-205ENST00000425208 STK3Q13188 491 aa25.39■■□□□ 1.66
HMGA2-205ENST00000425208 IL27Q8NEV9 243 aa25.39■■□□□ 1.66
HMGA2-205ENST00000425208 USP6NLQ92738 828 aa25.39■■□□□ 1.66
HMGA2-205ENST00000425208 APBA2Q99767 749 aa25.39■■□□□ 1.66
HMGA2-205ENST00000425208 CYP2B6P20813 491 aa25.38■■□□□ 1.65
HMGA2-205ENST00000425208 MUM1L1Q5H9M0 696 aa25.38■■□□□ 1.65
HMGA2-205ENST00000425208 DPP9Q86TI2 863 aa25.38■■□□□ 1.65
HMGA2-205ENST00000425208 DDX11Q96FC9 970 aa25.38■■□□□ 1.65
HMGA2-205ENST00000425208 SLKQ9H2G2 1235 aaPredicted RBP25.38■■□□□ 1.65
HMGA2-205ENST00000425208 SLC5A4Q9NY91 659 aa25.38■■□□□ 1.65
HMGA2-205ENST00000425208 PLXNA1Q9UIW2 1896 aa25.38■■□□□ 1.65
HMGA2-205ENST00000425208 PPP1R11O60927 126 aaPredicted RBP25.37■■□□□ 1.65
HMGA2-205ENST00000425208 XRCC5P13010 732 aaKnown RBP25.37■■□□□ 1.65
HMGA2-205ENST00000425208 FUT2Q10981 343 aa25.37■■□□□ 1.65
HMGA2-205ENST00000425208 NCOA5Q9HCD5 579 aaKnown RBP25.37■■□□□ 1.65
HMGA2-205ENST00000425208 PCDHA1Q9Y5I3 950 aa25.37■■□□□ 1.65
HMGA2-205ENST00000425208 PFASO15067 1338 aa25.37■■□□□ 1.65
HMGA2-205ENST00000425208 NFIBO00712 420 aa25.37■■□□□ 1.65
HMGA2-205ENST00000425208 CPLX1O14810 134 aa25.37■■□□□ 1.65
HMGA2-205ENST00000425208 ST18O60284 1047 aa25.37■■□□□ 1.65
HMGA2-205ENST00000425208 SLAIN1Q8ND83 568 aa25.37■■□□□ 1.65
HMGA2-205ENST00000425208 A1CFQ9NQ94 594 aaKnown RBP25.37■■□□□ 1.65
HMGA2-205ENST00000425208 MRPL11Q9Y3B7 192 aaKnown RBP25.37■■□□□ 1.65
HMGA2-205ENST00000425208 CENPFP49454 3210 aa25.36■■□□□ 1.65
HMGA2-205ENST00000425208 ADCY3O60266 1144 aa25.36■■□□□ 1.65
HMGA2-205ENST00000425208 HOXC6P09630 235 aa25.36■■□□□ 1.65
HMGA2-205ENST00000425208 CPLX2Q6PUV4 134 aaKnown RBP25.36■■□□□ 1.65
HMGA2-205ENST00000425208 NSMFQ6X4W1 530 aa25.36■■□□□ 1.65
HMGA2-205ENST00000425208 PXYLP1Q8TE99 480 aa25.36■■□□□ 1.65
HMGA2-205ENST00000425208 CLEC4DQ8WXI8 215 aa25.36■■□□□ 1.65
HMGA2-205ENST00000425208 hCG_1642624A0A1W2PR95 340 aa25.35■■□□□ 1.65
HMGA2-205ENST00000425208 PFKFB2O60825 505 aa25.35■■□□□ 1.65
HMGA2-205ENST00000425208 PGK2P07205 417 aa25.35■■□□□ 1.65
HMGA2-205ENST00000425208 SLC9C1Q4G0N8 1177 aa25.35■■□□□ 1.65
HMGA2-205ENST00000425208 COBLO75128 1261 aa25.34■■□□□ 1.65
HMGA2-205ENST00000425208 IFNAR1P17181 557 aa25.34■■□□□ 1.65
HMGA2-205ENST00000425208 GRK4P32298 578 aa25.34■■□□□ 1.65
HMGA2-205ENST00000425208 SCRN1Q12765 414 aa25.34■■□□□ 1.65
HMGA2-205ENST00000425208 NTRK3Q16288 839 aa25.34■■□□□ 1.65
HMGA2-205ENST00000425208 ME3Q16798 604 aa25.34■■□□□ 1.65
HMGA2-205ENST00000425208 TRMT44Q8IYL2 757 aaKnown RBP25.34■■□□□ 1.65
HMGA2-205ENST00000425208 CYP39A1Q9NYL5 469 aa25.34■■□□□ 1.65
HMGA2-205ENST00000425208 RBM27Q9P2N5 1060 aaKnown RBP25.34■■□□□ 1.65
HMGA2-205ENST00000425208 LIMCH1Q9UPQ0 1083 aa25.34■■□□□ 1.65
HMGA2-205ENST00000425208 V9GY48 417 aaPredicted RBP25.34■■□□□ 1.65
HMGA2-205ENST00000425208 ELNP15502 786 aa25.33■■□□□ 1.65
HMGA2-205ENST00000425208 RNF207Q6ZRF8 634 aa25.33■■□□□ 1.65
HMGA2-205ENST00000425208 MCF2L2Q86YR7 1114 aa25.33■■□□□ 1.65
HMGA2-205ENST00000425208 NPLOC4Q8TAT6 608 aa25.33■■□□□ 1.65
HMGA2-205ENST00000425208 DNAJC25-GNG10A0A024R161 153 aa25.32■■□□□ 1.64
HMGA2-205ENST00000425208 PTPDC1A2A3K4 754 aa25.32■■□□□ 1.64
HMGA2-205ENST00000425208 POTEB2H3BUK9 544 aa25.32■■□□□ 1.64
HMGA2-205ENST00000425208 CDKL5O76039 1030 aa25.32■■□□□ 1.64
HMGA2-205ENST00000425208 AKAP17AQ02040 695 aaKnown RBP25.32■■□□□ 1.64
HMGA2-205ENST00000425208 HEATR3Q7Z4Q2 680 aa25.32■■□□□ 1.64
HMGA2-205ENST00000425208 RGS22Q8NE09 1264 aa25.32■■□□□ 1.64
HMGA2-205ENST00000425208 TRIB2Q92519 343 aa25.32■■□□□ 1.64
HMGA2-205ENST00000425208 PHKBQ93100 1093 aa25.32■■□□□ 1.64
HMGA2-205ENST00000425208 RNF26Q9BY78 433 aaPredicted RBP25.32■■□□□ 1.64
HMGA2-205ENST00000425208 MAF1Q9H063 256 aa25.32■■□□□ 1.64
HMGA2-205ENST00000425208 DIS3Q9Y2L1 958 aaKnown RBP25.32■■□□□ 1.64
HMGA2-205ENST00000425208 LARGE1O95461 756 aa25.31■■□□□ 1.64
HMGA2-205ENST00000425208 ZNF792Q3KQV3 632 aa25.31■■□□□ 1.64
HMGA2-205ENST00000425208 TRIM22Q8IYM9 498 aa25.31■■□□□ 1.64
HMGA2-205ENST00000425208 SH3TC2Q8TF17 1288 aa25.31■■□□□ 1.64
HMGA2-205ENST00000425208 GTF3C6Q969F1 213 aa25.31■■□□□ 1.64
HMGA2-205ENST00000425208 MAML3Q96JK9 1138 aa25.31■■□□□ 1.64
HMGA2-205ENST00000425208 SLC26A6Q9BXS9 759 aa25.31■■□□□ 1.64
HMGA2-205ENST00000425208 LCTP09848 1927 aa25.3■■□□□ 1.64
HMGA2-205ENST00000425208 hCG_1984214I3L0E3 225 aa25.3■■□□□ 1.64
HMGA2-205ENST00000425208 PRPF3O43395 683 aaKnown RBP25.3■■□□□ 1.64
HMGA2-205ENST00000425208 HMGCRP04035 888 aa25.3■■□□□ 1.64
HMGA2-205ENST00000425208 BAATQ14032 418 aaPredicted RBP25.3■■□□□ 1.64
HMGA2-205ENST00000425208 CCL14Q16627 93 aa25.3■■□□□ 1.64
HMGA2-205ENST00000425208 SLC30A10Q6XR72 485 aa25.3■■□□□ 1.64
HMGA2-205ENST00000425208 TNS4Q8IZW8 715 aa25.3■■□□□ 1.64
HMGA2-205ENST00000425208 ZNF713Q8N859 430 aaPredicted RBP25.3■■□□□ 1.64
HMGA2-205ENST00000425208 BIN2Q9UBW5 565 aaPredicted RBP25.3■■□□□ 1.64
HMGA2-205ENST00000425208 CALML3P27482 149 aa25.29■■□□□ 1.64
HMGA2-205ENST00000425208 RPS6P62753 249 aaKnown RBP25.29■■□□□ 1.64
HMGA2-205ENST00000425208 SSRP1Q08945 709 aaKnown RBP25.29■■□□□ 1.64
HMGA2-205ENST00000425208 PFKFB3Q16875 520 aaPredicted RBP25.29■■□□□ 1.64
HMGA2-205ENST00000425208 OLFML2BQ68BL8 750 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms