RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 WDR78Q5VTH9 848 aa15.46■□□□□ 0.07
PRPF39-202ENST00000424478 REPS2Q8NFH8 660 aa15.46■□□□□ 0.07
PRPF39-202ENST00000424478 RBPJLQ9UBG7 517 aa15.46■□□□□ 0.07
PRPF39-202ENST00000424478 CPA4Q9UI42 421 aa15.46■□□□□ 0.07
PRPF39-202ENST00000424478 WNT7AO00755 349 aa15.46■□□□□ 0.06
PRPF39-202ENST00000424478 ZBED4O75132 1171 aa15.46■□□□□ 0.06
PRPF39-202ENST00000424478 HOXA7P31268 230 aaPredicted RBP15.46■□□□□ 0.06
PRPF39-202ENST00000424478 UBXN2AP68543 259 aa15.46■□□□□ 0.06
PRPF39-202ENST00000424478 GNL2Q13823 731 aaKnown RBP15.46■□□□□ 0.06
PRPF39-202ENST00000424478 WASF1Q92558 559 aa15.46■□□□□ 0.06
PRPF39-202ENST00000424478 TNPO1Q92973 898 aaKnown RBP15.46■□□□□ 0.06
PRPF39-202ENST00000424478 TCHHQ07283 1943 aa15.46■□□□□ 0.06
PRPF39-202ENST00000424478 VEGFBP49765 207 aa15.45■□□□□ 0.06
PRPF39-202ENST00000424478 TFIP11Q9UBB9 837 aaKnown RBP15.45■□□□□ 0.06
PRPF39-202ENST00000424478 CNMDO75829 334 aa15.45■□□□□ 0.06
PRPF39-202ENST00000424478 F13A1P00488 732 aa15.45■□□□□ 0.06
PRPF39-202ENST00000424478 PDCP20941 246 aa15.45■□□□□ 0.06
PRPF39-202ENST00000424478 SMARCA1P28370 1054 aa15.45■□□□□ 0.06
PRPF39-202ENST00000424478 FCHSD1Q86WN1 690 aa15.45■□□□□ 0.06
PRPF39-202ENST00000424478 HOXC10Q9NYD6 342 aa15.45■□□□□ 0.06
PRPF39-202ENST00000424478 UNCXA6NJT0 531 aa15.44■□□□□ 0.06
PRPF39-202ENST00000424478 ICAM1P05362 532 aa15.44■□□□□ 0.06
PRPF39-202ENST00000424478 KIF3AQ9Y496 699 aa15.44■□□□□ 0.06
PRPF39-202ENST00000424478 RESTQ13127 1097 aa15.44■□□□□ 0.06
PRPF39-202ENST00000424478 NSMFQ6X4W1 530 aa15.44■□□□□ 0.06
PRPF39-202ENST00000424478 PIK3AP1Q6ZUJ8 805 aa15.44■□□□□ 0.06
PRPF39-202ENST00000424478 CCDC102AQ96A19 550 aa15.44■□□□□ 0.06
PRPF39-202ENST00000424478 PORCNQ9H237 461 aa15.44■□□□□ 0.06
PRPF39-202ENST00000424478 PLA2G6O60733 806 aa15.44■□□□□ 0.06
PRPF39-202ENST00000424478 LBX2Q6XYB7 198 aa15.44■□□□□ 0.06
PRPF39-202ENST00000424478 IFNL1Q8IU54 200 aa15.44■□□□□ 0.06
PRPF39-202ENST00000424478 TRERF1Q96PN7 1200 aa15.44■□□□□ 0.06
PRPF39-202ENST00000424478 PSTPIP2Q9H939 334 aa15.44■□□□□ 0.06
PRPF39-202ENST00000424478 ADAMTS5Q9UNA0 930 aa15.44■□□□□ 0.06
PRPF39-202ENST00000424478 WDR33Q9C0J8 1336 aaKnown RBP15.43■□□□□ 0.06
PRPF39-202ENST00000424478 NCLP19338 710 aaKnown RBP15.43■□□□□ 0.06
PRPF39-202ENST00000424478 OSBPP22059 807 aa15.43■□□□□ 0.06
PRPF39-202ENST00000424478 STAT3P40763 770 aa15.43■□□□□ 0.06
PRPF39-202ENST00000424478 DNM1Q05193 864 aaKnown RBP15.43■□□□□ 0.06
PRPF39-202ENST00000424478 TAF1CQ15572 869 aaPredicted RBP15.43■□□□□ 0.06
PRPF39-202ENST00000424478 NCAPG2Q86XI2 1143 aa15.43■□□□□ 0.06
PRPF39-202ENST00000424478 RNF146Q9NTX7 359 aa15.43■□□□□ 0.06
PRPF39-202ENST00000424478 RASSF10A6NK89 507 aa15.43■□□□□ 0.06
PRPF39-202ENST00000424478 ADCY7P51828 1080 aa15.43■□□□□ 0.06
PRPF39-202ENST00000424478 BLIDQ8IZY5 108 aa15.43■□□□□ 0.06
PRPF39-202ENST00000424478 EFCC1Q9HA90 598 aa15.43■□□□□ 0.06
PRPF39-202ENST00000424478 XBP1P17861 261 aa15.42■□□□□ 0.06
PRPF39-202ENST00000424478 KRT2P35908 639 aa15.42■□□□□ 0.06
PRPF39-202ENST00000424478 SLC30A10Q6XR72 485 aa15.42■□□□□ 0.06
PRPF39-202ENST00000424478 CLEC4DQ8WXI8 215 aa15.42■□□□□ 0.06
PRPF39-202ENST00000424478 ZMYND12Q9H0C1 365 aa15.42■□□□□ 0.06
PRPF39-202ENST00000424478 PCDHA6Q9UN73 950 aa15.42■□□□□ 0.06
PRPF39-202ENST00000424478 PCDHA8Q9Y5H6 950 aa15.42■□□□□ 0.06
PRPF39-202ENST00000424478 MANSC4A6NHS7 340 aaPredicted RBP15.42■□□□□ 0.06
PRPF39-202ENST00000424478 CALML3P27482 149 aa15.42■□□□□ 0.06
PRPF39-202ENST00000424478 ANKRD23Q86SG2 305 aa15.42■□□□□ 0.06
PRPF39-202ENST00000424478 MOV10L1Q9BXT6 1211 aaKnown RBP15.42■□□□□ 0.06
PRPF39-202ENST00000424478 SPATC1LQ9H0A9 340 aa15.42■□□□□ 0.06
PRPF39-202ENST00000424478 COL20A1Q9P218 1284 aa15.42■□□□□ 0.06
PRPF39-202ENST00000424478 RBM27Q9P2N5 1060 aaKnown RBP15.42■□□□□ 0.06
PRPF39-202ENST00000424478 PCDHA4Q9UN74 947 aa15.42■□□□□ 0.06
PRPF39-202ENST00000424478 MRVI1Q9Y6F6 885 aa15.42■□□□□ 0.06
PRPF39-202ENST00000424478 MEIS2O14770 477 aa15.42■□□□□ 0.06
PRPF39-202ENST00000424478 NUCB2P80303 420 aa15.42■□□□□ 0.06
PRPF39-202ENST00000424478 CRHR2Q13324 411 aa15.42■□□□□ 0.06
PRPF39-202ENST00000424478 TSKSQ9UJT2 592 aa15.42■□□□□ 0.06
PRPF39-202ENST00000424478 INF2Q27J81 1249 aa15.41■□□□□ 0.06
PRPF39-202ENST00000424478 TEX13BQ9BXU2 312 aa15.41■□□□□ 0.06
PRPF39-202ENST00000424478 CNPY2Q9Y2B0 182 aa15.41■□□□□ 0.06
PRPF39-202ENST00000424478 TBC1D8O95759 1140 aa15.41■□□□□ 0.06
PRPF39-202ENST00000424478 ERCC3P19447 782 aa15.41■□□□□ 0.06
PRPF39-202ENST00000424478 SAFBQ15424 915 aaKnown RBP eCLIP15.41■□□□□ 0.06
PRPF39-202ENST00000424478 C6orf50Q9HD87 102 aa15.41■□□□□ 0.06
PRPF39-202ENST00000424478 DOCK3Q8IZD9 2030 aa15.41■□□□□ 0.06
PRPF39-202ENST00000424478 PABPC4Q13310 644 aaKnown RBP eCLIP15.4■□□□□ 0.06
PRPF39-202ENST00000424478 REXO1Q8N1G1 1221 aaKnown RBP15.4■□□□□ 0.06
PRPF39-202ENST00000424478 CCDC148Q8NFR7 591 aa15.4■□□□□ 0.06
PRPF39-202ENST00000424478 CUL5Q93034 780 aa15.4■□□□□ 0.06
PRPF39-202ENST00000424478 PGK2P07205 417 aa15.4■□□□□ 0.06
PRPF39-202ENST00000424478 ERVK-9P63128 1117 aa15.4■□□□□ 0.06
PRPF39-202ENST00000424478 ERVK-24P63145 666 aa15.4■□□□□ 0.06
PRPF39-202ENST00000424478 NOSTRINQ8IVI9 506 aa15.4■□□□□ 0.06
PRPF39-202ENST00000424478 TNFRSF25Q93038 417 aa15.4■□□□□ 0.06
PRPF39-202ENST00000424478 TESPA1A2RU30 521 aaPredicted RBP15.4■□□□□ 0.06
PRPF39-202ENST00000424478 TRPA1O75762 1119 aa15.4■□□□□ 0.06
PRPF39-202ENST00000424478 RIC8AQ9NPQ8 531 aa15.4■□□□□ 0.06
PRPF39-202ENST00000424478 PNMA3Q9UL41 463 aa15.4■□□□□ 0.06
PRPF39-202ENST00000424478 CIZ1Q9ULV3 898 aaPredicted RBP15.4■□□□□ 0.06
PRPF39-202ENST00000424478 ZSWIM8A7E2V4 1837 aa15.39■□□□□ 0.05
PRPF39-202ENST00000424478 A0A0G2JMZ2 1700 aa15.39■□□□□ 0.05
PRPF39-202ENST00000424478 M0R2N6 131 aa15.39■□□□□ 0.05
PRPF39-202ENST00000424478 FIBPO43427 364 aa15.39■□□□□ 0.05
PRPF39-202ENST00000424478 TOB1P50616 345 aaPredicted RBP15.39■□□□□ 0.05
PRPF39-202ENST00000424478 RPS6P62753 249 aaKnown RBP15.39■□□□□ 0.05
PRPF39-202ENST00000424478 NOGQ13253 232 aa15.39■□□□□ 0.05
PRPF39-202ENST00000424478 BAATQ14032 418 aaPredicted RBP15.39■□□□□ 0.05
PRPF39-202ENST00000424478 SH3GLB2Q9NR46 395 aa15.39■□□□□ 0.05
PRPF39-202ENST00000424478 DNAH12Q6ZR08 3092 aa15.39■□□□□ 0.05
PRPF39-202ENST00000424478 C1QTNF8P60827 252 aa15.39■□□□□ 0.05
PRPF39-202ENST00000424478 CNTN2Q02246 1040 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms