RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 PNMA6FA0A0J9YX94 578 aa29.44■■■□□ 2.3
TSPAN3-203ENST00000424443 GRK4P32298 578 aa29.44■■■□□ 2.3
TSPAN3-203ENST00000424443 USP6NLQ92738 828 aa29.44■■■□□ 2.3
TSPAN3-203ENST00000424443 ZNF274Q96GC6 653 aaPredicted RBP29.44■■■□□ 2.3
TSPAN3-203ENST00000424443 BIN2Q9UBW5 565 aaPredicted RBP29.44■■■□□ 2.3
TSPAN3-203ENST00000424443 HPS5Q9UPZ3 1129 aa29.44■■■□□ 2.3
TSPAN3-203ENST00000424443 XRCC5P13010 732 aaKnown RBP29.43■■■□□ 2.3
TSPAN3-203ENST00000424443 TAL1P17542 331 aaPredicted RBP29.43■■■□□ 2.3
TSPAN3-203ENST00000424443 PDIA3P30101 505 aaKnown RBP29.43■■■□□ 2.3
TSPAN3-203ENST00000424443 AK2P54819 239 aa29.43■■■□□ 2.3
TSPAN3-203ENST00000424443 TRMT44Q8IYL2 757 aaKnown RBP29.43■■■□□ 2.3
TSPAN3-203ENST00000424443 PXYLP1Q8TE99 480 aa29.43■■■□□ 2.3
TSPAN3-203ENST00000424443 ABCB11O95342 1321 aa29.43■■■□□ 2.3
TSPAN3-203ENST00000424443 SLC35G1Q2M3R5 365 aa29.42■■■□□ 2.3
TSPAN3-203ENST00000424443 MUM1L1Q5H9M0 696 aa29.42■■■□□ 2.3
TSPAN3-203ENST00000424443 BAZ2BQ9UIF8 2168 aaKnown RBP29.42■■■□□ 2.3
TSPAN3-203ENST00000424443 MRPL11Q9Y3B7 192 aaKnown RBP29.42■■■□□ 2.3
TSPAN3-203ENST00000424443 PFASO15067 1338 aa29.41■■■□□ 2.3
TSPAN3-203ENST00000424443 CDC27P30260 824 aa29.41■■■□□ 2.3
TSPAN3-203ENST00000424443 ADD1P35611 737 aaKnown RBP29.41■■■□□ 2.3
TSPAN3-203ENST00000424443 CCT2P78371 535 aaKnown RBP29.41■■■□□ 2.3
TSPAN3-203ENST00000424443 NSMFQ6X4W1 530 aa29.41■■■□□ 2.3
TSPAN3-203ENST00000424443 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.41■■■□□ 2.3
TSPAN3-203ENST00000424443 ZNF236Q9UL36 1845 aa29.41■■■□□ 2.3
TSPAN3-203ENST00000424443 PGK2P07205 417 aa29.4■■■□□ 2.3
TSPAN3-203ENST00000424443 ELNP15502 786 aa29.4■■■□□ 2.3
TSPAN3-203ENST00000424443 NOL8Q76FK4 1167 aaKnown RBP29.4■■■□□ 2.3
TSPAN3-203ENST00000424443 SH3TC2Q8TF17 1288 aa29.4■■■□□ 2.3
TSPAN3-203ENST00000424443 TBC1D32Q96NH3 1257 aa29.4■■■□□ 2.3
TSPAN3-203ENST00000424443 PCDHA1Q9Y5I3 950 aa29.4■■■□□ 2.3
TSPAN3-203ENST00000424443 NID2Q14112 1375 aa29.4■■■□□ 2.3
TSPAN3-203ENST00000424443 HOXC6P09630 235 aa29.4■■■□□ 2.3
TSPAN3-203ENST00000424443 STK3Q13188 491 aa29.4■■■□□ 2.3
TSPAN3-203ENST00000424443 A1CFQ9NQ94 594 aaKnown RBP29.4■■■□□ 2.3
TSPAN3-203ENST00000424443 FAM217BQ9NTX9 383 aaPredicted RBP29.4■■■□□ 2.3
TSPAN3-203ENST00000424443 ZNFX1Q9P2E3 1918 aaKnown RBP29.39■■■□□ 2.3
TSPAN3-203ENST00000424443 PTPDC1A2A3K4 754 aa29.39■■■□□ 2.3
TSPAN3-203ENST00000424443 COBLO75128 1261 aa29.39■■■□□ 2.3
TSPAN3-203ENST00000424443 NPLOC4Q8TAT6 608 aa29.39■■■□□ 2.3
TSPAN3-203ENST00000424443 KIF2CQ99661 725 aa29.39■■■□□ 2.3
TSPAN3-203ENST00000424443 POTEB2H3BUK9 544 aa29.38■■■□□ 2.29
TSPAN3-203ENST00000424443 NFIBO00712 420 aa29.38■■■□□ 2.29
TSPAN3-203ENST00000424443 CPLX1O14810 134 aa29.38■■■□□ 2.29
TSPAN3-203ENST00000424443 UBXN2AP68543 259 aa29.38■■■□□ 2.29
TSPAN3-203ENST00000424443 RABEP1Q15276 862 aa29.38■■■□□ 2.29
TSPAN3-203ENST00000424443 MCF2L2Q86YR7 1114 aa29.38■■■□□ 2.29
TSPAN3-203ENST00000424443 SLKQ9H2G2 1235 aaPredicted RBP29.38■■■□□ 2.29
TSPAN3-203ENST00000424443 CNTNAP5Q8WYK1 1306 aa29.37■■■□□ 2.29
TSPAN3-203ENST00000424443 HMGCRP04035 888 aa29.37■■■□□ 2.29
TSPAN3-203ENST00000424443 CPLX2Q6PUV4 134 aaKnown RBP29.37■■■□□ 2.29
TSPAN3-203ENST00000424443 CLEC4DQ8WXI8 215 aa29.37■■■□□ 2.29
TSPAN3-203ENST00000424443 NCOA5Q9HCD5 579 aaKnown RBP29.37■■■□□ 2.29
TSPAN3-203ENST00000424443 TPCN1Q9ULQ1 816 aa29.37■■■□□ 2.29
TSPAN3-203ENST00000424443 DIS3Q9Y2L1 958 aaKnown RBP29.37■■■□□ 2.29
TSPAN3-203ENST00000424443 SMCHD1A6NHR9 2005 aa29.37■■■□□ 2.29
TSPAN3-203ENST00000424443 PPP1R11O60927 126 aaPredicted RBP29.36■■■□□ 2.29
TSPAN3-203ENST00000424443 AKAP17AQ02040 695 aaKnown RBP29.36■■■□□ 2.29
TSPAN3-203ENST00000424443 CCL14Q16627 93 aa29.36■■■□□ 2.29
TSPAN3-203ENST00000424443 RNF207Q6ZRF8 634 aa29.36■■■□□ 2.29
TSPAN3-203ENST00000424443 TRIB2Q92519 343 aa29.36■■■□□ 2.29
TSPAN3-203ENST00000424443 CYP39A1Q9NYL5 469 aa29.36■■■□□ 2.29
TSPAN3-203ENST00000424443 hCG_1642624A0A1W2PR95 340 aa29.35■■■□□ 2.29
TSPAN3-203ENST00000424443 ZNF792Q3KQV3 632 aa29.35■■■□□ 2.29
TSPAN3-203ENST00000424443 MFSD14CQ5VZR4 134 aa29.35■■■□□ 2.29
TSPAN3-203ENST00000424443 ABHD8Q96I13 439 aa29.35■■■□□ 2.29
TSPAN3-203ENST00000424443 V9GY48 417 aaPredicted RBP29.35■■■□□ 2.29
TSPAN3-203ENST00000424443 DNAJC25-GNG10A0A024R161 153 aa29.35■■■□□ 2.29
TSPAN3-203ENST00000424443 BAATQ14032 418 aaPredicted RBP29.35■■■□□ 2.29
TSPAN3-203ENST00000424443 MAML3Q96JK9 1138 aa29.35■■■□□ 2.29
TSPAN3-203ENST00000424443 ST18O60284 1047 aa29.34■■■□□ 2.29
TSPAN3-203ENST00000424443 INHAP05111 366 aa29.34■■■□□ 2.29
TSPAN3-203ENST00000424443 CALML3P27482 149 aa29.34■■■□□ 2.29
TSPAN3-203ENST00000424443 RGS22Q8NE09 1264 aa29.34■■■□□ 2.29
TSPAN3-203ENST00000424443 IL27Q8NEV9 243 aa29.34■■■□□ 2.29
TSPAN3-203ENST00000424443 ARMC5Q96C12 935 aa29.34■■■□□ 2.29
TSPAN3-203ENST00000424443 MAF1Q9H063 256 aa29.34■■■□□ 2.29
TSPAN3-203ENST00000424443 RBM27Q9P2N5 1060 aaKnown RBP29.34■■■□□ 2.29
TSPAN3-203ENST00000424443 FUT2Q10981 343 aa29.33■■■□□ 2.29
TSPAN3-203ENST00000424443 OLFML2BQ68BL8 750 aa29.33■■■□□ 2.29
TSPAN3-203ENST00000424443 HEATR3Q7Z4Q2 680 aa29.33■■■□□ 2.29
TSPAN3-203ENST00000424443 PLXNA1Q9UIW2 1896 aa29.32■■■□□ 2.28
TSPAN3-203ENST00000424443 PFKFB2O60825 505 aa29.32■■■□□ 2.28
TSPAN3-203ENST00000424443 CFBP00751 764 aa29.32■■■□□ 2.28
TSPAN3-203ENST00000424443 RPS6P62753 249 aaKnown RBP29.32■■■□□ 2.28
TSPAN3-203ENST00000424443 FLRT1Q9NZU1 646 aa29.32■■■□□ 2.28
TSPAN3-203ENST00000424443 MYCP01106 439 aaPredicted RBP29.31■■■□□ 2.28
TSPAN3-203ENST00000424443 IFNAR1P17181 557 aa29.31■■■□□ 2.28
TSPAN3-203ENST00000424443 CNTN2Q02246 1040 aa29.31■■■□□ 2.28
TSPAN3-203ENST00000424443 TRIM22Q8IYM9 498 aa29.31■■■□□ 2.28
TSPAN3-203ENST00000424443 PHKBQ93100 1093 aa29.31■■■□□ 2.28
TSPAN3-203ENST00000424443 ZNF333Q96JL9 665 aa29.31■■■□□ 2.28
TSPAN3-203ENST00000424443 ADD3Q9UEY8 706 aaKnown RBP29.31■■■□□ 2.28
TSPAN3-203ENST00000424443 LIMCH1Q9UPQ0 1083 aa29.31■■■□□ 2.28
TSPAN3-203ENST00000424443 CDKL5O76039 1030 aa29.3■■■□□ 2.28
TSPAN3-203ENST00000424443 SCRN1Q12765 414 aa29.3■■■□□ 2.28
TSPAN3-203ENST00000424443 NTRK3Q16288 839 aa29.3■■■□□ 2.28
TSPAN3-203ENST00000424443 SLC30A10Q6XR72 485 aa29.3■■■□□ 2.28
TSPAN3-203ENST00000424443 FAM133AQ8N9E0 248 aa29.3■■■□□ 2.28
TSPAN3-203ENST00000424443 SLC26A6Q9BXS9 759 aa29.3■■■□□ 2.28
TSPAN3-203ENST00000424443 SSRP1Q08945 709 aaKnown RBP29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms