RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 BRF1Q92994 677 aa13.59□□□□□ -0.23
LMO3-206ENST00000424192 MFRPQ9BY79 579 aa13.59□□□□□ -0.23
LMO3-206ENST00000424192 SENP2Q9HC62 589 aa13.59□□□□□ -0.23
LMO3-206ENST00000424192 RAVER2Q9HCJ3 691 aaKnown RBP13.59□□□□□ -0.23
LMO3-206ENST00000424192 SEC63Q9UGP8 760 aaKnown RBP13.59□□□□□ -0.23
LMO3-206ENST00000424192 PFASO15067 1338 aa13.59□□□□□ -0.23
LMO3-206ENST00000424192 HOXC6P09630 235 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 CTGFP29279 349 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 RBM25P49756 843 aaKnown RBP13.58□□□□□ -0.24
LMO3-206ENST00000424192 FLT3LGP49771 235 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 METAP2P50579 478 aaKnown RBP eCLIP13.58□□□□□ -0.24
LMO3-206ENST00000424192 MAP2K5Q13163 448 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 SLC9C1Q4G0N8 1177 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 MORN1Q5T089 497 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 COL13A1Q5TAT6 717 aaPredicted RBP13.58□□□□□ -0.24
LMO3-206ENST00000424192 CCDC174Q6PII3 467 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 NBPF11Q86T75 865 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 TNS4Q8IZW8 715 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 FANCBQ8NB91 859 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 CHMP4CQ96CF2 233 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 TCEANC2Q96MN5 208 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 MMP19Q99542 508 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 C22orf23Q9BZE7 217 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 UPF3BQ9BZI7 483 aaKnown RBP13.58□□□□□ -0.24
LMO3-206ENST00000424192 ALDH8A1Q9H2A2 487 aaPredicted RBP13.58□□□□□ -0.24
LMO3-206ENST00000424192 GPHNQ9NQX3 736 aaPredicted RBP13.58□□□□□ -0.24
LMO3-206ENST00000424192 RNF146Q9NTX7 359 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 PDRG1Q9NUG6 133 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 RBM27Q9P2N5 1060 aaKnown RBP13.58□□□□□ -0.24
LMO3-206ENST00000424192 PTCH2Q9Y6C5 1203 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 ZNF536O15090 1300 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 ABCB11O95342 1321 aa13.58□□□□□ -0.24
LMO3-206ENST00000424192 RBBP6Q7Z6E9 1792 aaKnown RBP13.58□□□□□ -0.24
LMO3-206ENST00000424192 ZBTB5O15062 677 aa13.57□□□□□ -0.24
LMO3-206ENST00000424192 SEC24BO95487 1268 aa13.57□□□□□ -0.24
LMO3-206ENST00000424192 ADORA2AP29274 412 aa13.57□□□□□ -0.24
LMO3-206ENST00000424192 EVCP57679 992 aa13.57□□□□□ -0.24
LMO3-206ENST00000424192 TMTC3Q6ZXV5 915 aa13.57□□□□□ -0.24
LMO3-206ENST00000424192 STAG2Q8N3U4 1231 aa13.57□□□□□ -0.24
LMO3-206ENST00000424192 MTMR8Q96EF0 704 aa13.57□□□□□ -0.24
LMO3-206ENST00000424192 RRP36Q96EU6 259 aaKnown RBP13.57□□□□□ -0.24
LMO3-206ENST00000424192 MYL10Q9BUA6 226 aa13.57□□□□□ -0.24
LMO3-206ENST00000424192 AMNQ9BXJ7 453 aa13.57□□□□□ -0.24
LMO3-206ENST00000424192 UBA5Q9GZZ9 404 aa13.57□□□□□ -0.24
LMO3-206ENST00000424192 RIOX1Q9H6W3 641 aa13.57□□□□□ -0.24
LMO3-206ENST00000424192 NAP1L2Q9ULW6 460 aaPredicted RBP13.57□□□□□ -0.24
LMO3-206ENST00000424192 hCG_1984214I3L0E3 225 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 ADCY3O60266 1144 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 PEX10O60683 326 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 HMGCRP04035 888 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 ALAS1P13196 640 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 CPA1P15085 419 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 GRK4P32298 578 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 UBXN2AP68543 259 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 COL9A3Q14050 684 aaPredicted RBP13.56□□□□□ -0.24
LMO3-206ENST00000424192 QRICH1Q2TAL8 776 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 CPLX2Q6PUV4 134 aaKnown RBP13.56□□□□□ -0.24
LMO3-206ENST00000424192 DPP9Q86TI2 863 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 FBXO11Q86XK2 927 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 TEX2Q8IWB9 1127 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 ANKRD35Q8N283 1001 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 ZNF713Q8N859 430 aaPredicted RBP13.56□□□□□ -0.24
LMO3-206ENST00000424192 USP6NLQ92738 828 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 DDX11Q96FC9 970 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 ZNF274Q96GC6 653 aaPredicted RBP13.56□□□□□ -0.24
LMO3-206ENST00000424192 AGBL1Q96MI9 1066 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 TRERF1Q96PN7 1200 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 JMJD4Q9H9V9 463 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 GJD2Q9UKL4 321 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 HPS5Q9UPZ3 1129 aa13.56□□□□□ -0.24
LMO3-206ENST00000424192 DIS3Q9Y2L1 958 aaKnown RBP13.56□□□□□ -0.24
LMO3-206ENST00000424192 MRPL11Q9Y3B7 192 aaKnown RBP13.56□□□□□ -0.24
LMO3-206ENST00000424192 PNMA6FA0A0J9YX94 578 aa13.55□□□□□ -0.24
LMO3-206ENST00000424192 POTEFA5A3E0 1075 aa13.55□□□□□ -0.24
LMO3-206ENST00000424192 IRX5P78411 483 aaPredicted RBP13.55□□□□□ -0.24
LMO3-206ENST00000424192 CAP1Q01518 475 aa13.55□□□□□ -0.24
LMO3-206ENST00000424192 APOBRQ0VD83 1088 aa13.55□□□□□ -0.24
LMO3-206ENST00000424192 RABEP1Q15276 862 aa13.55□□□□□ -0.24
LMO3-206ENST00000424192 IER5LQ5T953 404 aa13.55□□□□□ -0.24
LMO3-206ENST00000424192 OLFML2BQ68BL8 750 aa13.55□□□□□ -0.24
LMO3-206ENST00000424192 MCF2L2Q86YR7 1114 aa13.55□□□□□ -0.24
LMO3-206ENST00000424192 MSL3Q8N5Y2 521 aaKnown RBP13.55□□□□□ -0.24
LMO3-206ENST00000424192 SAMD3Q8N6K7 520 aa13.55□□□□□ -0.24
LMO3-206ENST00000424192 ARMC5Q96C12 935 aa13.55□□□□□ -0.24
LMO3-206ENST00000424192 HOMER2Q9NSB8 354 aa13.55□□□□□ -0.24
LMO3-206ENST00000424192 BRPF3Q9ULD4 1205 aa13.55□□□□□ -0.24
LMO3-206ENST00000424192 GABRQQ9UN88 632 aa13.55□□□□□ -0.24
LMO3-206ENST00000424192 LOC102724159A0A0B4J2E5 919 aa13.54□□□□□ -0.24
LMO3-206ENST00000424192 RXRAP19793 462 aa13.54□□□□□ -0.24
LMO3-206ENST00000424192 SLC4A3P48751 1232 aa13.54□□□□□ -0.24
LMO3-206ENST00000424192 TOB2Q14106 344 aaPredicted RBP13.54□□□□□ -0.24
LMO3-206ENST00000424192 PWP2Q15269 919 aaKnown RBP13.54□□□□□ -0.24
LMO3-206ENST00000424192 MFSD14CQ5VZR4 134 aa13.54□□□□□ -0.24
LMO3-206ENST00000424192 HOMER1Q86YM7 354 aa13.54□□□□□ -0.24
LMO3-206ENST00000424192 CCDC144CPQ8IYA2 1237 aa13.54□□□□□ -0.24
LMO3-206ENST00000424192 RGS22Q8NE09 1264 aa13.54□□□□□ -0.24
LMO3-206ENST00000424192 FBXO22Q8NEZ5 403 aa13.54□□□□□ -0.24
LMO3-206ENST00000424192 SLC39A7Q92504 469 aa13.54□□□□□ -0.24
LMO3-206ENST00000424192 MPHOSPH6Q99547 160 aaKnown RBP13.54□□□□□ -0.24
LMO3-206ENST00000424192 BACH2Q9BYV9 841 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms