RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	DAGLB	Q8NCG7	672 aa		11.44	□□□□□ -0.58
POLR1A-204	ENST00000424089	HOOK2	Q96ED9	719 aa		11.44	□□□□□ -0.58
POLR1A-204	ENST00000424089	TMEM47	Q9BQJ4	181 aa		11.44	□□□□□ -0.58
POLR1A-204	ENST00000424089	SPZ1	Q9BXG8	430 aa		11.44	□□□□□ -0.58
POLR1A-204	ENST00000424089	TDRD3	Q9H7E2	651 aa	Known RBP	11.44	□□□□□ -0.58
POLR1A-204	ENST00000424089	TTF2	Q9UNY4	1162 aa	Known RBP	11.44	□□□□□ -0.58
POLR1A-204	ENST00000424089	NR2E3	Q9Y5X4	410 aa		11.44	□□□□□ -0.58
POLR1A-204	ENST00000424089	CUL9	Q8IWT3	2517 aa		11.44	□□□□□ -0.58
POLR1A-204	ENST00000424089	COL6A3	P12111	3177 aa		11.43	□□□□□ -0.58
POLR1A-204	ENST00000424089	TCP10L2	B9ZVM9	353 aa		11.43	□□□□□ -0.58
POLR1A-204	ENST00000424089	HLA-DOA	P06340	250 aa		11.43	□□□□□ -0.58
POLR1A-204	ENST00000424089	GABPA	Q06546	454 aa		11.43	□□□□□ -0.58
POLR1A-204	ENST00000424089	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.43	□□□□□ -0.58
POLR1A-204	ENST00000424089	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
POLR1A-204	ENST00000424089	OXER1	Q8TDS5	423 aa		11.43	□□□□□ -0.58
POLR1A-204	ENST00000424089	MRFAP1L1	Q96HT8	127 aa		11.43	□□□□□ -0.58
POLR1A-204	ENST00000424089	CCDC17	Q96LX7	622 aa		11.43	□□□□□ -0.58
POLR1A-204	ENST00000424089	ZDHHC15	Q96MV8	337 aa		11.43	□□□□□ -0.58
POLR1A-204	ENST00000424089	EHD4	Q9H223	541 aa		11.43	□□□□□ -0.58
POLR1A-204	ENST00000424089	DHX36	Q9H2U1	1008 aa	Known RBP	11.43	□□□□□ -0.58
POLR1A-204	ENST00000424089	USP40	Q9NVE5	1235 aa		11.43	□□□□□ -0.58
POLR1A-204	ENST00000424089	TMOD2	Q9NZR1	351 aa		11.43	□□□□□ -0.58
POLR1A-204	ENST00000424089	SAP30BP	Q9UHR5	308 aa	Known RBP	11.43	□□□□□ -0.58
POLR1A-204	ENST00000424089	MAD2L2	Q9UI95	211 aa		11.43	□□□□□ -0.58
POLR1A-204	ENST00000424089	PCDHA4	Q9UN74	947 aa		11.43	□□□□□ -0.58
POLR1A-204	ENST00000424089	ZSWIM8	A7E2V4	1837 aa		11.43	□□□□□ -0.58
POLR1A-204	ENST00000424089	SPDYE5	A6NIY4	337 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	IKBKB	O14920	756 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	PARP1	P09874	1014 aa	Known RBP	11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	ZNF75D	P51815	510 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	PLCB2	Q00722	1185 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	EVX2	Q03828	476 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	SNAPC2	Q13487	334 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	NPY5R	Q15761	445 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	TTC38	Q5R3I4	469 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	PLA2G4D	Q86XP0	818 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	ERO1B	Q86YB8	467 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	BLID	Q8IZY5	108 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	TRIML1	Q8N9V2	468 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	CNNM3	Q8NE01	707 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	RAET1E	Q8TD07	263 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	CNKSR2	Q8WXI2	1034 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	TEPSIN	Q96N21	525 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	TRIM5	Q9C035	493 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	ARHGAP39	Q9C0H5	1083 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	TMEM39B	Q9GZU3	492 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	RTN4	Q9NQC3	1192 aa	Known RBP	11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	SERPINB13	Q9UIV8	391 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	STX8	Q9UNK0	236 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	PCDHB6	Q9Y5E3	794 aa		11.42	□□□□□ -0.58
POLR1A-204	ENST00000424089	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	BTBD19	C9JJ37	291 aa		11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	LAD1	O00515	517 aa		11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	GNA11	P29992	359 aa		11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	CRK	P46108	304 aa		11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	UBXN2A	P68543	259 aa		11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	ORC2	Q13416	577 aa	Predicted RBP	11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	ASPRV1	Q53RT3	343 aa		11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	RRP36	Q96EU6	259 aa	Known RBP	11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	LRCH3	Q96II8	777 aa		11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	TRIM47	Q96LD4	638 aa		11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	CLIC6	Q96NY7	704 aa		11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	WRNIP1	Q96S55	665 aa		11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	IDI2	Q9BXS1	227 aa		11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	BARHL2	Q9NY43	387 aa		11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	MTMR4	Q9NYA4	1195 aa		11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	BIN2	Q9UBW5	565 aa	Predicted RBP	11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	DACH1	Q9UI36	760 aa		11.41	□□□□□ -0.58
POLR1A-204	ENST00000424089	IGKV6D-41	A0A0C4DH26	115 aa		11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	KLRF2	D3W0D1	207 aa		11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	SOX1	O00570	391 aa	Predicted RBP	11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	NEMF	O60524	1076 aa		11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	GRK4	P32298	578 aa		11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	PSMC4	P43686	418 aa		11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	ATP2C1	P98194	919 aa	Predicted RBP	11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	MDM2	Q00987	491 aa	Predicted RBP	11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	PPIL2	Q13356	520 aa		11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	NT5DC1	Q5TFE4	455 aa		11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	DCAF15	Q66K64	600 aa		11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	CDC42EP5	Q6NZY7	148 aa		11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	C11orf57	Q6ZUT1	292 aa	Predicted RBP	11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	DHX40	Q8IX18	779 aa	Known RBP	11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	SLC44A5	Q8NCS7	719 aa		11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	SHISA4	Q96DD7	197 aa		11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	SEC63	Q9UGP8	760 aa	Known RBP	11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	SRRD	Q9UH36	339 aa		11.4	□□□□□ -0.58
POLR1A-204	ENST00000424089	NAV1	Q8NEY1	1877 aa		11.4	□□□□□ -0.59
POLR1A-204	ENST00000424089	CCDC194	A0A1B0GVG4	234 aa		11.39	□□□□□ -0.59
POLR1A-204	ENST00000424089	ESYT2	A0FGR8	921 aa		11.39	□□□□□ -0.59
POLR1A-204	ENST00000424089		M0R2N6	131 aa		11.39	□□□□□ -0.59
POLR1A-204	ENST00000424089	AP5Z1	O43299	807 aa		11.39	□□□□□ -0.59
POLR1A-204	ENST00000424089	OFD1	O75665	1012 aa		11.39	□□□□□ -0.59
POLR1A-204	ENST00000424089	SMC2	O95347	1197 aa		11.39	□□□□□ -0.59
POLR1A-204	ENST00000424089	TTLL1	O95922	423 aa		11.39	□□□□□ -0.59
POLR1A-204	ENST00000424089	GJB1	P08034	283 aa		11.39	□□□□□ -0.59
POLR1A-204	ENST00000424089	SNHG28	P0DPA3	235 aa		11.39	□□□□□ -0.59

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