RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 BICD2Q8TD16 824 aa18.33■□□□□ 0.52
ABCA1-203ENST00000423487 ZNF214Q9UL59 606 aaPredicted RBP18.33■□□□□ 0.52
ABCA1-203ENST00000423487 RABGAP1Q9Y3P9 1069 aa18.33■□□□□ 0.52
ABCA1-203ENST00000423487 IGF2BP3O00425 579 aaKnown RBP eCLIP18.32■□□□□ 0.52
ABCA1-203ENST00000423487 F13A1P00488 732 aa18.32■□□□□ 0.52
ABCA1-203ENST00000423487 TM4SF4P48230 202 aa18.32■□□□□ 0.52
ABCA1-203ENST00000423487 GCLCP48506 637 aaPredicted RBP18.32■□□□□ 0.52
ABCA1-203ENST00000423487 ADCY7P51828 1080 aa18.32■□□□□ 0.52
ABCA1-203ENST00000423487 MRPL12P52815 198 aaKnown RBP18.32■□□□□ 0.52
ABCA1-203ENST00000423487 TKFCQ3LXA3 575 aa18.32■□□□□ 0.52
ABCA1-203ENST00000423487 SNRNP48Q6IEG0 339 aaKnown RBP18.32■□□□□ 0.52
ABCA1-203ENST00000423487 IFNL1Q8IU54 200 aa18.32■□□□□ 0.52
ABCA1-203ENST00000423487 TEX2Q8IWB9 1127 aa18.32■□□□□ 0.52
ABCA1-203ENST00000423487 BLIDQ8IZY5 108 aa18.32■□□□□ 0.52
ABCA1-203ENST00000423487 CUL5Q93034 780 aa18.32■□□□□ 0.52
ABCA1-203ENST00000423487 ZSCAN16Q9H4T2 348 aaPredicted RBP18.32■□□□□ 0.52
ABCA1-203ENST00000423487 PSTPIP2Q9H939 334 aa18.32■□□□□ 0.52
ABCA1-203ENST00000423487 RIC8AQ9NPQ8 531 aa18.32■□□□□ 0.52
ABCA1-203ENST00000423487 ZDHHC9Q9Y397 364 aa18.32■□□□□ 0.52
ABCA1-203ENST00000423487 PARP14Q460N5 1801 aa18.32■□□□□ 0.52
ABCA1-203ENST00000423487 ALAS1P13196 640 aa18.31■□□□□ 0.52
ABCA1-203ENST00000423487 PLS1Q14651 629 aa18.31■□□□□ 0.52
ABCA1-203ENST00000423487 NPY5RQ15761 445 aa18.31■□□□□ 0.52
ABCA1-203ENST00000423487 FOXD4L5Q5VV16 416 aaPredicted RBP18.31■□□□□ 0.52
ABCA1-203ENST00000423487 FERMT3Q86UX7 667 aa18.31■□□□□ 0.52
ABCA1-203ENST00000423487 FOXD4L4Q8WXT5 416 aaPredicted RBP18.31■□□□□ 0.52
ABCA1-203ENST00000423487 PAGR1Q9BTK6 254 aa18.31■□□□□ 0.52
ABCA1-203ENST00000423487 FOXP1Q9H334 677 aaPredicted RBP18.31■□□□□ 0.52
ABCA1-203ENST00000423487 BTBD7Q9P203 1132 aa18.31■□□□□ 0.52
ABCA1-203ENST00000423487 BTBD18B2RXH4 712 aa18.3■□□□□ 0.52
ABCA1-203ENST00000423487 POTEEQ6S8J3 1075 aa18.3■□□□□ 0.52
ABCA1-203ENST00000423487 ZIC5Q96T25 663 aa18.3■□□□□ 0.52
ABCA1-203ENST00000423487 SPATC1LQ9H0A9 340 aa18.3■□□□□ 0.52
ABCA1-203ENST00000423487 RBPJLQ9UBG7 517 aa18.3■□□□□ 0.52
ABCA1-203ENST00000423487 CNMDO75829 334 aa18.29■□□□□ 0.52
ABCA1-203ENST00000423487 TAL1P17542 331 aaPredicted RBP18.29■□□□□ 0.52
ABCA1-203ENST00000423487 U2AF2P26368 475 aaKnown RBP eCLIP18.29■□□□□ 0.52
ABCA1-203ENST00000423487 COPB2P35606 906 aa18.29■□□□□ 0.52
ABCA1-203ENST00000423487 TAF1CQ15572 869 aaPredicted RBP18.29■□□□□ 0.52
ABCA1-203ENST00000423487 BRAPQ7Z569 592 aa18.29■□□□□ 0.52
ABCA1-203ENST00000423487 MCF2L2Q86YR7 1114 aa18.29■□□□□ 0.52
ABCA1-203ENST00000423487 RIOX2Q8IUF8 465 aa18.29■□□□□ 0.52
ABCA1-203ENST00000423487 REXO1Q8N1G1 1221 aaKnown RBP18.29■□□□□ 0.52
ABCA1-203ENST00000423487 TRERF1Q96PN7 1200 aa18.29■□□□□ 0.52
ABCA1-203ENST00000423487 RNF146Q9NTX7 359 aa18.29■□□□□ 0.52
ABCA1-203ENST00000423487 ATP6V1DQ9Y5K8 247 aa18.29■□□□□ 0.52
ABCA1-203ENST00000423487 A0A0G2JMZ2 1700 aa18.29■□□□□ 0.52
ABCA1-203ENST00000423487 AOC2O75106 756 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 SLC25A27O95847 323 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 ALDH1A1P00352 501 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 RESTQ13127 1097 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 SAMD3Q8N6K7 520 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 CHST13Q8NET6 341 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 OXER1Q8TDS5 423 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 TXNRD2Q9NNW7 524 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 HOMER2Q9NSB8 354 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 KIF28PB7ZC32 967 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 MAP2K2P36507 400 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 ERVK-9P63128 1117 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 ERVK-24P63145 666 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 CCNA1P78396 465 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 NR5A1Q13285 461 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 MCTP2Q6DN12 878 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 NOSTRINQ8IVI9 506 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 GPRC5AQ8NFJ5 357 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 CLEC4DQ8WXI8 215 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 MAF1Q9H063 256 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 ACAD9Q9H845 621 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 ZFYVE28Q9HCC9 887 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 MORF4L1Q9UBU8 362 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 FBXO40Q9UH90 709 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 RIPK3Q9Y572 518 aa18.28■□□□□ 0.52
ABCA1-203ENST00000423487 GCOM1H8Y6P7 765 aaPredicted RBP18.27■□□□□ 0.51
ABCA1-203ENST00000423487 M0R2N6 131 aa18.27■□□□□ 0.51
ABCA1-203ENST00000423487 PIK3CDO00329 1044 aa18.27■□□□□ 0.51
ABCA1-203ENST00000423487 OPLAHO14841 1288 aa18.27■□□□□ 0.51
ABCA1-203ENST00000423487 POLR2MP0CAP2 368 aa18.27■□□□□ 0.51
ABCA1-203ENST00000423487 VEGFBP49765 207 aa18.27■□□□□ 0.51
ABCA1-203ENST00000423487 KRT25Q7Z3Z0 450 aa18.27■□□□□ 0.51
ABCA1-203ENST00000423487 MOV10L1Q9BXT6 1211 aaKnown RBP18.27■□□□□ 0.51
ABCA1-203ENST00000423487 MAP3K20Q9NYL2 800 aaKnown RBP18.27■□□□□ 0.51
ABCA1-203ENST00000423487 BIN2Q9UBW5 565 aaPredicted RBP18.27■□□□□ 0.51
ABCA1-203ENST00000423487 PCDHA6Q9UN73 950 aa18.27■□□□□ 0.51
ABCA1-203ENST00000423487 PCDHA8Q9Y5H6 950 aa18.27■□□□□ 0.51
ABCA1-203ENST00000423487 CCDC194A0A1B0GVG4 234 aa18.26■□□□□ 0.51
ABCA1-203ENST00000423487 NFIBO00712 420 aa18.26■□□□□ 0.51
ABCA1-203ENST00000423487 MEIS2O14770 477 aa18.26■□□□□ 0.51
ABCA1-203ENST00000423487 CFBP00751 764 aa18.26■□□□□ 0.51
ABCA1-203ENST00000423487 HTRA3P83110 453 aa18.26■□□□□ 0.51
ABCA1-203ENST00000423487 FAM110CQ1W6H9 321 aa18.26■□□□□ 0.51
ABCA1-203ENST00000423487 Q3C1V9 767 aa18.26■□□□□ 0.51
ABCA1-203ENST00000423487 MUM1L1Q5H9M0 696 aa18.26■□□□□ 0.51
ABCA1-203ENST00000423487 USP17L6PQ6QN14 398 aa18.26■□□□□ 0.51
ABCA1-203ENST00000423487 ANKRD13CQ8N6S4 541 aa18.26■□□□□ 0.51
ABCA1-203ENST00000423487 SHCBP1Q8NEM2 672 aa18.26■□□□□ 0.51
ABCA1-203ENST00000423487 TNFRSF25Q93038 417 aa18.26■□□□□ 0.51
ABCA1-203ENST00000423487 ADAMTS3O15072 1205 aa18.25■□□□□ 0.51
ABCA1-203ENST00000423487 PEX10O60683 326 aa18.25■□□□□ 0.51
ABCA1-203ENST00000423487 FOSP01100 380 aaPredicted RBP18.25■□□□□ 0.51
ABCA1-203ENST00000423487 HSPA6P17066 643 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms