RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 FAM109BQ6ICB4 259 aaPredicted RBP13.39□□□□□ -0.27
NDUFA3-208ENST00000422029 GPR153Q6NV75 609 aa13.39□□□□□ -0.27
NDUFA3-208ENST00000422029 ZNF467Q7Z7K2 595 aaPredicted RBP13.39□□□□□ -0.27
NDUFA3-208ENST00000422029 TBC1D10CQ8IV04 446 aa13.39□□□□□ -0.27
NDUFA3-208ENST00000422029 MSL3Q8N5Y2 521 aaKnown RBP13.39□□□□□ -0.27
NDUFA3-208ENST00000422029 MYLIPQ8WY64 445 aa13.39□□□□□ -0.27
NDUFA3-208ENST00000422029 GLT1D1Q96MS3 346 aa13.39□□□□□ -0.27
NDUFA3-208ENST00000422029 CDX2Q99626 313 aaPredicted RBP13.39□□□□□ -0.27
NDUFA3-208ENST00000422029 TSEN34Q9BSV6 310 aaKnown RBP13.39□□□□□ -0.27
NDUFA3-208ENST00000422029 TTYH1Q9H313 450 aaPredicted RBP13.39□□□□□ -0.27
NDUFA3-208ENST00000422029 ANAPC4Q9UJX5 808 aa13.39□□□□□ -0.27
NDUFA3-208ENST00000422029 GRXCR1A8MXD5 290 aa13.38□□□□□ -0.27
NDUFA3-208ENST00000422029 NFIBO00712 420 aa13.38□□□□□ -0.27
NDUFA3-208ENST00000422029 ORC4O43929 436 aa13.38□□□□□ -0.27
NDUFA3-208ENST00000422029 SMPD1P17405 629 aa13.38□□□□□ -0.27
NDUFA3-208ENST00000422029 CYP2C18P33260 490 aa13.38□□□□□ -0.27
NDUFA3-208ENST00000422029 ALX1Q15699 326 aa13.38□□□□□ -0.27
NDUFA3-208ENST00000422029 SYDE2Q5VT97 1194 aa13.38□□□□□ -0.27
NDUFA3-208ENST00000422029 NUP133Q8WUM0 1156 aa13.38□□□□□ -0.27
NDUFA3-208ENST00000422029 SEMA6BQ9H3T3 888 aa13.38□□□□□ -0.27
NDUFA3-208ENST00000422029 SPC25Q9HBM1 224 aa13.38□□□□□ -0.27
NDUFA3-208ENST00000422029 CYP39A1Q9NYL5 469 aa13.38□□□□□ -0.27
NDUFA3-208ENST00000422029 DNAH12Q6ZR08 3092 aa13.38□□□□□ -0.27
NDUFA3-208ENST00000422029 PTPDC1A2A3K4 754 aa13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 MOXD2PA6NHM9 499 aa13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 TOP1P11387 765 aaKnown RBP13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 CSF2RAP15509 400 aa13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 SDSP20132 328 aa13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 CALML3P27482 149 aa13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 GJA9P57773 515 aa13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 CWC27Q6UX04 472 aaKnown RBP13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 SLC30A10Q6XR72 485 aa13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 KIAA1211Q6ZU35 1233 aa13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 ANKRD33Q7Z3H0 272 aa13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 TLK2Q86UE8 772 aa13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 PLEKHM2Q8IWE5 1019 aa13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 UBA5Q9GZZ9 404 aa13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 AP5M1Q9H0R1 490 aa13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 UPF3AQ9H1J1 476 aaKnown RBP13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 SYNPO2Q9UMS6 1093 aa13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 NEDD4P46934 1319 aa13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 UMODL1Q5DID0 1318 aa13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 CCDC171Q6TFL3 1326 aa13.37□□□□□ -0.27
NDUFA3-208ENST00000422029 TIMP1P01033 207 aa13.36□□□□□ -0.27
NDUFA3-208ENST00000422029 ICAM1P05362 532 aa13.36□□□□□ -0.27
NDUFA3-208ENST00000422029 CDK7P50613 346 aa13.36□□□□□ -0.27
NDUFA3-208ENST00000422029 CHMP4BP1P59074 171 aa13.36□□□□□ -0.27
NDUFA3-208ENST00000422029 IRX6P78412 446 aaPredicted RBP13.36□□□□□ -0.27
NDUFA3-208ENST00000422029 TAPT1Q6NXT6 567 aa13.36□□□□□ -0.27
NDUFA3-208ENST00000422029 MFSD6Q6ZSS7 791 aa13.36□□□□□ -0.27
NDUFA3-208ENST00000422029 C16orf59Q7L2K0 433 aa13.36□□□□□ -0.27
NDUFA3-208ENST00000422029 CHD1LQ86WJ1 897 aa13.36□□□□□ -0.27
NDUFA3-208ENST00000422029 PCSK9Q8NBP7 692 aaKnown RBP13.36□□□□□ -0.27
NDUFA3-208ENST00000422029 DCAF4Q8WV16 495 aa13.36□□□□□ -0.27
NDUFA3-208ENST00000422029 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.36□□□□□ -0.277e-6■□□□□ 9.4
NDUFA3-208ENST00000422029 TRPV6Q9H1D0 765 aa13.36□□□□□ -0.27
NDUFA3-208ENST00000422029 RWDD1Q9H446 243 aaPredicted RBP13.36□□□□□ -0.27
NDUFA3-208ENST00000422029 TBX21Q9UL17 535 aa13.36□□□□□ -0.27
NDUFA3-208ENST00000422029 LAMA3Q16787 3333 aa13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 A0A0U1RQG5 324 aaPredicted RBP13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 ASB14A6NK59 587 aa13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 ARVCFO00192 962 aa13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 FGRP09769 529 aa13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 FDX1P10109 184 aa13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 PDHBP11177 359 aa13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 CST5P28325 142 aaPredicted RBP13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 PBX2P40425 430 aa13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 CCL23P55773 120 aa13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 FSCN1Q16658 493 aaKnown RBP13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 TKFCQ3LXA3 575 aa13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 USH1GQ495M9 461 aa13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 AKNAD1Q5T1N1 836 aa13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 FAM126BQ8IXS8 530 aa13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 TBC1D5Q92609 795 aa13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 RANBP17Q9H2T7 1088 aaKnown RBP13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 GNEQ9Y223 722 aaKnown RBP13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 GRIN2DO15399 1336 aa13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 ELP1O95163 1332 aa13.35□□□□□ -0.27
NDUFA3-208ENST00000422029 PLA2G6O60733 806 aa13.34□□□□□ -0.27
NDUFA3-208ENST00000422029 ZNF543Q08ER8 600 aa13.34□□□□□ -0.27
NDUFA3-208ENST00000422029 ZNF365Q70YC5 407 aa13.34□□□□□ -0.27
NDUFA3-208ENST00000422029 SMC5Q8IY18 1101 aa13.34□□□□□ -0.27
NDUFA3-208ENST00000422029 CLEC4DQ8WXI8 215 aa13.34□□□□□ -0.27
NDUFA3-208ENST00000422029 COPS5Q92905 334 aa13.34□□□□□ -0.27
NDUFA3-208ENST00000422029 TOX2Q96NM4 488 aa13.34□□□□□ -0.27
NDUFA3-208ENST00000422029 VAT1LQ9HCJ6 419 aa13.34□□□□□ -0.27
NDUFA3-208ENST00000422029 B4E1Z4 1266 aa13.33□□□□□ -0.28
NDUFA3-208ENST00000422029 KDM4AO75164 1064 aa13.33□□□□□ -0.28
NDUFA3-208ENST00000422029 MYL3P08590 195 aa13.33□□□□□ -0.28
NDUFA3-208ENST00000422029 NOVP48745 357 aa13.33□□□□□ -0.28
NDUFA3-208ENST00000422029 SMAD3P84022 425 aaKnown RBP13.33□□□□□ -0.28
NDUFA3-208ENST00000422029 NUCB1Q02818 461 aa13.33□□□□□ -0.28
NDUFA3-208ENST00000422029 ITGA7Q13683 1181 aa13.33□□□□□ -0.28
NDUFA3-208ENST00000422029 GRIN2CQ14957 1233 aa13.33□□□□□ -0.28
NDUFA3-208ENST00000422029 PPP4R3BQ5MIZ7 849 aa13.33□□□□□ -0.28
NDUFA3-208ENST00000422029 TMEM240Q5SV17 173 aa13.33□□□□□ -0.28
NDUFA3-208ENST00000422029 MFSD5Q6N075 450 aa13.33□□□□□ -0.28
NDUFA3-208ENST00000422029 BTNL9Q6UXG8 535 aa13.33□□□□□ -0.28
NDUFA3-208ENST00000422029 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms