RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 SNAI1O95863 264 aaPredicted RBP30.77■■■□□ 2.52
CDK9-202ENST00000421939 USH1GQ495M9 461 aa30.77■■■□□ 2.52
CDK9-202ENST00000421939 ANO1Q5XXA6 986 aa30.77■■■□□ 2.52
CDK9-202ENST00000421939 CLEC4DQ8WXI8 215 aa30.77■■■□□ 2.52
CDK9-202ENST00000421939 JMJD4Q9H9V9 463 aa30.77■■■□□ 2.52
CDK9-202ENST00000421939 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.77■■■□□ 2.52
CDK9-202ENST00000421939 ZNF865P0CJ78 1059 aaPredicted RBP30.76■■■□□ 2.51
CDK9-202ENST00000421939 PRPF38BQ5VTL8 546 aaKnown RBP30.76■■■□□ 2.51
CDK9-202ENST00000421939 ARMCX2Q7L311 632 aa30.76■■■□□ 2.51
CDK9-202ENST00000421939 VAT1LQ9HCJ6 419 aa30.76■■■□□ 2.51
CDK9-202ENST00000421939 MCM3APO60318 1980 aa30.75■■■□□ 2.51
CDK9-202ENST00000421939 LCTP09848 1927 aa30.75■■■□□ 2.51
CDK9-202ENST00000421939 SOWAHBA6NEL2 793 aa30.75■■■□□ 2.51
CDK9-202ENST00000421939 QRICH1Q2TAL8 776 aa30.75■■■□□ 2.51
CDK9-202ENST00000421939 TSGA10IPQ3SY00 556 aa30.75■■■□□ 2.51
CDK9-202ENST00000421939 RASEFQ8IZ41 740 aa30.75■■■□□ 2.51
CDK9-202ENST00000421939 ZNF654Q8IZM8 581 aa30.75■■■□□ 2.51
CDK9-202ENST00000421939 C11orf49Q9H6J7 331 aa30.75■■■□□ 2.51
CDK9-202ENST00000421939 ZHX1Q9UKY1 873 aaPredicted RBP30.75■■■□□ 2.51
CDK9-202ENST00000421939 DDAH1O94760 285 aa30.74■■■□□ 2.51
CDK9-202ENST00000421939 REC8O95072 547 aa30.74■■■□□ 2.51
CDK9-202ENST00000421939 AKR1A1P14550 325 aa30.74■■■□□ 2.51
CDK9-202ENST00000421939 BAATQ14032 418 aaPredicted RBP30.74■■■□□ 2.51
CDK9-202ENST00000421939 CCDC144CPQ8IYA2 1237 aa30.74■■■□□ 2.51
CDK9-202ENST00000421939 NEK1Q96PY6 1258 aa30.74■■■□□ 2.51
CDK9-202ENST00000421939 ASTN1O14525 1302 aa30.73■■■□□ 2.51
CDK9-202ENST00000421939 ABCB11O95342 1321 aa30.73■■■□□ 2.51
CDK9-202ENST00000421939 PTPDC1A2A3K4 754 aa30.73■■■□□ 2.51
CDK9-202ENST00000421939 KRT32Q14532 448 aa30.73■■■□□ 2.51
CDK9-202ENST00000421939 SLC30A10Q6XR72 485 aa30.73■■■□□ 2.51
CDK9-202ENST00000421939 NFXL1Q6ZNB6 911 aa30.73■■■□□ 2.51
CDK9-202ENST00000421939 TMTC2Q8N394 836 aa30.73■■■□□ 2.51
CDK9-202ENST00000421939 NUP133Q8WUM0 1156 aa30.73■■■□□ 2.51
CDK9-202ENST00000421939 ABHD16BQ9H3Z7 469 aa30.73■■■□□ 2.51
CDK9-202ENST00000421939 MYH6P13533 1939 aa30.73■■■□□ 2.51
CDK9-202ENST00000421939 ASB14A6NK59 587 aa30.72■■■□□ 2.51
CDK9-202ENST00000421939 RARBP10826 455 aa30.72■■■□□ 2.51
CDK9-202ENST00000421939 LIFRP42702 1097 aa30.72■■■□□ 2.51
CDK9-202ENST00000421939 RNF207Q6ZRF8 634 aa30.72■■■□□ 2.51
CDK9-202ENST00000421939 FBXO11Q86XK2 927 aa30.72■■■□□ 2.51
CDK9-202ENST00000421939 DPF3Q92784 378 aa30.72■■■□□ 2.51
CDK9-202ENST00000421939 MTMR8Q96EF0 704 aa30.72■■■□□ 2.51
CDK9-202ENST00000421939 MAP3K14Q99558 947 aa30.72■■■□□ 2.51
CDK9-202ENST00000421939 LRRC2Q9BYS8 371 aa30.72■■■□□ 2.51
CDK9-202ENST00000421939 LRRC37A2A6NM11 1700 aa30.71■■■□□ 2.51
CDK9-202ENST00000421939 CCDC69A6NI79 296 aa30.71■■■□□ 2.51
CDK9-202ENST00000421939 DNM1LO00429 736 aa30.71■■■□□ 2.51
CDK9-202ENST00000421939 COL6A1P12109 1028 aa30.71■■■□□ 2.51
CDK9-202ENST00000421939 ACVR2BQ13705 512 aa30.71■■■□□ 2.51
CDK9-202ENST00000421939 SLC35G1Q2M3R5 365 aa30.71■■■□□ 2.51
CDK9-202ENST00000421939 PURBQ96QR8 312 aaKnown RBP30.71■■■□□ 2.51
CDK9-202ENST00000421939 MYL10Q9BUA6 226 aa30.71■■■□□ 2.51
CDK9-202ENST00000421939 CALML3P27482 149 aa30.7■■■□□ 2.51
CDK9-202ENST00000421939 RPS6P62753 249 aaKnown RBP30.7■■■□□ 2.51
CDK9-202ENST00000421939 ADCK5Q3MIX3 580 aa30.7■■■□□ 2.51
CDK9-202ENST00000421939 ARRDC4Q8NCT1 418 aa30.7■■■□□ 2.51
CDK9-202ENST00000421939 CTCFLQ8NI51 663 aaPredicted RBP30.7■■■□□ 2.51
CDK9-202ENST00000421939 KCNB2Q92953 911 aa30.7■■■□□ 2.51
CDK9-202ENST00000421939 XPNPEP3Q9NQH7 507 aa30.7■■■□□ 2.51
CDK9-202ENST00000421939 ADD3Q9UEY8 706 aaKnown RBP30.7■■■□□ 2.51
CDK9-202ENST00000421939 FAM184BQ9ULE4 1060 aa30.7■■■□□ 2.51
CDK9-202ENST00000421939 ZBTB5O15062 677 aa30.69■■■□□ 2.5
CDK9-202ENST00000421939 HSPA4P34932 840 aa30.69■■■□□ 2.5
CDK9-202ENST00000421939 RGS22Q8NE09 1264 aa30.69■■■□□ 2.5
CDK9-202ENST00000421939 AMNQ9BXJ7 453 aa30.69■■■□□ 2.5
CDK9-202ENST00000421939 KATNBL1Q9H079 304 aa30.69■■■□□ 2.5
CDK9-202ENST00000421939 RIOX1Q9H6W3 641 aa30.69■■■□□ 2.5
CDK9-202ENST00000421939 CEP290O15078 2479 aa30.69■■■□□ 2.5
CDK9-202ENST00000421939 KIF5BP33176 963 aa30.68■■■□□ 2.5
CDK9-202ENST00000421939 DHX32Q7L7V1 743 aaKnown RBP30.68■■■□□ 2.5
CDK9-202ENST00000421939 HOMER1Q86YM7 354 aa30.68■■■□□ 2.5
CDK9-202ENST00000421939 LENG1Q96BZ8 264 aaPredicted RBP30.68■■■□□ 2.5
CDK9-202ENST00000421939 MRPL11Q9Y3B7 192 aaKnown RBP30.68■■■□□ 2.5
CDK9-202ENST00000421939 ALPK3Q96L96 1907 aa30.68■■■□□ 2.5
CDK9-202ENST00000421939 KBTBD13C9JR72 458 aa30.67■■■□□ 2.5
CDK9-202ENST00000421939 CYTH3O43739 400 aa30.67■■■□□ 2.5
CDK9-202ENST00000421939 ALDH5A1P51649 535 aaPredicted RBP30.67■■■□□ 2.5
CDK9-202ENST00000421939 GJC2Q5T442 439 aaPredicted RBP30.67■■■□□ 2.5
CDK9-202ENST00000421939 SGMS1Q86VZ5 419 aa30.67■■■□□ 2.5
CDK9-202ENST00000421939 MAF1Q9H063 256 aa30.67■■■□□ 2.5
CDK9-202ENST00000421939 DDX49Q9Y6V7 483 aaKnown RBP30.67■■■□□ 2.5
CDK9-202ENST00000421939 LOC102724159A0A0B4J2E5 919 aa30.66■■■□□ 2.5
CDK9-202ENST00000421939 PPP1R11O60927 126 aaPredicted RBP30.66■■■□□ 2.5
CDK9-202ENST00000421939 MYCNP04198 464 aaPredicted RBP30.66■■■□□ 2.5
CDK9-202ENST00000421939 HMGB1P09429 215 aaKnown RBP30.66■■■□□ 2.5
CDK9-202ENST00000421939 EXOSC10Q01780 885 aaKnown RBP30.66■■■□□ 2.5
CDK9-202ENST00000421939 PWP2Q15269 919 aaKnown RBP30.66■■■□□ 2.5
CDK9-202ENST00000421939 LRRC41Q15345 812 aa30.66■■■□□ 2.5
CDK9-202ENST00000421939 CCDC144BQ3MJ40 725 aa30.66■■■□□ 2.5
CDK9-202ENST00000421939 MORC4Q8TE76 937 aa30.66■■■□□ 2.5
CDK9-202ENST00000421939 TCEANC2Q96MN5 208 aa30.66■■■□□ 2.5
CDK9-202ENST00000421939 SLC12A7Q9Y666 1083 aa30.66■■■□□ 2.5
CDK9-202ENST00000421939 PGK1P00558 417 aa30.65■■■□□ 2.5
CDK9-202ENST00000421939 CALM1P0DP23 149 aa30.65■■■□□ 2.5
CDK9-202ENST00000421939 CALM2P0DP24 149 aa30.65■■■□□ 2.5
CDK9-202ENST00000421939 CALM3P0DP25 149 aa30.65■■■□□ 2.5
CDK9-202ENST00000421939 MCF2L2Q86YR7 1114 aa30.65■■■□□ 2.5
CDK9-202ENST00000421939 PIGSQ96S52 555 aa30.65■■■□□ 2.5
CDK9-202ENST00000421939 SNX14Q9Y5W7 946 aa30.65■■■□□ 2.5
CDK9-202ENST00000421939 BAZ2BQ9UIF8 2168 aaKnown RBP30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms