RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 LRPPRCP42704 1394 aaKnown RBP7.46□□□□□ -1.21
SFXN1-202ENST00000421887 PTPN23Q9H3S7 1636 aa7.46□□□□□ -1.21
SFXN1-202ENST00000421887 CHRNEQ04844 493 aa7.46□□□□□ -1.22
SFXN1-202ENST00000421887 GAL3ST3Q96A11 431 aa7.46□□□□□ -1.22
SFXN1-202ENST00000421887 DACT3Q96B18 629 aaPredicted RBP7.46□□□□□ -1.22
SFXN1-202ENST00000421887 SRCIN1Q9C0H9 1055 aa7.46□□□□□ -1.22
SFXN1-202ENST00000421887 TJP2Q9UDY2 1190 aa7.46□□□□□ -1.22
SFXN1-202ENST00000421887 PGRP06401 933 aa7.45□□□□□ -1.22
SFXN1-202ENST00000421887 XPCQ01831 940 aaPredicted RBP7.45□□□□□ -1.22
SFXN1-202ENST00000421887 PLCB3Q01970 1234 aa7.45□□□□□ -1.22
SFXN1-202ENST00000421887 VPS72Q15906 364 aa7.45□□□□□ -1.22
SFXN1-202ENST00000421887 SYT8Q8NBV8 401 aa7.45□□□□□ -1.22
SFXN1-202ENST00000421887 KRTAP9-8Q9BYQ0 159 aa7.45□□□□□ -1.22
SFXN1-202ENST00000421887 OSBPL7Q9BZF2 842 aa7.45□□□□□ -1.22
SFXN1-202ENST00000421887 GPR62Q9BZJ7 368 aa7.45□□□□□ -1.22
SFXN1-202ENST00000421887 ADAM7Q9H2U9 754 aa7.45□□□□□ -1.22
SFXN1-202ENST00000421887 MBD1Q9UIS9 605 aaPredicted RBP7.45□□□□□ -1.22
SFXN1-202ENST00000421887 SLIT2O94813 1529 aa7.45□□□□□ -1.22
SFXN1-202ENST00000421887 METP08581 1390 aa7.45□□□□□ -1.22
SFXN1-202ENST00000421887 IQGAP3Q86VI3 1631 aa7.45□□□□□ -1.22
SFXN1-202ENST00000421887 NRXN3Q9Y4C0 1643 aa7.45□□□□□ -1.22
SFXN1-202ENST00000421887 NWD2Q9ULI1 1742 aa7.44□□□□□ -1.22
SFXN1-202ENST00000421887 SLC22A31A6NKX4 558 aa7.44□□□□□ -1.22
SFXN1-202ENST00000421887 DUSP4Q13115 394 aa7.44□□□□□ -1.22
SFXN1-202ENST00000421887 ENOX2Q16206 610 aaKnown RBP7.44□□□□□ -1.22
SFXN1-202ENST00000421887 NBPF8Q3BBV2 869 aa7.44□□□□□ -1.22
SFXN1-202ENST00000421887 MRPL41Q8IXM3 137 aaKnown RBP7.44□□□□□ -1.22
SFXN1-202ENST00000421887 TMEM87BQ96K49 555 aa7.44□□□□□ -1.22
SFXN1-202ENST00000421887 EBF1Q9UH73 591 aa7.44□□□□□ -1.22
SFXN1-202ENST00000421887 KCNH3Q9ULD8 1083 aa7.44□□□□□ -1.22
SFXN1-202ENST00000421887 E9PCH4 1651 aa7.44□□□□□ -1.22
SFXN1-202ENST00000421887 ADGRB2O60241 1585 aa7.43□□□□□ -1.22
SFXN1-202ENST00000421887 CHD4Q14839 1912 aa7.43□□□□□ -1.22
SFXN1-202ENST00000421887 USP32Q8NFA0 1604 aa7.43□□□□□ -1.22
SFXN1-202ENST00000421887 EPHB3P54753 998 aa7.43□□□□□ -1.22
SFXN1-202ENST00000421887 C1QTNF8P60827 252 aa7.43□□□□□ -1.22
SFXN1-202ENST00000421887 EZH2Q15910 746 aaKnown RBP7.43□□□□□ -1.22
SFXN1-202ENST00000421887 ANKS4BQ8N8V4 417 aa7.43□□□□□ -1.22
SFXN1-202ENST00000421887 DTWD2Q8NBA8 298 aa7.43□□□□□ -1.22
SFXN1-202ENST00000421887 SHISA4Q96DD7 197 aa7.43□□□□□ -1.22
SFXN1-202ENST00000421887 SPON1Q9HCB6 807 aa7.43□□□□□ -1.22
SFXN1-202ENST00000421887 CEP131Q9UPN4 1083 aa7.43□□□□□ -1.22
SFXN1-202ENST00000421887 PLCH1Q4KWH8 1693 aa7.43□□□□□ -1.22
SFXN1-202ENST00000421887 NINLQ9Y2I6 1382 aa7.43□□□□□ -1.22
SFXN1-202ENST00000421887 ANKRD50Q9ULJ7 1429 aa7.43□□□□□ -1.22
SFXN1-202ENST00000421887 INSRRP14616 1297 aa7.42□□□□□ -1.22
SFXN1-202ENST00000421887 LMNB1P20700 586 aa7.42□□□□□ -1.22
SFXN1-202ENST00000421887 PLP2Q04941 152 aa7.42□□□□□ -1.22
SFXN1-202ENST00000421887 SLC6A19Q695T7 634 aa7.42□□□□□ -1.22
SFXN1-202ENST00000421887 SP8Q8IXZ3 490 aa7.42□□□□□ -1.22
SFXN1-202ENST00000421887 DNAJB8Q8NHS0 232 aa7.42□□□□□ -1.22
SFXN1-202ENST00000421887 ADGRL2O95490 1459 aa7.42□□□□□ -1.22
SFXN1-202ENST00000421887 PXDNQ92626 1479 aa7.42□□□□□ -1.22
SFXN1-202ENST00000421887 PUM1Q14671 1186 aaKnown RBP eCLIP7.41□□□□□ -1.22
SFXN1-202ENST00000421887 SPATS1Q496A3 300 aa7.41□□□□□ -1.22
SFXN1-202ENST00000421887 TTBK2Q6IQ55 1244 aa7.41□□□□□ -1.22
SFXN1-202ENST00000421887 USTQ9Y2C2 406 aa7.41□□□□□ -1.22
SFXN1-202ENST00000421887 DISP2A7MBM2 1401 aa7.41□□□□□ -1.22
SFXN1-202ENST00000421887 CAMTA1Q9Y6Y1 1673 aa7.41□□□□□ -1.22
SFXN1-202ENST00000421887 TNS1Q9HBL0 1735 aaKnown RBP7.41□□□□□ -1.22
SFXN1-202ENST00000421887 GFRA2O00451 464 aa7.4□□□□□ -1.22
SFXN1-202ENST00000421887 N4BP3O15049 544 aa7.4□□□□□ -1.22
SFXN1-202ENST00000421887 KCNQ2O43526 872 aa7.4□□□□□ -1.22
SFXN1-202ENST00000421887 SEPT6Q14141 434 aa7.4□□□□□ -1.22
SFXN1-202ENST00000421887 DSC3Q14574 896 aa7.4□□□□□ -1.22
SFXN1-202ENST00000421887 TEPSINQ96N21 525 aa7.4□□□□□ -1.22
SFXN1-202ENST00000421887 BDH2Q9BUT1 245 aa7.4□□□□□ -1.22
SFXN1-202ENST00000421887 EPB41L4AQ9HCS5 686 aaPredicted RBP7.4□□□□□ -1.22
SFXN1-202ENST00000421887 PARD3Q8TEW0 1356 aa7.4□□□□□ -1.22
SFXN1-202ENST00000421887 HFM1A2PYH4 1435 aa7.39□□□□□ -1.23
SFXN1-202ENST00000421887 SPATA31A3Q5VYP0 1347 aa7.39□□□□□ -1.23
SFXN1-202ENST00000421887 LRRN2O75325 713 aa7.39□□□□□ -1.23
SFXN1-202ENST00000421887 MAPK8P45983 427 aa7.39□□□□□ -1.23
SFXN1-202ENST00000421887 CNKSR3Q6P9H4 555 aa7.39□□□□□ -1.23
SFXN1-202ENST00000421887 ANKRD24Q8TF21 1146 aa7.39□□□□□ -1.23
SFXN1-202ENST00000421887 CCDC144AA2RUR9 1427 aa7.38□□□□□ -1.23
SFXN1-202ENST00000421887 ROBO2Q9HCK4 1378 aa7.38□□□□□ -1.23
SFXN1-202ENST00000421887 SDHBP21912 280 aa7.38□□□□□ -1.23
SFXN1-202ENST00000421887 VIPR1P32241 457 aa7.38□□□□□ -1.23
SFXN1-202ENST00000421887 TEKQ02763 1124 aa7.38□□□□□ -1.23
SFXN1-202ENST00000421887 FAM196AQ6ZSG2 479 aa7.38□□□□□ -1.23
SFXN1-202ENST00000421887 MCATQ8IVS2 390 aaKnown RBP7.38□□□□□ -1.23
SFXN1-202ENST00000421887 CAMKK2Q96RR4 588 aa7.38□□□□□ -1.23
SFXN1-202ENST00000421887 SETDB2Q96T68 719 aa7.38□□□□□ -1.23
SFXN1-202ENST00000421887 CNTD2Q9H8S5 307 aa7.38□□□□□ -1.23
SFXN1-202ENST00000421887 BIN2Q9UBW5 565 aaPredicted RBP7.38□□□□□ -1.23
SFXN1-202ENST00000421887 DCTN4Q9UJW0 460 aa7.38□□□□□ -1.23
SFXN1-202ENST00000421887 TTF2Q9UNY4 1162 aaKnown RBP7.38□□□□□ -1.23
SFXN1-202ENST00000421887 PCDHB5Q9Y5E4 795 aa7.38□□□□□ -1.23
SFXN1-202ENST00000421887 KIF1BO60333 1816 aa7.38□□□□□ -1.23
SFXN1-202ENST00000421887 KIF1AQ12756 1690 aa7.38□□□□□ -1.23
SFXN1-202ENST00000421887 CDC42BPGQ6DT37 1551 aa7.37□□□□□ -1.23
SFXN1-202ENST00000421887 VPS8Q8N3P4 1428 aa7.37□□□□□ -1.23
SFXN1-202ENST00000421887 ZC3H12DA2A288 527 aaKnown RBP7.37□□□□□ -1.23
SFXN1-202ENST00000421887 TREHO43280 583 aa7.37□□□□□ -1.23
SFXN1-202ENST00000421887 PDE4BQ07343 736 aa7.37□□□□□ -1.23
SFXN1-202ENST00000421887 SV2BQ7L1I2 683 aa7.37□□□□□ -1.23
SFXN1-202ENST00000421887 KRT28Q7Z3Y7 464 aa7.37□□□□□ -1.23
SFXN1-202ENST00000421887 NLRX1Q86UT6 975 aa7.37□□□□□ -1.23
SFXN1-202ENST00000421887 LINC01599Q8WXQ3 324 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms