RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 CMTR1Q8N1G2 835 aaKnown RBP18.28■□□□□ 0.52
BRAT1-202ENST00000421712 RRP36Q96EU6 259 aaKnown RBP18.28■□□□□ 0.52
BRAT1-202ENST00000421712 ZNF333Q96JL9 665 aa18.28■□□□□ 0.52
BRAT1-202ENST00000421712 PIGSQ96S52 555 aa18.28■□□□□ 0.52
BRAT1-202ENST00000421712 TMEM106CQ9BVX2 250 aa18.28■□□□□ 0.52
BRAT1-202ENST00000421712 AMNQ9BXJ7 453 aa18.28■□□□□ 0.52
BRAT1-202ENST00000421712 RIOX1Q9H6W3 641 aa18.28■□□□□ 0.52
BRAT1-202ENST00000421712 SMCHD1A6NHR9 2005 aa18.27■□□□□ 0.52
BRAT1-202ENST00000421712 PTPDC1A2A3K4 754 aa18.27■□□□□ 0.52
BRAT1-202ENST00000421712 CYTH3O43739 400 aa18.27■□□□□ 0.52
BRAT1-202ENST00000421712 METAP2P50579 478 aaKnown RBP eCLIP18.27■□□□□ 0.52
BRAT1-202ENST00000421712 FBXL16Q8N461 479 aa18.27■□□□□ 0.52
BRAT1-202ENST00000421712 SRBD1Q8N5C6 995 aaKnown RBP18.27■□□□□ 0.52
BRAT1-202ENST00000421712 LARP6Q9BRS8 491 aaKnown RBP18.27■□□□□ 0.52
BRAT1-202ENST00000421712 C22orf23Q9BZE7 217 aa18.27■□□□□ 0.52
BRAT1-202ENST00000421712 A1CFQ9NQ94 594 aaKnown RBP18.27■□□□□ 0.52
BRAT1-202ENST00000421712 FLRT1Q9NZU1 646 aa18.27■□□□□ 0.52
BRAT1-202ENST00000421712 SEC63Q9UGP8 760 aaKnown RBP18.27■□□□□ 0.52
BRAT1-202ENST00000421712 MRPL11Q9Y3B7 192 aaKnown RBP18.27■□□□□ 0.52
BRAT1-202ENST00000421712 MYH6P13533 1939 aa18.27■□□□□ 0.51
BRAT1-202ENST00000421712 PFASO15067 1338 aa18.26■□□□□ 0.51
BRAT1-202ENST00000421712 ABCB11O95342 1321 aa18.26■□□□□ 0.51
BRAT1-202ENST00000421712 PNMA6FA0A0J9YX94 578 aa18.26■□□□□ 0.51
BRAT1-202ENST00000421712 POTEB2H3BUK9 544 aa18.26■□□□□ 0.51
BRAT1-202ENST00000421712 NFIBO00712 420 aa18.26■□□□□ 0.51
BRAT1-202ENST00000421712 SMARCA1P28370 1054 aa18.26■□□□□ 0.51
BRAT1-202ENST00000421712 TRIM32Q13049 653 aa18.26■□□□□ 0.51
BRAT1-202ENST00000421712 TRAF1Q13077 416 aa18.26■□□□□ 0.51
BRAT1-202ENST00000421712 MTFR1Q15390 333 aa18.26■□□□□ 0.51
BRAT1-202ENST00000421712 TMTC3Q6ZXV5 915 aa18.26■□□□□ 0.51
BRAT1-202ENST00000421712 MTMR8Q96EF0 704 aa18.26■□□□□ 0.51
BRAT1-202ENST00000421712 MAML3Q96JK9 1138 aa18.26■□□□□ 0.51
BRAT1-202ENST00000421712 SPZ1Q9BXG8 430 aa18.26■□□□□ 0.51
BRAT1-202ENST00000421712 RNF208Q9H0X6 261 aa18.26■□□□□ 0.51
BRAT1-202ENST00000421712 CCDC196A0A1B0GTZ2 297 aa18.25■□□□□ 0.51
BRAT1-202ENST00000421712 CCL5P13501 91 aa18.25■□□□□ 0.51
BRAT1-202ENST00000421712 PRKAR2AP13861 404 aaKnown RBP18.25■□□□□ 0.51
BRAT1-202ENST00000421712 CYP2C19P33261 490 aa18.25■□□□□ 0.51
BRAT1-202ENST00000421712 BAATQ14032 418 aaPredicted RBP18.25■□□□□ 0.51
BRAT1-202ENST00000421712 TOB2Q14106 344 aaPredicted RBP18.25■□□□□ 0.51
BRAT1-202ENST00000421712 SLC35G1Q2M3R5 365 aa18.25■□□□□ 0.51
BRAT1-202ENST00000421712 ZNF792Q3KQV3 632 aa18.25■□□□□ 0.51
BRAT1-202ENST00000421712 RNF207Q6ZRF8 634 aa18.25■□□□□ 0.51
BRAT1-202ENST00000421712 CLEC4DQ8WXI8 215 aa18.25■□□□□ 0.51
BRAT1-202ENST00000421712 AGXT2Q9BYV1 514 aa18.25■□□□□ 0.51
BRAT1-202ENST00000421712 HMX1Q9NP08 348 aaPredicted RBP18.25■□□□□ 0.51
BRAT1-202ENST00000421712 DIS3Q9Y2L1 958 aaKnown RBP18.25■□□□□ 0.51
BRAT1-202ENST00000421712 PCDHA1Q9Y5I3 950 aa18.25■□□□□ 0.51
BRAT1-202ENST00000421712 CALML3P27482 149 aa18.24■□□□□ 0.51
BRAT1-202ENST00000421712 NEK4P51957 841 aa18.24■□□□□ 0.51
BRAT1-202ENST00000421712 SOX10P56693 466 aa18.24■□□□□ 0.51
BRAT1-202ENST00000421712 CCT2P78371 535 aaKnown RBP18.24■□□□□ 0.51
BRAT1-202ENST00000421712 PPP2R5BQ15173 497 aa18.24■□□□□ 0.51
BRAT1-202ENST00000421712 OLFML2BQ68BL8 750 aa18.24■□□□□ 0.51
BRAT1-202ENST00000421712 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.24■□□□□ 0.51
BRAT1-202ENST00000421712 MCF2L2Q86YR7 1114 aa18.24■□□□□ 0.51
BRAT1-202ENST00000421712 UNC93B1Q9H1C4 597 aa18.24■□□□□ 0.51
BRAT1-202ENST00000421712 CYP39A1Q9NYL5 469 aa18.24■□□□□ 0.51
BRAT1-202ENST00000421712 DNAJC25-GNG10A0A024R161 153 aa18.23■□□□□ 0.51
BRAT1-202ENST00000421712 hCG_1642624A0A1W2PR95 340 aa18.23■□□□□ 0.51
BRAT1-202ENST00000421712 CNGA1P29973 690 aa18.23■□□□□ 0.51
BRAT1-202ENST00000421712 PDIA3P30101 505 aaKnown RBP18.23■□□□□ 0.51
BRAT1-202ENST00000421712 CDC27P30260 824 aa18.23■□□□□ 0.51
BRAT1-202ENST00000421712 ADD1P35611 737 aaKnown RBP18.23■□□□□ 0.51
BRAT1-202ENST00000421712 RCAN1P53805 252 aa18.23■□□□□ 0.51
BRAT1-202ENST00000421712 CNTN2Q02246 1040 aa18.23■□□□□ 0.51
BRAT1-202ENST00000421712 CACNB2Q08289 660 aaPredicted RBP18.23■□□□□ 0.51
BRAT1-202ENST00000421712 STK3Q13188 491 aa18.23■□□□□ 0.51
BRAT1-202ENST00000421712 ANKRD1Q15327 319 aa18.23■□□□□ 0.51
BRAT1-202ENST00000421712 ZNF236Q9UL36 1845 aa18.23■□□□□ 0.51
BRAT1-202ENST00000421712 CENPFP49454 3210 aa18.23■□□□□ 0.51
BRAT1-202ENST00000421712 HTTP42858 3142 aa18.23■□□□□ 0.51
BRAT1-202ENST00000421712 RPTORQ8N122 1335 aa18.23■□□□□ 0.51
BRAT1-202ENST00000421712 PPP1R11O60927 126 aaPredicted RBP18.22■□□□□ 0.51
BRAT1-202ENST00000421712 RPS6P62753 249 aaKnown RBP18.22■□□□□ 0.51
BRAT1-202ENST00000421712 NOL8Q76FK4 1167 aaKnown RBP18.22■□□□□ 0.51
BRAT1-202ENST00000421712 TINF2Q9BSI4 451 aa18.22■□□□□ 0.51
BRAT1-202ENST00000421712 PLXNA1Q9UIW2 1896 aa18.21■□□□□ 0.51
BRAT1-202ENST00000421712 CFBP00751 764 aa18.21■□□□□ 0.51
BRAT1-202ENST00000421712 AKAP17AQ02040 695 aaKnown RBP18.21■□□□□ 0.51
BRAT1-202ENST00000421712 PRAMEF19Q5SWL8 479 aa18.21■□□□□ 0.51
BRAT1-202ENST00000421712 SLC30A10Q6XR72 485 aa18.21■□□□□ 0.51
BRAT1-202ENST00000421712 FAM133AQ8N9E0 248 aa18.21■□□□□ 0.51
BRAT1-202ENST00000421712 IL17RAQ96F46 866 aa18.21■□□□□ 0.51
BRAT1-202ENST00000421712 ZNF274Q96GC6 653 aaPredicted RBP18.21■□□□□ 0.51
BRAT1-202ENST00000421712 PURBQ96QR8 312 aaKnown RBP18.21■□□□□ 0.51
BRAT1-202ENST00000421712 FAM217BQ9NTX9 383 aaPredicted RBP18.21■□□□□ 0.51
BRAT1-202ENST00000421712 CNPY2Q9Y2B0 182 aa18.21■□□□□ 0.51
BRAT1-202ENST00000421712 V9GY48 417 aaPredicted RBP18.21■□□□□ 0.51
BRAT1-202ENST00000421712 SOWAHBA6NEL2 793 aa18.2■□□□□ 0.5
BRAT1-202ENST00000421712 CPLX1O14810 134 aa18.2■□□□□ 0.5
BRAT1-202ENST00000421712 CCND3P30281 292 aaPredicted RBP18.2■□□□□ 0.5
BRAT1-202ENST00000421712 AK2P54819 239 aa18.2■□□□□ 0.5
BRAT1-202ENST00000421712 EVCP57679 992 aa18.2■□□□□ 0.5
BRAT1-202ENST00000421712 HEATR3Q7Z4Q2 680 aa18.2■□□□□ 0.5
BRAT1-202ENST00000421712 ZNF467Q7Z7K2 595 aaPredicted RBP18.2■□□□□ 0.5
BRAT1-202ENST00000421712 MSL3Q8N5Y2 521 aaKnown RBP18.2■□□□□ 0.5
BRAT1-202ENST00000421712 RGS22Q8NE09 1264 aa18.2■□□□□ 0.5
BRAT1-202ENST00000421712 TBC1D5Q92609 795 aa18.2■□□□□ 0.5
BRAT1-202ENST00000421712 DEFB118Q96PH6 123 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms