RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 TMEM63BQ5T3F8 832 aa11.13□□□□□ -0.63
SCRN1-204ENST00000421434 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.13□□□□□ -0.63
SCRN1-204ENST00000421434 FAM160B2Q86V87 743 aa11.13□□□□□ -0.63
SCRN1-204ENST00000421434 PURBQ96QR8 312 aaKnown RBP11.13□□□□□ -0.63
SCRN1-204ENST00000421434 PBX4Q9BYU1 374 aa11.13□□□□□ -0.63
SCRN1-204ENST00000421434 AP5M1Q9H0R1 490 aa11.13□□□□□ -0.63
SCRN1-204ENST00000421434 PRDM6Q9NQX0 595 aa11.13□□□□□ -0.63
SCRN1-204ENST00000421434 PDGFCQ9NRA1 345 aa11.13□□□□□ -0.63
SCRN1-204ENST00000421434 SYNPO2Q9UMS6 1093 aa11.13□□□□□ -0.63
SCRN1-204ENST00000421434 ASTN1O14525 1302 aa11.12□□□□□ -0.63
SCRN1-204ENST00000421434 GREB1LQ9C091 1923 aaPredicted RBP11.12□□□□□ -0.63
SCRN1-204ENST00000421434 ASB14A6NK59 587 aa11.12□□□□□ -0.63
SCRN1-204ENST00000421434 TSPY2A6NKD2 308 aa11.12□□□□□ -0.63
SCRN1-204ENST00000421434 ERC2O15083 957 aa11.12□□□□□ -0.63
SCRN1-204ENST00000421434 CD4P01730 458 aa11.12□□□□□ -0.63
SCRN1-204ENST00000421434 FDX1P10109 184 aa11.12□□□□□ -0.63
SCRN1-204ENST00000421434 SMPD1P17405 629 aa11.12□□□□□ -0.63
SCRN1-204ENST00000421434 CCL23P55773 120 aa11.12□□□□□ -0.63
SCRN1-204ENST00000421434 ZMYM1Q5SVZ6 1142 aa11.12□□□□□ -0.63
SCRN1-204ENST00000421434 RCSD1Q6JBY9 416 aa11.12□□□□□ -0.63
SCRN1-204ENST00000421434 RASGRP2Q7LDG7 609 aa11.12□□□□□ -0.63
SCRN1-204ENST00000421434 TLK2Q86UE8 772 aa11.12□□□□□ -0.63
SCRN1-204ENST00000421434 PI4K2BQ8TCG2 481 aa11.12□□□□□ -0.63
SCRN1-204ENST00000421434 GMCL1Q96IK5 515 aa11.12□□□□□ -0.63
SCRN1-204ENST00000421434 TRPV6Q9H1D0 765 aa11.12□□□□□ -0.63
SCRN1-204ENST00000421434 PRDM12Q9H4Q4 367 aa11.12□□□□□ -0.63
SCRN1-204ENST00000421434 IL17RBQ9NRM6 502 aa11.12□□□□□ -0.63
SCRN1-204ENST00000421434 PRR12Q9ULL5 1215 aa11.12□□□□□ -0.63
SCRN1-204ENST00000421434 GRIN2DO15399 1336 aa11.11□□□□□ -0.63
SCRN1-204ENST00000421434 UMODL1Q5DID0 1318 aa11.11□□□□□ -0.63
SCRN1-204ENST00000421434 TTC41PQ6P2S7 1318 aa11.11□□□□□ -0.63
SCRN1-204ENST00000421434 MCM3APO60318 1980 aa11.11□□□□□ -0.63
SCRN1-204ENST00000421434 RANBP6O60518 1105 aaKnown RBP11.11□□□□□ -0.63
SCRN1-204ENST00000421434 FGBP02675 491 aa11.11□□□□□ -0.63
SCRN1-204ENST00000421434 SLC16A2P36021 539 aa11.11□□□□□ -0.63
SCRN1-204ENST00000421434 PSMC6P62333 389 aa11.11□□□□□ -0.63
SCRN1-204ENST00000421434 ITGA7Q13683 1181 aa11.11□□□□□ -0.63
SCRN1-204ENST00000421434 CCDC85BQ15834 202 aaPredicted RBP11.11□□□□□ -0.63
SCRN1-204ENST00000421434 FSCN1Q16658 493 aaKnown RBP11.11□□□□□ -0.63
SCRN1-204ENST00000421434 TKFCQ3LXA3 575 aa11.11□□□□□ -0.63
SCRN1-204ENST00000421434 RASIP1Q5U651 963 aa11.11□□□□□ -0.63
SCRN1-204ENST00000421434 TAPT1Q6NXT6 567 aa11.11□□□□□ -0.63
SCRN1-204ENST00000421434 NSMFQ6X4W1 530 aa11.11□□□□□ -0.63
SCRN1-204ENST00000421434 KIAA1211Q6ZU35 1233 aa11.11□□□□□ -0.63
SCRN1-204ENST00000421434 OTOP2Q7RTS6 562 aa11.11□□□□□ -0.63
SCRN1-204ENST00000421434 FBXO16Q8IX29 292 aaPredicted RBP11.11□□□□□ -0.63
SCRN1-204ENST00000421434 SYMPKQ92797 1274 aaKnown RBP11.11□□□□□ -0.63
SCRN1-204ENST00000421434 GAS2L1Q99501 681 aaPredicted RBP11.11□□□□□ -0.63
SCRN1-204ENST00000421434 HIPK3Q9H422 1215 aa11.11□□□□□ -0.63
SCRN1-204ENST00000421434 IL23AQ9NPF7 189 aa11.11□□□□□ -0.63
SCRN1-204ENST00000421434 CYP39A1Q9NYL5 469 aa11.11□□□□□ -0.63
SCRN1-204ENST00000421434 CXXC1Q9P0U4 656 aaPredicted RBP11.11□□□□□ -0.63
SCRN1-204ENST00000421434 GNEQ9Y223 722 aaKnown RBP11.11□□□□□ -0.63
SCRN1-204ENST00000421434 PCDHB15Q9Y5E8 787 aa11.11□□□□□ -0.63
SCRN1-204ENST00000421434 MYH4Q9Y623 1939 aa11.1□□□□□ -0.63
SCRN1-204ENST00000421434 CHD9Q3L8U1 2897 aa11.1□□□□□ -0.63
SCRN1-204ENST00000421434 ZEB2O60315 1214 aa11.1□□□□□ -0.63
SCRN1-204ENST00000421434 CABYRO75952 493 aa11.1□□□□□ -0.63
SCRN1-204ENST00000421434 IGFBP4P22692 258 aa11.1□□□□□ -0.63
SCRN1-204ENST00000421434 NKX3-2P78367 333 aa11.1□□□□□ -0.63
SCRN1-204ENST00000421434 CCDC96Q2M329 555 aa11.1□□□□□ -0.63
SCRN1-204ENST00000421434 VPS53Q5VIR6 699 aa11.1□□□□□ -0.63
SCRN1-204ENST00000421434 IQSEC1Q6DN90 963 aa11.1□□□□□ -0.63
SCRN1-204ENST00000421434 TTBK2Q6IQ55 1244 aa11.1□□□□□ -0.63
SCRN1-204ENST00000421434 PSRC1Q6PGN9 363 aaPredicted RBP11.1□□□□□ -0.63
SCRN1-204ENST00000421434 SLC43A3Q8NBI5 491 aa11.1□□□□□ -0.63
SCRN1-204ENST00000421434 TOMM22Q9NS69 142 aa11.1□□□□□ -0.63
SCRN1-204ENST00000421434 MSRAQ9UJ68 235 aa11.1□□□□□ -0.63
SCRN1-204ENST00000421434 CCPG1Q9ULG6 757 aa11.1□□□□□ -0.63
SCRN1-204ENST00000421434 PLIN4Q96Q06 1357 aa11.09□□□□□ -0.63
SCRN1-204ENST00000421434 FOXP2O15409 715 aa11.09□□□□□ -0.63
SCRN1-204ENST00000421434 B4GALT4O60513 344 aa11.09□□□□□ -0.63
SCRN1-204ENST00000421434 PLA2G6O60733 806 aa11.09□□□□□ -0.63
SCRN1-204ENST00000421434 MX1P20591 662 aa11.09□□□□□ -0.63
SCRN1-204ENST00000421434 RABGGTBP53611 331 aa11.09□□□□□ -0.63
SCRN1-204ENST00000421434 BAATQ14032 418 aaPredicted RBP11.09□□□□□ -0.63
SCRN1-204ENST00000421434 ADGRE1Q14246 886 aa11.09□□□□□ -0.63
SCRN1-204ENST00000421434 TJAP1Q5JTD0 557 aa11.09□□□□□ -0.63
SCRN1-204ENST00000421434 RRP12Q5JTH9 1297 aaKnown RBP11.09□□□□□ -0.63
SCRN1-204ENST00000421434 PPP4R3BQ5MIZ7 849 aa11.09□□□□□ -0.63
SCRN1-204ENST00000421434 HERVK_113Q902F9 699 aa11.09□□□□□ -0.63
SCRN1-204ENST00000421434 NKX2-4Q9H2Z4 354 aa11.09□□□□□ -0.63
SCRN1-204ENST00000421434 GPCPD1Q9NPB8 672 aa11.09□□□□□ -0.63
SCRN1-204ENST00000421434 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.09□□□□□ -0.63
SCRN1-204ENST00000421434 FRMPD2Q68DX3 1309 aaPredicted RBP11.09□□□□□ -0.63
SCRN1-204ENST00000421434 ICAM1P05362 532 aa11.08□□□□□ -0.64
SCRN1-204ENST00000421434 ANKRD45Q5TZF3 282 aa11.08□□□□□ -0.64
SCRN1-204ENST00000421434 SCLYQ96I15 445 aa11.08□□□□□ -0.64
SCRN1-204ENST00000421434 NOC4LQ9BVI4 516 aaKnown RBP11.08□□□□□ -0.64
SCRN1-204ENST00000421434 MTIF3Q9H2K0 278 aaKnown RBP11.08□□□□□ -0.64
SCRN1-204ENST00000421434 SLC28A3Q9HAS3 691 aa11.08□□□□□ -0.64
SCRN1-204ENST00000421434 YBX2Q9Y2T7 364 aaKnown RBP11.08□□□□□ -0.64
SCRN1-204ENST00000421434 MUC3AQ02505 3323 aa11.07□□□□□ -0.64
SCRN1-204ENST00000421434 PTPDC1A2A3K4 754 aa11.07□□□□□ -0.64
SCRN1-204ENST00000421434 ZBBXA8MT70 800 aa11.07□□□□□ -0.64
SCRN1-204ENST00000421434 NFIBO00712 420 aa11.07□□□□□ -0.64
SCRN1-204ENST00000421434 MYL3P08590 195 aa11.07□□□□□ -0.64
SCRN1-204ENST00000421434 CYP2C9P11712 490 aa11.07□□□□□ -0.64
SCRN1-204ENST00000421434 MYOGP15173 224 aa11.07□□□□□ -0.64
SCRN1-204ENST00000421434 CALML3P27482 149 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms