RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 SMARCE1Q969G3 411 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 DHX58Q96C10 678 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 ZHX3Q9H4I2 956 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 PCDHA7Q9UN72 937 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 CMA1P23946 247 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 NASPP49321 788 aaPredicted RBP8.38□□□□□ -1.07
BDNF-209ENST00000420794 CHAMP1Q96JM3 812 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 TAF1DQ9H5J8 278 aaPredicted RBP8.38□□□□□ -1.07
BDNF-209ENST00000420794 LRWD1Q9UFC0 647 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 TACC3Q9Y6A5 838 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 ESYT2A0FGR8 921 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 MYCLP12524 364 aaPredicted RBP8.37□□□□□ -1.07
BDNF-209ENST00000420794 HSP90AA2PQ14568 343 aaPredicted RBP8.37□□□□□ -1.07
BDNF-209ENST00000420794 ARHGEF16Q5VV41 709 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 MAP1SQ66K74 1059 aaPredicted RBP8.37□□□□□ -1.07
BDNF-209ENST00000420794 HAUS3Q68CZ6 603 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 NCAPG2Q86XI2 1143 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 TMEM87AQ8NBN3 555 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 OXER1Q8TDS5 423 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 CDCA5Q96FF9 252 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 GLIS2Q9BZE0 524 aaPredicted RBP8.37□□□□□ -1.07
BDNF-209ENST00000420794 RIC8AQ9NPQ8 531 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 FBXO40Q9UH90 709 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 DDX25Q9UHL0 483 aaKnown RBP8.37□□□□□ -1.07
BDNF-209ENST00000420794 PLIN4Q96Q06 1357 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 MYH2Q9UKX2 1941 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 STXBP3O00186 592 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 SNAPC2Q13487 334 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 SLFN12Q8IYM2 578 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 ANO3Q9BYT9 981 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 ZMYND12Q9H0C1 365 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 USP25Q9UHP3 1055 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 SOCS7O14512 581 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 SLURP2P0DP57 97 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 ORC2Q13416 577 aaPredicted RBP8.37□□□□□ -1.07
BDNF-209ENST00000420794 UBE2SQ16763 222 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 NBPF11Q86T75 865 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 LDHDQ86WU2 507 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 RAVER2Q9HCJ3 691 aaKnown RBP8.37□□□□□ -1.07
BDNF-209ENST00000420794 ABT1Q9ULW3 272 aaKnown RBP8.37□□□□□ -1.07
BDNF-209ENST00000420794 PCDHA12Q9UN75 941 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 ARAP2Q8WZ64 1704 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 CHD4Q14839 1912 aa8.37□□□□□ -1.07
BDNF-209ENST00000420794 SMTNL1A8MU46 457 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 PES1O00541 588 aaKnown RBP8.36□□□□□ -1.07
BDNF-209ENST00000420794 ZNF202O95125 648 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 CELF2O95319 508 aaKnown RBP8.36□□□□□ -1.07
BDNF-209ENST00000420794 LONP1P36776 959 aaKnown RBP8.36□□□□□ -1.07
BDNF-209ENST00000420794 GNPTABQ3T906 1256 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 PRR16Q569H4 304 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 NLRX1Q86UT6 975 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 GBA2Q9HCG7 927 aaPredicted RBP8.36□□□□□ -1.07
BDNF-209ENST00000420794 RMND1Q9NWS8 449 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 PCDHB6Q9Y5E3 794 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 MYH13Q9UKX3 1938 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 KIF28PB7ZC32 967 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 UBE2Q2LH0YL09 131 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 PTPRAP18433 802 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 KCTD2Q14681 263 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 STX1AQ16623 288 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 ARL6IP4Q66PJ3 421 aaKnown RBP8.36□□□□□ -1.07
BDNF-209ENST00000420794 SNRNP48Q6IEG0 339 aaKnown RBP8.36□□□□□ -1.07
BDNF-209ENST00000420794 LRSAM1Q6UWE0 723 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 FTOQ9C0B1 505 aaKnown RBP eCLIP8.36□□□□□ -1.07
BDNF-209ENST00000420794 DNAJC18Q9H819 358 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 POLR2DO15514 142 aaKnown RBP8.36□□□□□ -1.07
BDNF-209ENST00000420794 EGFRP00533 1210 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 STAT3P40763 770 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 AFMP43652 599 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 PKN1Q16512 942 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 USP17L6PQ6QN14 398 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 KLRG1Q96E93 195 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 WDR18Q9BV38 432 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 SLC5A4Q9NY91 659 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 ADD3Q9UEY8 706 aaKnown RBP8.36□□□□□ -1.07
BDNF-209ENST00000420794 MYH7P12883 1935 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 ASTN2O75129 1339 aaPredicted RBP8.36□□□□□ -1.07
BDNF-209ENST00000420794 IGKV6D-41A0A0C4DH26 115 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 CXCL11O14625 94 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 KIF20AO95235 890 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 COPB2P35606 906 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 MKRN3Q13064 507 aaKnown RBP8.36□□□□□ -1.07
BDNF-209ENST00000420794 SPECC1Q5M775 1068 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 RNF207Q6ZRF8 634 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 DAGLBQ8NCG7 672 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 PGBD1Q96JS3 809 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 TEX13BQ9BXU2 312 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 CLSTN2Q9H4D0 955 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 PCDHA6Q9UN73 950 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 PCDHA8Q9Y5H6 950 aa8.36□□□□□ -1.07
BDNF-209ENST00000420794 SRPRBQ9Y5M8 271 aaKnown RBP8.36□□□□□ -1.07
BDNF-209ENST00000420794 IDEP14735 1019 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 PFKFB1P16118 471 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 VCAM1P19320 739 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 HOXA13P31271 388 aaPredicted RBP8.35□□□□□ -1.07
BDNF-209ENST00000420794 CCT6AP40227 531 aaKnown RBP8.35□□□□□ -1.07
BDNF-209ENST00000420794 PPATQ06203 517 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 PLA2G4DQ86XP0 818 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 TEX2Q8IWB9 1127 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 MB21D1Q8N884 522 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms