RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 FRMPD2Q68DX3 1309 aaPredicted RBP12.31□□□□□ -0.44
RFC1-203ENST00000418436 CENPFP49454 3210 aa12.3□□□□□ -0.44
RFC1-203ENST00000418436 SMCHD1A6NHR9 2005 aa12.3□□□□□ -0.44
RFC1-203ENST00000418436 PLXNA1Q9UIW2 1896 aa12.3□□□□□ -0.44
RFC1-203ENST00000418436 ERICH2A1L162 156 aa12.3□□□□□ -0.44
RFC1-203ENST00000418436 CCDC85CA6NKD9 419 aa12.3□□□□□ -0.44
RFC1-203ENST00000418436 HOXC6P09630 235 aa12.3□□□□□ -0.44
RFC1-203ENST00000418436 MAP2K5Q13163 448 aa12.3□□□□□ -0.44
RFC1-203ENST00000418436 WTAPQ15007 396 aa12.3□□□□□ -0.44
RFC1-203ENST00000418436 SART3Q15020 963 aaKnown RBP12.3□□□□□ -0.44
RFC1-203ENST00000418436 SNRNP48Q6IEG0 339 aaKnown RBP12.3□□□□□ -0.44
RFC1-203ENST00000418436 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.3□□□□□ -0.44
RFC1-203ENST00000418436 NCAPG2Q86XI2 1143 aa12.3□□□□□ -0.44
RFC1-203ENST00000418436 ABRAQ8N0Z2 381 aa12.3□□□□□ -0.44
RFC1-203ENST00000418436 SH3TC2Q8TF17 1288 aa12.3□□□□□ -0.44
RFC1-203ENST00000418436 TMEM87BQ96K49 555 aa12.3□□□□□ -0.44
RFC1-203ENST00000418436 NEK1Q96PY6 1258 aa12.3□□□□□ -0.44
RFC1-203ENST00000418436 RANBP17Q9H2T7 1088 aaKnown RBP12.3□□□□□ -0.44
RFC1-203ENST00000418436 SENP2Q9HC62 589 aa12.3□□□□□ -0.44
RFC1-203ENST00000418436 RAVER2Q9HCJ3 691 aaKnown RBP12.3□□□□□ -0.44
RFC1-203ENST00000418436 GPCPD1Q9NPB8 672 aa12.3□□□□□ -0.44
RFC1-203ENST00000418436 ISY1Q9ULR0 285 aaKnown RBP12.3□□□□□ -0.44
RFC1-203ENST00000418436 RIPK3Q9Y572 518 aa12.3□□□□□ -0.44
RFC1-203ENST00000418436 IVNS1ABPQ9Y6Y0 642 aa12.3□□□□□ -0.44
RFC1-203ENST00000418436 HRO43593 1189 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 PRC1O43663 620 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 IGHA2P01877 340 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 ZKSCAN1P17029 563 aaPredicted RBP12.29□□□□□ -0.44
RFC1-203ENST00000418436 CYP2B6P20813 491 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 SLC16A2P36021 539 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 RGS2P41220 211 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 LIFRP42702 1097 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 EXOSC10Q01780 885 aaKnown RBP12.29□□□□□ -0.44
RFC1-203ENST00000418436 TROAPQ12815 778 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 IKQ13123 557 aaPredicted RBP12.29□□□□□ -0.44
RFC1-203ENST00000418436 KRT32Q14532 448 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 ADCK5Q3MIX3 580 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 ASPRV1Q53RT3 343 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 TMEM67Q5HYA8 995 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 SYDE2Q5VT97 1194 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 WDR78Q5VTH9 848 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 TYW1BQ6NUM6 668 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 CPXCR1Q8N123 301 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 USP26Q9BXU7 913 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 LY9Q9HBG7 655 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 CWC22Q9HCG8 908 aaKnown RBP12.29□□□□□ -0.44
RFC1-203ENST00000418436 CTDP1Q9Y5B0 961 aaPredicted RBP12.29□□□□□ -0.44
RFC1-203ENST00000418436 WDR19Q8NEZ3 1342 aa12.29□□□□□ -0.44
RFC1-203ENST00000418436 PALM3A6NDB9 673 aaPredicted RBP12.28□□□□□ -0.44
RFC1-203ENST00000418436 SH2B2O14492 632 aaPredicted RBP12.28□□□□□ -0.44
RFC1-203ENST00000418436 PARP1P09874 1014 aaKnown RBP12.28□□□□□ -0.44
RFC1-203ENST00000418436 GOLGA8HP0CJ92 632 aa12.28□□□□□ -0.44
RFC1-203ENST00000418436 FCER1AP12319 257 aa12.28□□□□□ -0.44
RFC1-203ENST00000418436 ELNP15502 786 aa12.28□□□□□ -0.44
RFC1-203ENST00000418436 ADORA2AP29274 412 aa12.28□□□□□ -0.44
RFC1-203ENST00000418436 DHX32Q7L7V1 743 aaKnown RBP12.28□□□□□ -0.44
RFC1-203ENST00000418436 TRMT44Q8IYL2 757 aaKnown RBP12.28□□□□□ -0.44
RFC1-203ENST00000418436 TMTC2Q8N394 836 aa12.28□□□□□ -0.44
RFC1-203ENST00000418436 CHST13Q8NET6 341 aa12.28□□□□□ -0.44
RFC1-203ENST00000418436 APBA2Q99767 749 aa12.28□□□□□ -0.44
RFC1-203ENST00000418436 SLC4A5Q9BY07 1137 aa12.28□□□□□ -0.44
RFC1-203ENST00000418436 SNX14Q9Y5W7 946 aa12.28□□□□□ -0.44
RFC1-203ENST00000418436 MYH6P13533 1939 aa12.28□□□□□ -0.44
RFC1-203ENST00000418436 COBLO75128 1261 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 HMGCRP04035 888 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 INHAP05111 366 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 ICAM1P05362 532 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 SNAP25P60880 206 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 UBXN2AP68543 259 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 GRM4Q14833 912 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 CCL14Q16627 93 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 TKFCQ3LXA3 575 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 STAG2Q8N3U4 1231 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 NPLOC4Q8TAT6 608 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 TRIB2Q92519 343 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 AGBL1Q96MI9 1066 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 MMP19Q99542 508 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 MAP3K14Q99558 947 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 EPAS1Q99814 870 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 UBA5Q9GZZ9 404 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 CPVLQ9H3G5 476 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 FBXO40Q9UH90 709 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 MAD2L2Q9UI95 211 aa12.27□□□□□ -0.45
RFC1-203ENST00000418436 DNAJC25-GNG10A0A024R161 153 aa12.26□□□□□ -0.45
RFC1-203ENST00000418436 HMGB1P09429 215 aaKnown RBP12.26□□□□□ -0.45
RFC1-203ENST00000418436 KCTD2Q14681 263 aa12.26□□□□□ -0.45
RFC1-203ENST00000418436 MTFR1Q15390 333 aa12.26□□□□□ -0.45
RFC1-203ENST00000418436 ZNF792Q3KQV3 632 aa12.26□□□□□ -0.45
RFC1-203ENST00000418436 MAP3K21Q5TCX8 1036 aa12.26□□□□□ -0.45
RFC1-203ENST00000418436 CCDC174Q6PII3 467 aa12.26□□□□□ -0.45
RFC1-203ENST00000418436 CATIPQ7Z7H3 387 aa12.26□□□□□ -0.45
RFC1-203ENST00000418436 DPP9Q86TI2 863 aa12.26□□□□□ -0.45
RFC1-203ENST00000418436 SGMS1Q86VZ5 419 aa12.26□□□□□ -0.45
RFC1-203ENST00000418436 ADGRF4Q8IZF3 695 aa12.26□□□□□ -0.45
RFC1-203ENST00000418436 ZNF654Q8IZM8 581 aa12.26□□□□□ -0.45
RFC1-203ENST00000418436 FLRT1Q9NZU1 646 aa12.26□□□□□ -0.45
RFC1-203ENST00000418436 PNMA2Q9UL42 364 aa12.26□□□□□ -0.45
RFC1-203ENST00000418436 VPS9D1Q9Y2B5 631 aa12.26□□□□□ -0.45
RFC1-203ENST00000418436 DIS3Q9Y2L1 958 aaKnown RBP12.26□□□□□ -0.45
RFC1-203ENST00000418436 KLRF2D3W0D1 207 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms