RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 HMOX1P09601 288 aa6.9□□□□□ -1.3
ECHDC1-206ENST00000417628 GNA15P30679 374 aa6.9□□□□□ -1.3
ECHDC1-206ENST00000417628 EPHB4P54760 987 aa6.9□□□□□ -1.3
ECHDC1-206ENST00000417628 TCF15Q12870 199 aa6.9□□□□□ -1.3
ECHDC1-206ENST00000417628 TRIB2Q92519 343 aa6.9□□□□□ -1.3
ECHDC1-206ENST00000417628 CEP63Q96MT8 703 aa6.9□□□□□ -1.3
ECHDC1-206ENST00000417628 ZCCHC2Q9C0B9 1178 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-206ENST00000417628 TMEM63CQ9P1W3 806 aa6.9□□□□□ -1.3
ECHDC1-206ENST00000417628 TRMT112Q9UI30 125 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-206ENST00000417628 DACH1Q9UI36 760 aa6.9□□□□□ -1.3
ECHDC1-206ENST00000417628 NAP1L2Q9ULW6 460 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-206ENST00000417628 CHD8Q9HCK8 2581 aa6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 TRIM43BA6NCK2 446 aa6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 SCAMP3O14828 347 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 CPNE3O75131 537 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 THBS1P07996 1170 aa6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 RPS8P62241 208 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 HDLBPQ00341 1268 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 FPGSQ05932 587 aa6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 PPATQ06203 517 aa6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 RAB30Q15771 203 aa6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 PDE12Q6L8Q7 609 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 DGLUCYQ7Z3D6 616 aa6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 ZNF438Q7Z4V0 828 aa6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 CRIPAKQ8N1N5 446 aa6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 TRIM43Q96BQ3 446 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 WRNIP1Q96S55 665 aa6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 IRF2BPLQ9H1B7 796 aa6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 MRS2Q9HD23 443 aa6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 MSRAQ9UJ68 235 aa6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 FNDC3AQ9Y2H6 1198 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 XDHP47989 1333 aa6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 MED23Q9ULK4 1368 aa6.89□□□□□ -1.31
ECHDC1-206ENST00000417628 RPAP1Q9BWH6 1393 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 NRG2O14511 850 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 AXIN1O15169 862 aa6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 MYL6BP14649 208 aa6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 CDK11BP21127 795 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 SF3B3Q15393 1217 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 CFAP100Q494V2 611 aa6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 SAMD5Q5TGI4 173 aa6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 PI16Q6UXB8 463 aa6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 ASCL5Q7RTU5 278 aa6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 NLRP10Q86W26 655 aa6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 NLRP8Q86W28 1048 aa6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 FAM178BQ8IXR5 827 aa6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 TMEM87AQ8NBN3 555 aa6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 SNX29Q8TEQ0 813 aa6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 CCDC74AQ96AQ1 378 aa6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 TEPSINQ96N21 525 aa6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 CHRDQ9H2X0 955 aa6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 SLC28A3Q9HAS3 691 aa6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 VTI1BQ9UEU0 232 aa6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 RALYQ9UKM9 306 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 RRP7AQ9Y3A4 280 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 PCDHAC2Q9Y5I4 1007 aa6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 AK5Q9Y6K8 562 aa6.88□□□□□ -1.31
ECHDC1-206ENST00000417628 EPG5Q9HCE0 2579 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 ZNF318Q5VUA4 2279 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 SOBPA7XYQ1 873 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 GRXCR1A8MXD5 290 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 PROB1E7EW31 1015 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 XYLBO75191 536 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 CTSHP09668 335 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 IRS1P35568 1242 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 MOGSQ13724 837 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 HSP90AA2PQ14568 343 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 TRIM60Q495X7 471 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 PKDCCQ504Y2 493 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 TTLL5Q6EMB2 1281 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 METTL16Q86W50 562 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 EPS8L3Q8TE67 593 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 SMCR8Q8TEV9 937 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 ATOH1Q92858 354 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 COA1Q9GZY4 146 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 NKX2-4Q9H2Z4 354 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 BRD7Q9NPI1 651 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 CNTN3Q9P232 1028 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 USP34Q70CQ2 3546 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 ARAP2Q8WZ64 1704 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 COL4A6Q14031 1691 aa6.87□□□□□ -1.31
ECHDC1-206ENST00000417628 ATRXP46100 2492 aa6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 AOX1Q06278 1338 aa6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 MYBBP1AQ9BQG0 1328 aaKnown RBP6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 PRR23AA6NEV1 266 aa6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 DNM1LO00429 736 aa6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 PHACTR2O75167 634 aa6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 EPB42P16452 691 aa6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 CCND3P30281 292 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 FANCCQ00597 558 aa6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 UBAP2LQ14157 1087 aaKnown RBP6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 HSP90AB3PQ58FF7 597 aa6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 GPAT2Q6NUI2 795 aa6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 SLC39A5Q6ZMH5 540 aa6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 PGBD3Q8N328 593 aa6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 PRMT6Q96LA8 375 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 FRMD6Q96NE9 622 aa6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 OSBPL7Q9BZF2 842 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms