RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 LMBR1LQ6UX01 489 aa9.94□□□□□ -0.82
SP140-204ENST00000417495 TAS1R3Q7RTX0 852 aa9.94□□□□□ -0.82
SP140-204ENST00000417495 DNAJC10Q8IXB1 793 aa9.94□□□□□ -0.82
SP140-204ENST00000417495 KBTBD3Q8NAB2 608 aa9.94□□□□□ -0.82
SP140-204ENST00000417495 DDX54Q8TDD1 881 aaKnown RBP9.94□□□□□ -0.82
SP140-204ENST00000417495 DSCC1Q9BVC3 393 aa9.94□□□□□ -0.82
SP140-204ENST00000417495 MAK16Q9BXY0 300 aaKnown RBP9.94□□□□□ -0.82
SP140-204ENST00000417495 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.94□□□□□ -0.82
SP140-204ENST00000417495 FBXO9Q9UK97 447 aaPredicted RBP9.94□□□□□ -0.82
SP140-204ENST00000417495 PA2G4Q9UQ80 394 aaKnown RBP9.94□□□□□ -0.82
SP140-204ENST00000417495 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.94□□□□□ -0.82
SP140-204ENST00000417495 BTAF1O14981 1849 aa9.94□□□□□ -0.82
SP140-204ENST00000417495 ADCY5O95622 1261 aa9.94□□□□□ -0.82
SP140-204ENST00000417495 VIL1P09327 827 aaKnown RBP9.94□□□□□ -0.82
SP140-204ENST00000417495 ROR2Q01974 943 aaKnown RBP9.94□□□□□ -0.82
SP140-204ENST00000417495 SMC1AQ14683 1233 aaKnown RBP9.94□□□□□ -0.82
SP140-204ENST00000417495 DDB1Q16531 1140 aa9.94□□□□□ -0.82
SP140-204ENST00000417495 KIF4BQ2VIQ3 1234 aa9.94□□□□□ -0.82
SP140-204ENST00000417495 CEP135Q66GS9 1140 aa9.94□□□□□ -0.82
SP140-204ENST00000417495 SLC30A9Q6PML9 568 aa9.94□□□□□ -0.82
SP140-204ENST00000417495 PACS1Q6VY07 963 aa9.94□□□□□ -0.82
SP140-204ENST00000417495 MTRQ99707 1265 aa9.94□□□□□ -0.82
SP140-204ENST00000417495 DNAAF2Q9NVR5 837 aaKnown RBP9.94□□□□□ -0.82
SP140-204ENST00000417495 HDAC6Q9UBN7 1215 aa9.94□□□□□ -0.82
SP140-204ENST00000417495 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.94□□□□□ -0.82
SP140-204ENST00000417495 DBNLQ9UJU6 430 aaKnown RBP9.94□□□□□ -0.82
SP140-204ENST00000417495 TIAM2Q8IVF5 1701 aa9.94□□□□□ -0.82
SP140-204ENST00000417495 SYCE3A1L190 88 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 CEP104O60308 925 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 DNAJC6O75061 913 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 TRIM37O94972 964 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 CDKN1CP49918 316 aaPredicted RBP9.93□□□□□ -0.82
SP140-204ENST00000417495 POU5F1Q01860 360 aaKnown RBP9.93□□□□□ -0.82
SP140-204ENST00000417495 SLC35B4Q969S0 331 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 SPDL1Q96EA4 605 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 ALS2CR12Q96Q35 445 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 CCDC87Q9NVE4 849 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 CXXC1Q9P0U4 656 aaPredicted RBP9.93□□□□□ -0.82
SP140-204ENST00000417495 ASAP1Q9ULH1 1129 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 PRC1O43663 620 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 PDE8AO60658 829 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 IGHA2P01877 340 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 MYCLP1P12525 358 aaPredicted RBP9.93□□□□□ -0.82
SP140-204ENST00000417495 NUP133Q8WUM0 1156 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 RBM41Q96IZ5 413 aaKnown RBP9.93□□□□□ -0.82
SP140-204ENST00000417495 TMX3Q96JJ7 454 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 SLC4A9Q96Q91 983 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 BRD8Q9H0E9 1235 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 KCNF1Q9H3M0 494 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 ZBTB3Q9H5J0 574 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 SENP2Q9HC62 589 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 MAPK8IP1Q9UQF2 711 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.93□□□□□ -0.82
SP140-204ENST00000417495 RGPD3A6NKT7 1758 aaPredicted RBP9.93□□□□□ -0.82
SP140-204ENST00000417495 RGPD4Q7Z3J3 1758 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 SORBS3O60504 671 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 LDHBP07195 334 aaKnown RBP9.93□□□□□ -0.82
SP140-204ENST00000417495 FOSL1P15407 271 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 ZNF132P52740 706 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 TFCP2Q12800 502 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 COL19A1Q14993 1142 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 Q4G0T1 1027 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 ZFAND2BQ8WV99 257 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 GIMAP1Q8WWP7 306 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 RUFY1Q96T51 708 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 LIMCH1Q9UPQ0 1083 aa9.93□□□□□ -0.82
SP140-204ENST00000417495 MAST2Q6P0Q8 1798 aa9.92□□□□□ -0.82
SP140-204ENST00000417495 MROH5Q6ZUA9 1318 aa9.92□□□□□ -0.82
SP140-204ENST00000417495 RCCD1A6NED2 376 aa9.92□□□□□ -0.82
SP140-204ENST00000417495 MSL3P1P0C860 447 aa9.92□□□□□ -0.82
SP140-204ENST00000417495 INTS5Q6P9B9 1019 aaKnown RBP9.92□□□□□ -0.82
SP140-204ENST00000417495 NYAP1Q6ZVC0 841 aa9.92□□□□□ -0.82
SP140-204ENST00000417495 PEX5LQ8IYB4 626 aa9.92□□□□□ -0.82
SP140-204ENST00000417495 RNF168Q8IYW5 571 aaPredicted RBP9.92□□□□□ -0.82
SP140-204ENST00000417495 CCDC150Q8NCX0 1101 aa9.92□□□□□ -0.82
SP140-204ENST00000417495 SFMBT1Q9UHJ3 866 aa9.92□□□□□ -0.82
SP140-204ENST00000417495 PDS5AQ29RF7 1337 aaKnown RBP9.92□□□□□ -0.82
SP140-204ENST00000417495 MYH14Q7Z406 1995 aaKnown RBP9.92□□□□□ -0.82
SP140-204ENST00000417495 TREHO43280 583 aa9.92□□□□□ -0.82
SP140-204ENST00000417495 LZTS3O60299 673 aaPredicted RBP9.92□□□□□ -0.82
SP140-204ENST00000417495 ZKSCAN1P17029 563 aaPredicted RBP9.92□□□□□ -0.82
SP140-204ENST00000417495 CA8P35219 290 aa9.92□□□□□ -0.82
SP140-204ENST00000417495 ZMYM1Q5SVZ6 1142 aa9.92□□□□□ -0.82
SP140-204ENST00000417495 C10orf62Q5T681 223 aaPredicted RBP9.92□□□□□ -0.82
SP140-204ENST00000417495 TLDC1Q6P9B6 456 aa9.92□□□□□ -0.82
SP140-204ENST00000417495 REM2Q8IYK8 340 aaPredicted RBP9.92□□□□□ -0.82
SP140-204ENST00000417495 CCDC170Q8IYT3 715 aa9.92□□□□□ -0.82
SP140-204ENST00000417495 RBM42Q9BTD8 480 aaKnown RBP9.92□□□□□ -0.82
SP140-204ENST00000417495 MKS1Q9NXB0 559 aa9.92□□□□□ -0.82
SP140-204ENST00000417495 EIF3FO00303 357 aaPredicted RBP9.91□□□□□ -0.82
SP140-204ENST00000417495 PITPNM1O00562 1244 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 TAF5LO75529 589 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 LDHAP00338 332 aaKnown RBP9.91□□□□□ -0.82
SP140-204ENST00000417495 TRIM21P19474 475 aaKnown RBP9.91□□□□□ -0.82
SP140-204ENST00000417495 GNALP38405 381 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 NT5C2P49902 561 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 NEK4P51957 841 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 CTSWP56202 376 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 SERINC3Q13530 473 aa9.91□□□□□ -0.82
SP140-204ENST00000417495 MCMDC2Q4G0Z9 681 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms