RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 RNF207Q6ZRF8 634 aa12.85□□□□□ -0.35
TM9SF4-203ENST00000417389 DHX32Q7L7V1 743 aaKnown RBP12.85□□□□□ -0.35
TM9SF4-203ENST00000417389 MICU3Q86XE3 530 aa12.85□□□□□ -0.35
TM9SF4-203ENST00000417389 DPF3Q92784 378 aa12.85□□□□□ -0.35
TM9SF4-203ENST00000417389 MTA3Q9BTC8 594 aa12.85□□□□□ -0.35
TM9SF4-203ENST00000417389 JMJD4Q9H9V9 463 aa12.85□□□□□ -0.35
TM9SF4-203ENST00000417389 CYP39A1Q9NYL5 469 aa12.85□□□□□ -0.35
TM9SF4-203ENST00000417389 ABCB11O95342 1321 aa12.85□□□□□ -0.35
TM9SF4-203ENST00000417389 WDR19Q8NEZ3 1342 aa12.85□□□□□ -0.35
TM9SF4-203ENST00000417389 DNAJC25-GNG10A0A024R161 153 aa12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 PALM3A6NDB9 673 aaPredicted RBP12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 ASB14A6NK59 587 aa12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 CALM1P0DP23 149 aa12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 CALM2P0DP24 149 aa12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 CALM3P0DP25 149 aa12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 CAPN2P17655 700 aa12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 PSMA5P28066 241 aa12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 HSPA4P34932 840 aa12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 TROAPQ12815 778 aa12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 BLOC1S2Q6QNY1 142 aa12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 NOL8Q76FK4 1167 aaKnown RBP12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 NECAB2Q7Z6G3 386 aa12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 MSL3Q8N5Y2 521 aaKnown RBP12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 TRPV1Q8NER1 839 aa12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 PAWRQ96IZ0 340 aaKnown RBP12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 MPHOSPH6Q99547 160 aaKnown RBP12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 HTATIP2Q9BUP3 242 aa12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 AMNQ9BXJ7 453 aa12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 ADD3Q9UEY8 706 aaKnown RBP12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 SEC63Q9UGP8 760 aaKnown RBP12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 MRPL11Q9Y3B7 192 aaKnown RBP12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 SNX14Q9Y5W7 946 aa12.84□□□□□ -0.35
TM9SF4-203ENST00000417389 ZBTB5O15062 677 aa12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 SEPT4O43236 478 aa12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 RARBP10826 455 aa12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 CPA1P15085 419 aa12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 CASTP20810 708 aaKnown RBP12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 LIFRP42702 1097 aa12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 GNAQP50148 359 aa12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 TRAF1Q13077 416 aa12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 COL9A3Q14050 684 aaPredicted RBP12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 SLC30A10Q6XR72 485 aa12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 ARMCX2Q7L311 632 aa12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 EEPD1Q7L9B9 569 aa12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 ZNF467Q7Z7K2 595 aaPredicted RBP12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 MCF2L2Q86YR7 1114 aa12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 CCDC82Q8N4S0 544 aa12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 DIS3LQ8TF46 1054 aaKnown RBP12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 RRP36Q96EU6 259 aaKnown RBP12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 PIGSQ96S52 555 aa12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 CRISPLD2Q9H0B8 497 aa12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 RBBP6Q7Z6E9 1792 aaKnown RBP12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 SYNGAP1Q96PV0 1343 aa12.83□□□□□ -0.36
TM9SF4-203ENST00000417389 KLF18A0A0U1RQI7 1052 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 SOWAHBA6NEL2 793 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 KBTBD13C9JR72 458 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 ZBTB43O43298 467 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 EIF5BO60841 1220 aaKnown RBP12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 CFBP00751 764 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 AKR1A1P14550 325 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 RPS6P62753 249 aaKnown RBP12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 ACVR2BQ13705 512 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 TSGA10IPQ3SY00 556 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 LHX8Q68G74 356 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 CMTR1Q8N1G2 835 aaKnown RBP12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 FAM133AQ8N9E0 248 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 ANKLE1Q8NAG6 615 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 ARRDC4Q8NCT1 418 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 CLEC4DQ8WXI8 215 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 PURBQ96QR8 312 aaKnown RBP12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 LZTS2Q9BRK4 669 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 ABHD16BQ9H3Z7 469 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 C11orf49Q9H6J7 331 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 XPNPEP3Q9NQH7 507 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 NRBP1Q9UHY1 535 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 OGDHLQ9ULD0 1010 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 FAM184BQ9ULE4 1060 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 PCDHA1Q9Y5I3 950 aa12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 ZNFX1Q9P2E3 1918 aaKnown RBP12.82□□□□□ -0.36
TM9SF4-203ENST00000417389 PNMA6FA0A0J9YX94 578 aa12.81□□□□□ -0.36
TM9SF4-203ENST00000417389 GOLGA8AA7E2F4 631 aa12.81□□□□□ -0.36
TM9SF4-203ENST00000417389 GOLGA8BA8MQT2 603 aa12.81□□□□□ -0.36
TM9SF4-203ENST00000417389 B4DLN1 442 aa12.81□□□□□ -0.36
TM9SF4-203ENST00000417389 SNAI1O95863 264 aaPredicted RBP12.81□□□□□ -0.36
TM9SF4-203ENST00000417389 MRPL12P52815 198 aaKnown RBP12.81□□□□□ -0.36
TM9SF4-203ENST00000417389 PDE4DQ08499 809 aa12.81□□□□□ -0.36
TM9SF4-203ENST00000417389 GJC2Q5T442 439 aaPredicted RBP12.81□□□□□ -0.36
TM9SF4-203ENST00000417389 MAMDC4Q6UXC1 1216 aa12.81□□□□□ -0.36
TM9SF4-203ENST00000417389 Q6ZUG5 572 aa12.81□□□□□ -0.36
TM9SF4-203ENST00000417389 FANCBQ8NB91 859 aa12.81□□□□□ -0.36
TM9SF4-203ENST00000417389 MAP3K14Q99558 947 aa12.81□□□□□ -0.36
TM9SF4-203ENST00000417389 USP26Q9BXU7 913 aa12.81□□□□□ -0.36
TM9SF4-203ENST00000417389 DDX49Q9Y6V7 483 aaKnown RBP12.81□□□□□ -0.36
TM9SF4-203ENST00000417389 BRCA2P51587 3418 aa12.81□□□□□ -0.36
TM9SF4-203ENST00000417389 PLXNA1Q9UIW2 1896 aa12.8□□□□□ -0.36
TM9SF4-203ENST00000417389 PLEKHA8P1O95397 391 aa12.8□□□□□ -0.36
TM9SF4-203ENST00000417389 ZNF865P0CJ78 1059 aaPredicted RBP12.8□□□□□ -0.36
TM9SF4-203ENST00000417389 RPS6KB1P23443 525 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms