RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 NKX2-4Q9H2Z4 354 aa11.93□□□□□ -0.5
MDC1-202ENST00000416571 RNF146Q9NTX7 359 aa11.93□□□□□ -0.5
MDC1-202ENST00000416571 MYO9BQ13459 2157 aa11.92□□□□□ -0.5
MDC1-202ENST00000416571 RNF113AO15541 343 aaKnown RBP11.92□□□□□ -0.5
MDC1-202ENST00000416571 CD4P01730 458 aa11.92□□□□□ -0.5
MDC1-202ENST00000416571 SLC1A4P43007 532 aa11.92□□□□□ -0.5
MDC1-202ENST00000416571 FSCN1Q16658 493 aaKnown RBP11.92□□□□□ -0.5
MDC1-202ENST00000416571 TKFCQ3LXA3 575 aa11.92□□□□□ -0.5
MDC1-202ENST00000416571 PPP4R3BQ5MIZ7 849 aa11.92□□□□□ -0.5
MDC1-202ENST00000416571 OTOP2Q7RTS6 562 aa11.92□□□□□ -0.5
MDC1-202ENST00000416571 FAM160B2Q86V87 743 aa11.92□□□□□ -0.5
MDC1-202ENST00000416571 RPUSD2Q8IZ73 545 aaKnown RBP11.92□□□□□ -0.5
MDC1-202ENST00000416571 FAM133AQ8N9E0 248 aa11.92□□□□□ -0.5
MDC1-202ENST00000416571 TRERF1Q96PN7 1200 aa11.92□□□□□ -0.5
MDC1-202ENST00000416571 KATNBL1Q9H079 304 aa11.92□□□□□ -0.5
MDC1-202ENST00000416571 EPB41L4AQ9HCS5 686 aaPredicted RBP11.92□□□□□ -0.5
MDC1-202ENST00000416571 A1CFQ9NQ94 594 aaKnown RBP11.92□□□□□ -0.5
MDC1-202ENST00000416571 CXXC1Q9P0U4 656 aaPredicted RBP11.92□□□□□ -0.5
MDC1-202ENST00000416571 LRRC37A2A6NM11 1700 aa11.91□□□□□ -0.5
MDC1-202ENST00000416571 ZBBXA8MT70 800 aa11.91□□□□□ -0.5
MDC1-202ENST00000416571 PATL2C9JE40 543 aaKnown RBP11.91□□□□□ -0.5
MDC1-202ENST00000416571 CTAGE5O15320 804 aa11.91□□□□□ -0.5
MDC1-202ENST00000416571 DYNC1LI2O43237 492 aaPredicted RBP11.91□□□□□ -0.5
MDC1-202ENST00000416571 ALAS1P13196 640 aa11.91□□□□□ -0.5
MDC1-202ENST00000416571 CCL23P55773 120 aa11.91□□□□□ -0.5
MDC1-202ENST00000416571 NKX3-2P78367 333 aa11.91□□□□□ -0.5
MDC1-202ENST00000416571 TFAP4Q01664 338 aa11.91□□□□□ -0.5
MDC1-202ENST00000416571 PPP2R2DQ66LE6 453 aa11.91□□□□□ -0.5
MDC1-202ENST00000416571 IFNL3Q8IZI9 196 aa11.91□□□□□ -0.5
MDC1-202ENST00000416571 SLC43A3Q8NBI5 491 aa11.91□□□□□ -0.5
MDC1-202ENST00000416571 NEDD1Q8NHV4 660 aa11.91□□□□□ -0.5
MDC1-202ENST00000416571 ADAMTS19Q8TE59 1207 aa11.91□□□□□ -0.5
MDC1-202ENST00000416571 CHMP4CQ96CF2 233 aa11.91□□□□□ -0.5
MDC1-202ENST00000416571 AGBL1Q96MI9 1066 aa11.91□□□□□ -0.5
MDC1-202ENST00000416571 UHRF1Q96T88 793 aaPredicted RBP11.91□□□□□ -0.5
MDC1-202ENST00000416571 NAPBQ9H115 298 aa11.91□□□□□ -0.5
MDC1-202ENST00000416571 STX8Q9UNK0 236 aa11.91□□□□□ -0.5
MDC1-202ENST00000416571 GNEQ9Y223 722 aaKnown RBP11.91□□□□□ -0.5
MDC1-202ENST00000416571 SLC4A7Q9Y6M7 1214 aa11.91□□□□□ -0.5
MDC1-202ENST00000416571 PLIN4Q96Q06 1357 aa11.91□□□□□ -0.5
MDC1-202ENST00000416571 ASTN1O14525 1302 aa11.9□□□□□ -0.5
MDC1-202ENST00000416571 UMODL1Q5DID0 1318 aa11.9□□□□□ -0.5
MDC1-202ENST00000416571 SOWAHBA6NEL2 793 aa11.9□□□□□ -0.5
MDC1-202ENST00000416571 M0R2C6 588 aa11.9□□□□□ -0.5
MDC1-202ENST00000416571 ADGRE1Q14246 886 aa11.9□□□□□ -0.5
MDC1-202ENST00000416571 IQSEC1Q6DN90 963 aa11.9□□□□□ -0.5
MDC1-202ENST00000416571 EEPD1Q7L9B9 569 aa11.9□□□□□ -0.5
MDC1-202ENST00000416571 MICALL1Q8N3F8 863 aa11.9□□□□□ -0.5
MDC1-202ENST00000416571 STAG1Q8WVM7 1258 aa11.9□□□□□ -0.5
MDC1-202ENST00000416571 GMCL1Q96IK5 515 aa11.9□□□□□ -0.5
MDC1-202ENST00000416571 TSPY2A6NKD2 308 aa11.89□□□□□ -0.51
MDC1-202ENST00000416571 B4GALT4O60513 344 aa11.89□□□□□ -0.51
MDC1-202ENST00000416571 SUPT20HL2P0C7V6 817 aa11.89□□□□□ -0.51
MDC1-202ENST00000416571 SMPD1P17405 629 aa11.89□□□□□ -0.51
MDC1-202ENST00000416571 MCCP23508 829 aa11.89□□□□□ -0.51
MDC1-202ENST00000416571 TSHZ3Q63HK5 1081 aa11.89□□□□□ -0.51
MDC1-202ENST00000416571 NSMFQ6X4W1 530 aa11.89□□□□□ -0.51
MDC1-202ENST00000416571 KIAA1211Q6ZU35 1233 aa11.89□□□□□ -0.51
MDC1-202ENST00000416571 KCTD1Q719H9 257 aa11.89□□□□□ -0.51
MDC1-202ENST00000416571 FBXO16Q8IX29 292 aaPredicted RBP11.89□□□□□ -0.51
MDC1-202ENST00000416571 NOC4LQ9BVI4 516 aaKnown RBP11.89□□□□□ -0.51
MDC1-202ENST00000416571 TRPV6Q9H1D0 765 aa11.89□□□□□ -0.51
MDC1-202ENST00000416571 VTA1Q9NP79 307 aa11.89□□□□□ -0.51
MDC1-202ENST00000416571 YBX2Q9Y2T7 364 aaKnown RBP11.89□□□□□ -0.51
MDC1-202ENST00000416571 Q9Y3F1 56 aa11.89□□□□□ -0.51
MDC1-202ENST00000416571 ZNF536O15090 1300 aa11.88□□□□□ -0.51
MDC1-202ENST00000416571 ATP2A2P16615 1042 aaKnown RBP11.88□□□□□ -0.51
MDC1-202ENST00000416571 RABGGTBP53611 331 aa11.88□□□□□ -0.51
MDC1-202ENST00000416571 PSMC6P62333 389 aa11.88□□□□□ -0.51
MDC1-202ENST00000416571 PPARAQ07869 468 aa11.88□□□□□ -0.51
MDC1-202ENST00000416571 SKIV2LQ15477 1246 aaKnown RBP11.88□□□□□ -0.51
MDC1-202ENST00000416571 AAK1Q2M2I8 961 aa11.88□□□□□ -0.51
MDC1-202ENST00000416571 CCDC96Q2M329 555 aa11.88□□□□□ -0.51
MDC1-202ENST00000416571 RCSD1Q6JBY9 416 aa11.88□□□□□ -0.51
MDC1-202ENST00000416571 SCLYQ96I15 445 aa11.88□□□□□ -0.51
MDC1-202ENST00000416571 WNT8AQ9H1J5 351 aa11.88□□□□□ -0.51
MDC1-202ENST00000416571 GPHNQ9NQX3 736 aaPredicted RBP11.88□□□□□ -0.51
MDC1-202ENST00000416571 PDGFCQ9NRA1 345 aa11.88□□□□□ -0.51
MDC1-202ENST00000416571 POLR3EQ9NVU0 708 aa11.88□□□□□ -0.51
MDC1-202ENST00000416571 CYP39A1Q9NYL5 469 aa11.88□□□□□ -0.51
MDC1-202ENST00000416571 ADD3Q9UEY8 706 aaKnown RBP11.88□□□□□ -0.51
MDC1-202ENST00000416571 CCPG1Q9ULG6 757 aa11.88□□□□□ -0.51
MDC1-202ENST00000416571 PRR12Q9ULL5 1215 aa11.88□□□□□ -0.51
MDC1-202ENST00000416571 MTMR7Q9Y216 660 aa11.88□□□□□ -0.51
MDC1-202ENST00000416571 PCDHA11Q9Y5I1 949 aa11.88□□□□□ -0.51
MDC1-202ENST00000416571 GRIN2DO15399 1336 aa11.87□□□□□ -0.51
MDC1-202ENST00000416571 GTPBP6O43824 516 aaPredicted RBP11.87□□□□□ -0.51
MDC1-202ENST00000416571 PLA2G6O60733 806 aa11.87□□□□□ -0.51
MDC1-202ENST00000416571 PFKMP08237 780 aa11.87□□□□□ -0.51
MDC1-202ENST00000416571 ACTN1P12814 892 aa11.87□□□□□ -0.51
MDC1-202ENST00000416571 PTGS1P23219 599 aa11.87□□□□□ -0.51
MDC1-202ENST00000416571 CPT1AP50416 773 aa11.87□□□□□ -0.51
MDC1-202ENST00000416571 SNAP25P60880 206 aa11.87□□□□□ -0.51
MDC1-202ENST00000416571 MUM1L1Q5H9M0 696 aa11.87□□□□□ -0.51
MDC1-202ENST00000416571 TAPT1Q6NXT6 567 aa11.87□□□□□ -0.51
MDC1-202ENST00000416571 MIER1Q8N108 512 aa11.87□□□□□ -0.51
MDC1-202ENST00000416571 FSD1Q9BTV5 496 aa11.87□□□□□ -0.51
MDC1-202ENST00000416571 ALDH8A1Q9H2A2 487 aaPredicted RBP11.87□□□□□ -0.51
MDC1-202ENST00000416571 RCAN3Q9UKA8 241 aa11.87□□□□□ -0.51
MDC1-202ENST00000416571 ARIH1Q9Y4X5 557 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms