RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 FBXW10Q5XX13 1052 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 CDPF1Q6NVV7 123 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 FBLIM1Q8WUP2 373 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 EZH1Q92800 747 aaPredicted RBP8.09□□□□□ -1.11
EPHA4-204ENST00000415749 ISL2Q96A47 359 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 TP53INP1Q96A56 240 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 DEPDC7Q96QD5 511 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 ZNRF3Q9ULT6 936 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 R3HCC1Q9Y3T6 440 aaKnown RBP8.09□□□□□ -1.11
EPHA4-204ENST00000415749 DAGLAQ9Y4D2 1042 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 CORINQ9Y5Q5 1042 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 UTRNP46939 3433 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 FAM95CA0A1B0GW59 222 aa8.08□□□□□ -1.12
EPHA4-204ENST00000415749 CCDC85CA6NKD9 419 aa8.08□□□□□ -1.12
EPHA4-204ENST00000415749 NTF4P34130 210 aa8.08□□□□□ -1.12
EPHA4-204ENST00000415749 YARSP54577 528 aaKnown RBP8.08□□□□□ -1.12
EPHA4-204ENST00000415749 EIF6P56537 245 aaKnown RBP8.08□□□□□ -1.12
EPHA4-204ENST00000415749 PAOXQ6QHF9 649 aa8.08□□□□□ -1.12
EPHA4-204ENST00000415749 TOM1L2Q6ZVM7 507 aa8.08□□□□□ -1.12
EPHA4-204ENST00000415749 OR6P1Q8NGX9 317 aa8.08□□□□□ -1.12
EPHA4-204ENST00000415749 SEMA6CQ9H3T2 930 aa8.08□□□□□ -1.12
EPHA4-204ENST00000415749 PPT2Q9UMR5 302 aa8.08□□□□□ -1.12
EPHA4-204ENST00000415749 CPDO75976 1380 aa8.08□□□□□ -1.12
EPHA4-204ENST00000415749 EXOC5O00471 708 aa8.07□□□□□ -1.12
EPHA4-204ENST00000415749 NFICP08651 508 aa8.07□□□□□ -1.12
EPHA4-204ENST00000415749 POLD1P28340 1107 aa8.07□□□□□ -1.12
EPHA4-204ENST00000415749 CAP2P40123 477 aa8.07□□□□□ -1.12
EPHA4-204ENST00000415749 RASA3Q14644 834 aa8.07□□□□□ -1.12
EPHA4-204ENST00000415749 SLC6A19Q695T7 634 aa8.07□□□□□ -1.12
EPHA4-204ENST00000415749 BEND4Q6ZU67 534 aa8.07□□□□□ -1.12
EPHA4-204ENST00000415749 CLEC10AQ8IUN9 316 aa8.07□□□□□ -1.12
EPHA4-204ENST00000415749 MCATQ8IVS2 390 aaKnown RBP8.07□□□□□ -1.12
EPHA4-204ENST00000415749 MRPL41Q8IXM3 137 aaKnown RBP8.07□□□□□ -1.12
EPHA4-204ENST00000415749 ANAPC16Q96DE5 110 aa8.07□□□□□ -1.12
EPHA4-204ENST00000415749 TMEM87BQ96K49 555 aa8.07□□□□□ -1.12
EPHA4-204ENST00000415749 MPHOSPH9Q99550 1183 aa8.07□□□□□ -1.12
EPHA4-204ENST00000415749 SLKQ9H2G2 1235 aaPredicted RBP8.07□□□□□ -1.12
EPHA4-204ENST00000415749 FANCLQ9NW38 375 aa8.07□□□□□ -1.12
EPHA4-204ENST00000415749 GMIPQ9P107 970 aa8.07□□□□□ -1.12
EPHA4-204ENST00000415749 CRYBG1Q9Y4K1 1723 aa8.06□□□□□ -1.12
EPHA4-204ENST00000415749 ACEP12821 1306 aa8.06□□□□□ -1.12
EPHA4-204ENST00000415749 CRB1P82279 1406 aa8.06□□□□□ -1.12
EPHA4-204ENST00000415749 CDC45O75419 566 aa8.06□□□□□ -1.12
EPHA4-204ENST00000415749 NFKBIBQ15653 356 aa8.06□□□□□ -1.12
EPHA4-204ENST00000415749 PLEKHG6Q3KR16 790 aa8.06□□□□□ -1.12
EPHA4-204ENST00000415749 RPUSD2Q8IZ73 545 aaKnown RBP8.06□□□□□ -1.12
EPHA4-204ENST00000415749 RBBP8NLQ8NC74 664 aaPredicted RBP8.06□□□□□ -1.12
EPHA4-204ENST00000415749 FAM13CQ8NE31 585 aa8.06□□□□□ -1.12
EPHA4-204ENST00000415749 GIMAP7Q8NHV1 300 aa8.06□□□□□ -1.12
EPHA4-204ENST00000415749 SH3TC2Q8TF17 1288 aa8.06□□□□□ -1.12
EPHA4-204ENST00000415749 FAM83CQ9BQN1 747 aa8.06□□□□□ -1.12
EPHA4-204ENST00000415749 CDK19Q9BWU1 502 aa8.06□□□□□ -1.12
EPHA4-204ENST00000415749 STOML1Q9UBI4 398 aa8.06□□□□□ -1.12
EPHA4-204ENST00000415749 TJP2Q9UDY2 1190 aa8.06□□□□□ -1.12
EPHA4-204ENST00000415749 KLHL3Q9UH77 587 aa8.06□□□□□ -1.12
EPHA4-204ENST00000415749 RAXQ9Y2V3 346 aa8.06□□□□□ -1.12
EPHA4-204ENST00000415749 PRKAB1Q9Y478 270 aa8.06□□□□□ -1.12
EPHA4-204ENST00000415749 SBF2Q86WG5 1849 aa8.06□□□□□ -1.12
EPHA4-204ENST00000415749 RGPD3A6NKT7 1758 aaPredicted RBP8.05□□□□□ -1.12
EPHA4-204ENST00000415749 RGPD4Q7Z3J3 1758 aa8.05□□□□□ -1.12
EPHA4-204ENST00000415749 TULP4Q9NRJ4 1543 aa8.05□□□□□ -1.12
EPHA4-204ENST00000415749 MEIS3P2A8K0S8 358 aa8.05□□□□□ -1.12
EPHA4-204ENST00000415749 LRIG2O94898 1065 aa8.05□□□□□ -1.12
EPHA4-204ENST00000415749 YBX3P16989 372 aaKnown RBP eCLIP8.05□□□□□ -1.12
EPHA4-204ENST00000415749 CCDC81Q6ZN84 652 aa8.05□□□□□ -1.12
EPHA4-204ENST00000415749 NLGN2Q8NFZ4 835 aa8.05□□□□□ -1.12
EPHA4-204ENST00000415749 TMEM40Q8WWA1 233 aa8.05□□□□□ -1.12
EPHA4-204ENST00000415749 ACSF2Q96CM8 615 aaPredicted RBP8.05□□□□□ -1.12
EPHA4-204ENST00000415749 FOXQ1Q9C009 403 aa8.05□□□□□ -1.12
EPHA4-204ENST00000415749 KANSL2Q9H9L4 492 aa8.05□□□□□ -1.12
EPHA4-204ENST00000415749 FBRSQ9HAH7 460 aa8.05□□□□□ -1.12
EPHA4-204ENST00000415749 CHPF2Q9P2E5 772 aa8.05□□□□□ -1.12
EPHA4-204ENST00000415749 PRKAG3Q9UGI9 489 aa8.05□□□□□ -1.12
EPHA4-204ENST00000415749 ATP7BP35670 1465 aa8.05□□□□□ -1.12
EPHA4-204ENST00000415749 BCL9O00512 1426 aa8.04□□□□□ -1.12
EPHA4-204ENST00000415749 PEAK1Q9H792 1746 aa8.04□□□□□ -1.12
EPHA4-204ENST00000415749 PARP4Q9UKK3 1724 aaKnown RBP8.04□□□□□ -1.12
EPHA4-204ENST00000415749 CST3P01034 146 aaPredicted RBP8.04□□□□□ -1.12
EPHA4-204ENST00000415749 SLBPQ14493 270 aaKnown RBP eCLIP8.04□□□□□ -1.12
EPHA4-204ENST00000415749 SLFN12Q8IYM2 578 aa8.04□□□□□ -1.12
EPHA4-204ENST00000415749 MFSD2AQ8NA29 543 aa8.04□□□□□ -1.12
EPHA4-204ENST00000415749 TPSG1Q9NRR2 321 aa8.04□□□□□ -1.12
EPHA4-204ENST00000415749 DDX56Q9NY93 547 aaKnown RBP8.04□□□□□ -1.12
EPHA4-204ENST00000415749 COL5A2P05997 1499 aaPredicted RBP8.04□□□□□ -1.12
EPHA4-204ENST00000415749 USP19O94966 1318 aa8.03□□□□□ -1.12
EPHA4-204ENST00000415749 ATP10DQ9P241 1426 aa8.03□□□□□ -1.12
EPHA4-204ENST00000415749 POLR3AO14802 1390 aaPredicted RBP8.03□□□□□ -1.12
EPHA4-204ENST00000415749 AATKQ6ZMQ8 1374 aa8.03□□□□□ -1.12
EPHA4-204ENST00000415749 SLC22A31A6NKX4 558 aa8.03□□□□□ -1.12
EPHA4-204ENST00000415749 GIPRP48546 466 aa8.03□□□□□ -1.12
EPHA4-204ENST00000415749 ZNF827Q17R98 1081 aa8.03□□□□□ -1.12
EPHA4-204ENST00000415749 TNNI3KQ59H18 835 aa8.03□□□□□ -1.12
EPHA4-204ENST00000415749 OVOS1Q6IE37 1185 aa8.03□□□□□ -1.12
EPHA4-204ENST00000415749 PRR23CQ6ZRP0 262 aa8.03□□□□□ -1.12
EPHA4-204ENST00000415749 ARMCX6Q7L4S7 300 aa8.03□□□□□ -1.12
EPHA4-204ENST00000415749 LRP10Q7Z4F1 713 aa8.03□□□□□ -1.12
EPHA4-204ENST00000415749 LILRB2Q8N423 598 aa8.03□□□□□ -1.12
EPHA4-204ENST00000415749 ZNF526Q8TF50 670 aaPredicted RBP8.03□□□□□ -1.12
EPHA4-204ENST00000415749 APPBP2Q92624 585 aa8.03□□□□□ -1.12
EPHA4-204ENST00000415749 SHDQ96IW2 340 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms