RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 MPHOSPH6Q99547 160 aaKnown RBP23.98■■□□□ 1.43
PTPRU-203ENST00000415600 CNNM2Q9H8M5 875 aa23.98■■□□□ 1.43
PTPRU-203ENST00000415600 DCDC2CA8MYV0 355 aa23.97■■□□□ 1.43
PTPRU-203ENST00000415600 CST5P28325 142 aaPredicted RBP23.97■■□□□ 1.43
PTPRU-203ENST00000415600 TLE2Q04725 743 aa23.97■■□□□ 1.43
PTPRU-203ENST00000415600 KLHDC9Q8NEP7 349 aa23.97■■□□□ 1.43
PTPRU-203ENST00000415600 RUFY2Q8WXA3 655 aa23.97■■□□□ 1.43
PTPRU-203ENST00000415600 KRT23Q9C075 422 aa23.97■■□□□ 1.43
PTPRU-203ENST00000415600 CYP39A1Q9NYL5 469 aa23.97■■□□□ 1.43
PTPRU-203ENST00000415600 MROH7Q68CQ1 1323 aa23.97■■□□□ 1.43
PTPRU-203ENST00000415600 FRMPD2Q68DX3 1309 aaPredicted RBP23.97■■□□□ 1.43
PTPRU-203ENST00000415600 LOC102724159A0A0B4J2E5 919 aa23.96■■□□□ 1.43
PTPRU-203ENST00000415600 SOX1O00570 391 aaPredicted RBP23.96■■□□□ 1.43
PTPRU-203ENST00000415600 CLTBP09497 229 aa23.96■■□□□ 1.43
PTPRU-203ENST00000415600 SLC16A2P36021 539 aa23.96■■□□□ 1.43
PTPRU-203ENST00000415600 SNAP25P60880 206 aa23.96■■□□□ 1.43
PTPRU-203ENST00000415600 ZNF543Q08ER8 600 aa23.96■■□□□ 1.43
PTPRU-203ENST00000415600 PWP2Q15269 919 aaKnown RBP23.96■■□□□ 1.43
PTPRU-203ENST00000415600 KCNA10Q16322 511 aa23.96■■□□□ 1.43
PTPRU-203ENST00000415600 LENG1Q96BZ8 264 aaPredicted RBP23.96■■□□□ 1.43
PTPRU-203ENST00000415600 LRCH3Q96II8 777 aa23.96■■□□□ 1.43
PTPRU-203ENST00000415600 FGD4Q96M96 766 aa23.96■■□□□ 1.43
PTPRU-203ENST00000415600 KAT14Q9H8E8 782 aa23.96■■□□□ 1.43
PTPRU-203ENST00000415600 GJA9P57773 515 aa23.95■■□□□ 1.43
PTPRU-203ENST00000415600 TNFAIP2Q03169 654 aa23.95■■□□□ 1.43
PTPRU-203ENST00000415600 TTBK2Q6IQ55 1244 aa23.95■■□□□ 1.43
PTPRU-203ENST00000415600 VTI1AQ96AJ9 217 aa23.95■■□□□ 1.43
PTPRU-203ENST00000415600 TOX2Q96NM4 488 aa23.95■■□□□ 1.43
PTPRU-203ENST00000415600 PDLIM7Q9NR12 457 aa23.95■■□□□ 1.43
PTPRU-203ENST00000415600 ELP1O95163 1332 aa23.95■■□□□ 1.43
PTPRU-203ENST00000415600 PQBP1O60828 265 aaKnown RBP23.95■■□□□ 1.42
PTPRU-203ENST00000415600 KDM4AO75164 1064 aa23.95■■□□□ 1.42
PTPRU-203ENST00000415600 NEDD4P46934 1319 aa23.95■■□□□ 1.42
PTPRU-203ENST00000415600 GNASQ5JWF2 1037 aa23.95■■□□□ 1.42
PTPRU-203ENST00000415600 AP5M1Q9H0R1 490 aa23.95■■□□□ 1.42
PTPRU-203ENST00000415600 UPF3AQ9H1J1 476 aaKnown RBP23.95■■□□□ 1.42
PTPRU-203ENST00000415600 SZT2Q5T011 3432 aa23.94■■□□□ 1.42
PTPRU-203ENST00000415600 WDR19Q8NEZ3 1342 aa23.94■■□□□ 1.42
PTPRU-203ENST00000415600 RAD50Q92878 1312 aa23.94■■□□□ 1.42
PTPRU-203ENST00000415600 B4DLN1 442 aa23.94■■□□□ 1.42
PTPRU-203ENST00000415600 ZEB2O60315 1214 aa23.94■■□□□ 1.42
PTPRU-203ENST00000415600 SNHG28P0DPA3 235 aa23.94■■□□□ 1.42
PTPRU-203ENST00000415600 MRPL12P52815 198 aaKnown RBP23.94■■□□□ 1.42
PTPRU-203ENST00000415600 MUM1L1Q5H9M0 696 aa23.94■■□□□ 1.42
PTPRU-203ENST00000415600 RASGRP2Q7LDG7 609 aa23.94■■□□□ 1.42
PTPRU-203ENST00000415600 UBAC1Q9BSL1 405 aa23.94■■□□□ 1.42
PTPRU-203ENST00000415600 LAMA3Q16787 3333 aa23.94■■□□□ 1.42
PTPRU-203ENST00000415600 DNAH12Q6ZR08 3092 aa23.93■■□□□ 1.42
PTPRU-203ENST00000415600 SOWAHBA6NEL2 793 aa23.93■■□□□ 1.42
PTPRU-203ENST00000415600 TTC22Q5TAA0 569 aa23.93■■□□□ 1.42
PTPRU-203ENST00000415600 IQSEC1Q6DN90 963 aa23.93■■□□□ 1.42
PTPRU-203ENST00000415600 ANKRD33Q7Z3H0 272 aa23.93■■□□□ 1.42
PTPRU-203ENST00000415600 ZSCAN10Q96SZ4 725 aaPredicted RBP23.93■■□□□ 1.42
PTPRU-203ENST00000415600 VTA1Q9NP79 307 aa23.93■■□□□ 1.42
PTPRU-203ENST00000415600 PTPDC1A2A3K4 754 aa23.92■■□□□ 1.42
PTPRU-203ENST00000415600 RAG1P15918 1043 aa23.92■■□□□ 1.42
PTPRU-203ENST00000415600 PNMA1Q8ND90 353 aa23.92■■□□□ 1.42
PTPRU-203ENST00000415600 ZKSCAN3Q9BRR0 538 aa23.92■■□□□ 1.42
PTPRU-203ENST00000415600 TMEM39AQ9NV64 488 aa23.92■■□□□ 1.42
PTPRU-203ENST00000415600 CABYRO75952 493 aa23.91■■□□□ 1.42
PTPRU-203ENST00000415600 ASGR1P07306 291 aa23.91■■□□□ 1.42
PTPRU-203ENST00000415600 TRDNQ13061 729 aa23.91■■□□□ 1.42
PTPRU-203ENST00000415600 CCSAPQ6IQ19 270 aaPredicted RBP23.91■■□□□ 1.42
PTPRU-203ENST00000415600 BADQ92934 168 aa23.91■■□□□ 1.42
PTPRU-203ENST00000415600 MAF1Q9H063 256 aa23.91■■□□□ 1.42
PTPRU-203ENST00000415600 KATNBL1Q9H079 304 aa23.91■■□□□ 1.42
PTPRU-203ENST00000415600 A0A0U1RQG5 324 aaPredicted RBP23.91■■□□□ 1.42
PTPRU-203ENST00000415600 B4E1Z4 1266 aa23.91■■□□□ 1.42
PTPRU-203ENST00000415600 KIAA0355O15063 1070 aa23.91■■□□□ 1.42
PTPRU-203ENST00000415600 BAATQ14032 418 aaPredicted RBP23.91■■□□□ 1.42
PTPRU-203ENST00000415600 ASPRV1Q53RT3 343 aa23.91■■□□□ 1.42
PTPRU-203ENST00000415600 RNF207Q6ZRF8 634 aa23.91■■□□□ 1.42
PTPRU-203ENST00000415600 ANKS1AQ92625 1134 aa23.91■■□□□ 1.42
PTPRU-203ENST00000415600 SEZ6LQ9BYH1 1024 aa23.91■■□□□ 1.42
PTPRU-203ENST00000415600 Q9Y3F1 56 aa23.91■■□□□ 1.42
PTPRU-203ENST00000415600 MCM3APO60318 1980 aa23.9■■□□□ 1.42
PTPRU-203ENST00000415600 SEC24BO95487 1268 aa23.9■■□□□ 1.42
PTPRU-203ENST00000415600 NKX3-2P78367 333 aa23.9■■□□□ 1.42
PTPRU-203ENST00000415600 TLK2Q86UE8 772 aa23.9■■□□□ 1.42
PTPRU-203ENST00000415600 DEFB123Q8N688 67 aa23.9■■□□□ 1.42
PTPRU-203ENST00000415600 LAMA4Q16363 1823 aa23.89■■□□□ 1.42
PTPRU-203ENST00000415600 TRIM43BA6NCK2 446 aa23.89■■□□□ 1.41
PTPRU-203ENST00000415600 TLR3O15455 904 aaKnown RBP23.89■■□□□ 1.41
PTPRU-203ENST00000415600 MORC4Q8TE76 937 aa23.89■■□□□ 1.41
PTPRU-203ENST00000415600 TRIM43Q96BQ3 446 aaPredicted RBP23.89■■□□□ 1.41
PTPRU-203ENST00000415600 IPO9Q96P70 1041 aaKnown RBP23.89■■□□□ 1.41
PTPRU-203ENST00000415600 U3KPZ7 1027 aaPredicted RBP23.89■■□□□ 1.41
PTPRU-203ENST00000415600 MYADML2A6NDP7 307 aa23.88■■□□□ 1.41
PTPRU-203ENST00000415600 NFIBO00712 420 aa23.88■■□□□ 1.41
PTPRU-203ENST00000415600 PARP1P09874 1014 aaKnown RBP23.88■■□□□ 1.41
PTPRU-203ENST00000415600 FSCN1Q16658 493 aaKnown RBP23.88■■□□□ 1.41
PTPRU-203ENST00000415600 FBXO16Q8IX29 292 aaPredicted RBP23.88■■□□□ 1.41
PTPRU-203ENST00000415600 ZSWIM5Q9P217 1185 aa23.88■■□□□ 1.41
PTPRU-203ENST00000415600 TNKSO95271 1327 aa23.88■■□□□ 1.41
PTPRU-203ENST00000415600 DHX16O60231 1041 aaKnown RBP23.87■■□□□ 1.41
PTPRU-203ENST00000415600 CALML3P27482 149 aa23.87■■□□□ 1.41
PTPRU-203ENST00000415600 ALDH5A1P51649 535 aaPredicted RBP23.87■■□□□ 1.41
PTPRU-203ENST00000415600 IFIT1BQ5T764 474 aaKnown RBP23.87■■□□□ 1.41
PTPRU-203ENST00000415600 KIAA1211Q6ZU35 1233 aa23.87■■□□□ 1.41
PTPRU-203ENST00000415600 EEPD1Q7L9B9 569 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms