RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 IL25Q9H293 177 aa29.3■■■□□ 2.28
HLA-C-204ENST00000415537 ZSWIM5Q9P217 1185 aa29.3■■■□□ 2.28
HLA-C-204ENST00000415537 A0A1W2PQ45 241 aaPredicted RBP29.29■■■□□ 2.28
HLA-C-204ENST00000415537 A0A1W2PQY0 241 aa29.29■■■□□ 2.28
HLA-C-204ENST00000415537 NUP133Q8WUM0 1156 aa29.29■■■□□ 2.28
HLA-C-204ENST00000415537 PRDM5Q9NQX1 630 aaPredicted RBP29.29■■■□□ 2.28
HLA-C-204ENST00000415537 MOXD2PA6NHM9 499 aa29.28■■■□□ 2.28
HLA-C-204ENST00000415537 C6orf222P0C671 652 aaPredicted RBP29.28■■■□□ 2.28
HLA-C-204ENST00000415537 UBAC1Q9BSL1 405 aa29.28■■■□□ 2.28
HLA-C-204ENST00000415537 GOLGA8HP0CJ92 632 aa29.27■■■□□ 2.28
HLA-C-204ENST00000415537 ACLYP53396 1101 aa29.27■■■□□ 2.28
HLA-C-204ENST00000415537 KCNA10Q16322 511 aa29.27■■■□□ 2.28
HLA-C-204ENST00000415537 NOL8Q76FK4 1167 aaKnown RBP29.27■■■□□ 2.28
HLA-C-204ENST00000415537 PCSK9Q8NBP7 692 aaKnown RBP29.27■■■□□ 2.28
HLA-C-204ENST00000415537 KLHDC9Q8NEP7 349 aa29.27■■■□□ 2.28
HLA-C-204ENST00000415537 STARD7Q9NQZ5 370 aa29.27■■■□□ 2.28
HLA-C-204ENST00000415537 TNKSO95271 1327 aa29.26■■■□□ 2.27
HLA-C-204ENST00000415537 PTPDC1A2A3K4 754 aa29.26■■■□□ 2.27
HLA-C-204ENST00000415537 CHMLP26374 656 aa29.26■■■□□ 2.27
HLA-C-204ENST00000415537 BAATQ14032 418 aaPredicted RBP29.26■■■□□ 2.27
HLA-C-204ENST00000415537 ANKS1AQ92625 1134 aa29.26■■■□□ 2.27
HLA-C-204ENST00000415537 KATNBL1Q9H079 304 aa29.26■■■□□ 2.27
HLA-C-204ENST00000415537 ADD3Q9UEY8 706 aaKnown RBP29.26■■■□□ 2.27
HLA-C-204ENST00000415537 SOX1O00570 391 aaPredicted RBP29.25■■■□□ 2.27
HLA-C-204ENST00000415537 ADCY6O43306 1168 aa29.25■■■□□ 2.27
HLA-C-204ENST00000415537 TNFAIP2Q03169 654 aa29.25■■■□□ 2.27
HLA-C-204ENST00000415537 TLE2Q04725 743 aa29.25■■■□□ 2.27
HLA-C-204ENST00000415537 TRDNQ13061 729 aa29.25■■■□□ 2.27
HLA-C-204ENST00000415537 ENAHQ8N8S7 591 aaPredicted RBP29.25■■■□□ 2.27
HLA-C-204ENST00000415537 LCTP09848 1927 aa29.24■■■□□ 2.27
HLA-C-204ENST00000415537 NFIBO00712 420 aa29.24■■■□□ 2.27
HLA-C-204ENST00000415537 CST5P28325 142 aaPredicted RBP29.24■■■□□ 2.27
HLA-C-204ENST00000415537 GJA9P57773 515 aa29.24■■■□□ 2.27
HLA-C-204ENST00000415537 LRCH3Q96II8 777 aa29.24■■■□□ 2.27
HLA-C-204ENST00000415537 UBA5Q9GZZ9 404 aa29.24■■■□□ 2.27
HLA-C-204ENST00000415537 LTBP2Q14767 1821 aa29.24■■■□□ 2.27
HLA-C-204ENST00000415537 ASTN1O14525 1302 aa29.23■■■□□ 2.27
HLA-C-204ENST00000415537 WDR19Q8NEZ3 1342 aa29.23■■■□□ 2.27
HLA-C-204ENST00000415537 MYADML2A6NDP7 307 aa29.23■■■□□ 2.27
HLA-C-204ENST00000415537 LRIT3Q3SXY7 679 aa29.23■■■□□ 2.27
HLA-C-204ENST00000415537 GNASQ5JWF2 1037 aa29.23■■■□□ 2.27
HLA-C-204ENST00000415537 EEPD1Q7L9B9 569 aa29.23■■■□□ 2.27
HLA-C-204ENST00000415537 VTI1AQ96AJ9 217 aa29.23■■■□□ 2.27
HLA-C-204ENST00000415537 GLT1D1Q96MS3 346 aa29.23■■■□□ 2.27
HLA-C-204ENST00000415537 UPF3AQ9H1J1 476 aaKnown RBP29.23■■■□□ 2.27
HLA-C-204ENST00000415537 PDLIM7Q9NR12 457 aa29.23■■■□□ 2.27
HLA-C-204ENST00000415537 U3KPZ7 1027 aaPredicted RBP29.23■■■□□ 2.27
HLA-C-204ENST00000415537 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.22■■■□□ 2.27
HLA-C-204ENST00000415537 PQBP1O60828 265 aaKnown RBP29.22■■■□□ 2.27
HLA-C-204ENST00000415537 ASGR1P07306 291 aa29.22■■■□□ 2.27
HLA-C-204ENST00000415537 ASPRV1Q53RT3 343 aa29.22■■■□□ 2.27
HLA-C-204ENST00000415537 IFIT1BQ5T764 474 aaKnown RBP29.22■■■□□ 2.27
HLA-C-204ENST00000415537 CCSAPQ6IQ19 270 aaPredicted RBP29.22■■■□□ 2.27
HLA-C-204ENST00000415537 RNF207Q6ZRF8 634 aa29.22■■■□□ 2.27
HLA-C-204ENST00000415537 PURBQ96QR8 312 aaKnown RBP29.22■■■□□ 2.27
HLA-C-204ENST00000415537 MYH6P13533 1939 aa29.22■■■□□ 2.27
HLA-C-204ENST00000415537 SZT2Q5T011 3432 aa29.21■■■□□ 2.27
HLA-C-204ENST00000415537 LRRC37A2A6NM11 1700 aa29.21■■■□□ 2.27
HLA-C-204ENST00000415537 CLTBP09497 229 aa29.21■■■□□ 2.27
HLA-C-204ENST00000415537 PARP1P09874 1014 aaKnown RBP29.21■■■□□ 2.27
HLA-C-204ENST00000415537 CALML3P27482 149 aa29.21■■■□□ 2.27
HLA-C-204ENST00000415537 USH1GQ495M9 461 aa29.21■■■□□ 2.27
HLA-C-204ENST00000415537 FBXO16Q8IX29 292 aaPredicted RBP29.21■■■□□ 2.27
HLA-C-204ENST00000415537 CLEC4DQ8WXI8 215 aa29.21■■■□□ 2.27
HLA-C-204ENST00000415537 CPVLQ9H3G5 476 aa29.21■■■□□ 2.27
HLA-C-204ENST00000415537 ALDH5A1P51649 535 aaPredicted RBP29.2■■■□□ 2.26
HLA-C-204ENST00000415537 IRX5P78411 483 aaPredicted RBP29.2■■■□□ 2.26
HLA-C-204ENST00000415537 PTH1RQ03431 593 aa29.2■■■□□ 2.26
HLA-C-204ENST00000415537 IQSEC1Q6DN90 963 aa29.2■■■□□ 2.26
HLA-C-204ENST00000415537 SH3RF1Q7Z6J0 888 aa29.2■■■□□ 2.26
HLA-C-204ENST00000415537 MPHOSPH6Q99547 160 aaKnown RBP29.2■■■□□ 2.26
HLA-C-204ENST00000415537 AP5M1Q9H0R1 490 aa29.2■■■□□ 2.26
HLA-C-204ENST00000415537 VTA1Q9NP79 307 aa29.2■■■□□ 2.26
HLA-C-204ENST00000415537 DDX49Q9Y6V7 483 aaKnown RBP29.2■■■□□ 2.26
HLA-C-204ENST00000415537 ELP1O95163 1332 aa29.2■■■□□ 2.26
HLA-C-204ENST00000415537 LOC102724159A0A0B4J2E5 919 aa29.19■■■□□ 2.26
HLA-C-204ENST00000415537 TRIM43BA6NCK2 446 aa29.19■■■□□ 2.26
HLA-C-204ENST00000415537 DCDC2CA8MYV0 355 aa29.19■■■□□ 2.26
HLA-C-204ENST00000415537 DHX16O60231 1041 aaKnown RBP29.19■■■□□ 2.26
HLA-C-204ENST00000415537 PWP2Q15269 919 aaKnown RBP29.19■■■□□ 2.26
HLA-C-204ENST00000415537 CDC37Q16543 378 aaPredicted RBP29.19■■■□□ 2.26
HLA-C-204ENST00000415537 SLC30A10Q6XR72 485 aa29.19■■■□□ 2.26
HLA-C-204ENST00000415537 TLK2Q86UE8 772 aa29.19■■■□□ 2.26
HLA-C-204ENST00000415537 ADGRF4Q8IZF3 695 aa29.19■■■□□ 2.26
HLA-C-204ENST00000415537 MORC4Q8TE76 937 aa29.19■■■□□ 2.26
HLA-C-204ENST00000415537 BADQ92934 168 aa29.19■■■□□ 2.26
HLA-C-204ENST00000415537 TRIM43Q96BQ3 446 aaPredicted RBP29.19■■■□□ 2.26
HLA-C-204ENST00000415537 PDGFCQ9NRA1 345 aa29.19■■■□□ 2.26
HLA-C-204ENST00000415537 SGSM2O43147 1006 aa29.18■■■□□ 2.26
HLA-C-204ENST00000415537 CYP21A2P08686 494 aa29.18■■■□□ 2.26
HLA-C-204ENST00000415537 TAPT1Q6NXT6 567 aa29.18■■■□□ 2.26
HLA-C-204ENST00000415537 KIAA1211Q6ZU35 1233 aa29.18■■■□□ 2.26
HLA-C-204ENST00000415537 TOX2Q96NM4 488 aa29.18■■■□□ 2.26
HLA-C-204ENST00000415537 GNEQ9Y223 722 aaKnown RBP29.18■■■□□ 2.26
HLA-C-204ENST00000415537 MROH7Q68CQ1 1323 aa29.18■■■□□ 2.26
HLA-C-204ENST00000415537 SMPD1P17405 629 aa29.17■■■□□ 2.26
HLA-C-204ENST00000415537 RPS6P62753 249 aaKnown RBP29.17■■■□□ 2.26
HLA-C-204ENST00000415537 BEX3Q00994 111 aa29.17■■■□□ 2.26
HLA-C-204ENST00000415537 CYB5R4Q7L1T6 521 aa29.17■■■□□ 2.26
HLA-C-204ENST00000415537 ANKRD33Q7Z3H0 272 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms