RNA–Protein interactions for RNA: ENST00000415430.7

VSIG1-202, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VSIG1, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-202ENST00000415430 SMIM24O75264 130 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 SASH3O75995 380 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 BMP2KLQ5H9B9 411 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 THOC7Q6I9Y2 204 aaKnown RBP9.46□□□□□ -0.89
VSIG1-202ENST00000415430 MIS18BP1Q6P0N0 1132 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 KIF6Q6ZMV9 814 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 C14orf80Q86SX3 495 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 PI4K2BQ8TCG2 481 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 ZCWPW1Q9H0M4 648 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 LUC7LQ9NQ29 371 aaKnown RBP9.46□□□□□ -0.89
VSIG1-202ENST00000415430 TUBGCP4Q9UGJ1 667 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 PCDHB8Q9UN66 801 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 ATP6V0A2Q9Y487 856 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 PCDHB13Q9Y5F0 798 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 PDLIM1O00151 329 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 P4HA2O15460 535 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 HCLS1P14317 486 aaPredicted RBP9.46□□□□□ -0.89
VSIG1-202ENST00000415430 COBLL1Q53SF7 1204 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 EPHA10Q5JZY3 1008 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 CCSAPQ6IQ19 270 aaPredicted RBP9.46□□□□□ -0.89
VSIG1-202ENST00000415430 TLDC1Q6P9B6 456 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 SLC7A5P1Q8MH63 180 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 SSX2IPQ9Y2D8 614 aa9.46□□□□□ -0.89
VSIG1-202ENST00000415430 MTRF1O75570 445 aaKnown RBP9.46□□□□□ -0.9
VSIG1-202ENST00000415430 MCM3P25205 808 aa9.46□□□□□ -0.9
VSIG1-202ENST00000415430 SLC8A1P32418 973 aa9.46□□□□□ -0.9
VSIG1-202ENST00000415430 SNCBQ16143 134 aa9.46□□□□□ -0.9
VSIG1-202ENST00000415430 SUSD4Q5VX71 490 aa9.46□□□□□ -0.9
VSIG1-202ENST00000415430 FAM117BQ6P1L5 589 aa9.46□□□□□ -0.9
VSIG1-202ENST00000415430 DCLK2Q8N568 766 aa9.46□□□□□ -0.9
VSIG1-202ENST00000415430 NEUROD6Q96NK8 337 aa9.46□□□□□ -0.9
VSIG1-202ENST00000415430 SLC39A2Q9NP94 309 aa9.46□□□□□ -0.9
VSIG1-202ENST00000415430 AASDHPPTQ9NRN7 309 aa9.46□□□□□ -0.9
VSIG1-202ENST00000415430 HOXC10Q9NYD6 342 aa9.46□□□□□ -0.9
VSIG1-202ENST00000415430 ORC3Q9UBD5 711 aaPredicted RBP9.46□□□□□ -0.9
VSIG1-202ENST00000415430 BZW2Q9Y6E2 419 aaKnown RBP9.46□□□□□ -0.9
VSIG1-202ENST00000415430 RLFQ13129 1914 aa9.46□□□□□ -0.9
VSIG1-202ENST00000415430 ZNF236Q9UL36 1845 aa9.45□□□□□ -0.9
VSIG1-202ENST00000415430 ZSCAN12O43309 604 aa9.45□□□□□ -0.9
VSIG1-202ENST00000415430 ANXA1P04083 346 aa9.45□□□□□ -0.9
VSIG1-202ENST00000415430 CNNM3Q8NE01 707 aa9.45□□□□□ -0.9
VSIG1-202ENST00000415430 RILPL2Q969X0 211 aa9.45□□□□□ -0.9
VSIG1-202ENST00000415430 HOOK2Q96ED9 719 aa9.45□□□□□ -0.9
VSIG1-202ENST00000415430 CHAMP1Q96JM3 812 aa9.45□□□□□ -0.9
VSIG1-202ENST00000415430 H3BQF6 201 aa9.45□□□□□ -0.9
VSIG1-202ENST00000415430 KDM1AO60341 852 aa9.45□□□□□ -0.9
VSIG1-202ENST00000415430 PPP1R42Q7Z4L9 355 aa9.45□□□□□ -0.9
VSIG1-202ENST00000415430 FBXL16Q8N461 479 aa9.45□□□□□ -0.9
VSIG1-202ENST00000415430 ZFAND2BQ8WV99 257 aa9.45□□□□□ -0.9
VSIG1-202ENST00000415430 DHTKD1Q96HY7 919 aaPredicted RBP9.45□□□□□ -0.9
VSIG1-202ENST00000415430 MRIQ9BWK5 157 aa9.45□□□□□ -0.9
VSIG1-202ENST00000415430 BICC1Q9H694 974 aaKnown RBP9.45□□□□□ -0.9
VSIG1-202ENST00000415430 SYNCQ9H7C4 482 aa9.45□□□□□ -0.9
VSIG1-202ENST00000415430 KIAA1468Q9P260 1216 aa9.45□□□□□ -0.9
VSIG1-202ENST00000415430 TMCC3Q9ULS5 477 aa9.45□□□□□ -0.9
VSIG1-202ENST00000415430 LINC00854A0A1B0GVQ3 168 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 TMEM221A6NGB7 291 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 TBCAO75347 108 aaKnown RBP9.44□□□□□ -0.9
VSIG1-202ENST00000415430 PPP4CP60510 307 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 LRMPQ12912 555 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 CBX3Q13185 183 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 DYNC1I2Q13409 638 aaKnown RBP9.44□□□□□ -0.9
VSIG1-202ENST00000415430 KANK3Q6NY19 840 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 LMNTD2Q8IXW0 634 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 ANKK1Q8NFD2 765 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 SPAG5Q96R06 1193 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.44□□□□□ -0.9
VSIG1-202ENST00000415430 CFAP45Q9UL16 551 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 PTGER2P43116 358 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 CCT5P48643 541 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 BTG3Q14201 252 aaPredicted RBP9.44□□□□□ -0.9
VSIG1-202ENST00000415430 PPP2R5BQ15173 497 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 BICDL1Q6ZP65 573 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 COL23A1Q86Y22 540 aaPredicted RBP9.44□□□□□ -0.9
VSIG1-202ENST00000415430 GALNT15Q8N3T1 639 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 DHX36Q9H2U1 1008 aaKnown RBP9.44□□□□□ -0.9
VSIG1-202ENST00000415430 GALNT8Q9NY28 637 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 CORO1CQ9ULV4 474 aaPredicted RBP9.44□□□□□ -0.9
VSIG1-202ENST00000415430 ROBO3Q96MS0 1386 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 SH3TC1Q8TE82 1336 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 PNMA6EA0A0J9YXQ4 647 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 CCDC159P0C7I6 412 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 ERCC5P28715 1186 aaPredicted RBP9.44□□□□□ -0.9
VSIG1-202ENST00000415430 CCDC158Q5M9N0 1113 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 FKBP15Q5T1M5 1219 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 TBC1D9BQ66K14 1250 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 SPATS2Q86XZ4 545 aaKnown RBP9.44□□□□□ -0.9
VSIG1-202ENST00000415430 MYO1AQ9UBC5 1043 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 ITGB1BP2Q9UKP3 347 aa9.44□□□□□ -0.9
VSIG1-202ENST00000415430 NSFL1CQ9UNZ2 370 aaKnown RBP9.44□□□□□ -0.9
VSIG1-202ENST00000415430 RTCBQ9Y3I0 505 aaKnown RBP9.44□□□□□ -0.9
VSIG1-202ENST00000415430 GSPT1P15170 499 aaKnown RBP9.43□□□□□ -0.9
VSIG1-202ENST00000415430 KCNA3P22001 575 aa9.43□□□□□ -0.9
VSIG1-202ENST00000415430 USP11P51784 963 aa9.43□□□□□ -0.9
VSIG1-202ENST00000415430 INHBCP55103 352 aa9.43□□□□□ -0.9
VSIG1-202ENST00000415430 ITIH3Q06033 890 aa9.43□□□□□ -0.9
VSIG1-202ENST00000415430 ZNF280CQ8ND82 737 aa9.43□□□□□ -0.9
VSIG1-202ENST00000415430 PAGR1Q9BTK6 254 aa9.43□□□□□ -0.9
VSIG1-202ENST00000415430 BRIP1Q9BX63 1249 aa9.43□□□□□ -0.9
VSIG1-202ENST00000415430 ALDH8A1Q9H2A2 487 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms