RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 SRGNP10124 158 aa16.77■□□□□ 0.28
TTC39A-208ENST00000413473 NAPAP54920 295 aa16.77■□□□□ 0.28
TTC39A-208ENST00000413473 HNRNPH2P55795 449 aaKnown RBP16.77■□□□□ 0.28
TTC39A-208ENST00000413473 HERVK_113P62684 666 aa16.77■□□□□ 0.28
TTC39A-208ENST00000413473 PDE4DQ08499 809 aa16.77■□□□□ 0.28
TTC39A-208ENST00000413473 STK4Q13043 487 aa16.77■□□□□ 0.28
TTC39A-208ENST00000413473 FAM98CQ17RN3 349 aaKnown RBP16.77■□□□□ 0.28
TTC39A-208ENST00000413473 ZMYND12Q9H0C1 365 aa16.77■□□□□ 0.28
TTC39A-208ENST00000413473 HDAC6Q9UBN7 1215 aa16.77■□□□□ 0.28
TTC39A-208ENST00000413473 FLT1P17948 1338 aa16.77■□□□□ 0.28
TTC39A-208ENST00000413473 NRAPQ86VF7 1730 aa16.77■□□□□ 0.28
TTC39A-208ENST00000413473 GNPATO15228 680 aa16.77■□□□□ 0.28
TTC39A-208ENST00000413473 PPP4CP60510 307 aa16.77■□□□□ 0.28
TTC39A-208ENST00000413473 TBC1D8BQ0IIM8 1120 aa16.77■□□□□ 0.28
TTC39A-208ENST00000413473 CCDC122Q5T0U0 273 aa16.77■□□□□ 0.28
TTC39A-208ENST00000413473 ANKRD40Q6AI12 368 aa16.77■□□□□ 0.28
TTC39A-208ENST00000413473 TRIM9Q9C026 710 aa16.77■□□□□ 0.28
TTC39A-208ENST00000413473 EXOC1Q9NV70 894 aa16.77■□□□□ 0.28
TTC39A-208ENST00000413473 ADAM21Q9UKJ8 722 aa16.77■□□□□ 0.28
TTC39A-208ENST00000413473 ROBO3Q96MS0 1386 aa16.77■□□□□ 0.27
TTC39A-208ENST00000413473 SMCO2A6NFE2 343 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 PSMD14O00487 310 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 OR52Z1P0C646 297 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 TRIM21P19474 475 aaKnown RBP16.76■□□□□ 0.27
TTC39A-208ENST00000413473 KLK7P49862 253 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 TRAPPC11Q7Z392 1133 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 NOC3LQ8WTT2 800 aaKnown RBP16.76■□□□□ 0.27
TTC39A-208ENST00000413473 P2RX5Q93086 422 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 AK8Q96MA6 479 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 LZTS2Q9BRK4 669 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 RASSF10A6NK89 507 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 CCNE1P24864 410 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 GSTO1P78417 241 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 GPS2Q13227 327 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 SEMA3FQ13275 785 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 NONOQ15233 471 aaKnown RBP eCLIP16.76■□□□□ 0.27
TTC39A-208ENST00000413473 GPR101Q96P66 508 aaPredicted RBP16.76■□□□□ 0.27
TTC39A-208ENST00000413473 CUEDC2Q9H467 287 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 AHDC1Q5TGY3 1603 aaPredicted RBP16.76■□□□□ 0.27
TTC39A-208ENST00000413473 FCER1AP12319 257 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 TECP42680 631 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 ASIC1P78348 528 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 NFIXQ14938 502 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 MEA1Q16626 185 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 USP17L2Q6R6M4 530 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 CCDC47Q96A33 483 aaKnown RBP16.76■□□□□ 0.27
TTC39A-208ENST00000413473 TTYH3Q9C0H2 523 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 VAT1LQ9HCJ6 419 aa16.76■□□□□ 0.27
TTC39A-208ENST00000413473 MAST2Q6P0Q8 1798 aa16.75■□□□□ 0.27
TTC39A-208ENST00000413473 ATP1A1P05023 1023 aaKnown RBP16.75■□□□□ 0.27
TTC39A-208ENST00000413473 KRT83P78385 493 aa16.75■□□□□ 0.27
TTC39A-208ENST00000413473 RC3H1Q5TC82 1133 aaKnown RBP16.75■□□□□ 0.27
TTC39A-208ENST00000413473 KRT25Q7Z3Z0 450 aa16.75■□□□□ 0.27
TTC39A-208ENST00000413473 KIAA1328Q86T90 577 aa16.75■□□□□ 0.27
TTC39A-208ENST00000413473 AMIGO3Q86WK7 504 aa16.75■□□□□ 0.27
TTC39A-208ENST00000413473 TXLNBQ8N3L3 684 aa16.75■□□□□ 0.27
TTC39A-208ENST00000413473 CNOT6LQ96LI5 555 aaKnown RBP16.75■□□□□ 0.27
TTC39A-208ENST00000413473 SPZ1Q9BXG8 430 aa16.75■□□□□ 0.27
TTC39A-208ENST00000413473 PCMTD1Q96MG8 357 aaPredicted RBP16.75■□□□□ 0.27
TTC39A-208ENST00000413473 EYA3Q99504 573 aa16.75■□□□□ 0.27
TTC39A-208ENST00000413473 C7orf25Q9BPX7 421 aa16.75■□□□□ 0.27
TTC39A-208ENST00000413473 MAGEF1Q9HAY2 307 aa16.75■□□□□ 0.27
TTC39A-208ENST00000413473 C6orf50Q9HD87 102 aa16.75■□□□□ 0.27
TTC39A-208ENST00000413473 BICDL2A1A5D9 508 aa16.74■□□□□ 0.27
TTC39A-208ENST00000413473 SRGAP2O75044 1071 aa16.74■□□□□ 0.27
TTC39A-208ENST00000413473 LDHCP07864 332 aa16.74■□□□□ 0.27
TTC39A-208ENST00000413473 MTIF2P46199 727 aaKnown RBP16.74■□□□□ 0.27
TTC39A-208ENST00000413473 CDK8P49336 464 aa16.74■□□□□ 0.27
TTC39A-208ENST00000413473 HPS3Q969F9 1004 aa16.74■□□□□ 0.27
TTC39A-208ENST00000413473 NUP58Q9BVL2 599 aa16.74■□□□□ 0.27
TTC39A-208ENST00000413473 LACRTQ9GZZ8 138 aa16.74■□□□□ 0.27
TTC39A-208ENST00000413473 GBP3Q9H0R5 595 aa16.74■□□□□ 0.27
TTC39A-208ENST00000413473 ZNHIT6Q9NWK9 470 aaKnown RBP16.74■□□□□ 0.27
TTC39A-208ENST00000413473 LEMD3Q9Y2U8 911 aa16.74■□□□□ 0.27
TTC39A-208ENST00000413473 SAR1BQ9Y6B6 198 aa16.74■□□□□ 0.27
TTC39A-208ENST00000413473 RCCD1A6NED2 376 aa16.74■□□□□ 0.27
TTC39A-208ENST00000413473 ZBTB22O15209 634 aa16.74■□□□□ 0.27
TTC39A-208ENST00000413473 NKRFO15226 690 aaKnown RBP eCLIP16.74■□□□□ 0.27
TTC39A-208ENST00000413473 N4BP1O75113 896 aaKnown RBP16.74■□□□□ 0.27
TTC39A-208ENST00000413473 GNA11P29992 359 aa16.74■□□□□ 0.27
TTC39A-208ENST00000413473 CYLC1P35663 651 aaPredicted RBP16.74■□□□□ 0.27
TTC39A-208ENST00000413473 CASP8Q14790 479 aa16.74■□□□□ 0.27
TTC39A-208ENST00000413473 NEK8Q86SG6 692 aa16.74■□□□□ 0.27
TTC39A-208ENST00000413473 ARHGEF1Q92888 912 aaKnown RBP16.74■□□□□ 0.27
TTC39A-208ENST00000413473 NOC4LQ9BVI4 516 aaKnown RBP16.74■□□□□ 0.27
TTC39A-208ENST00000413473 NHEJ1Q9H9Q4 299 aaPredicted RBP16.74■□□□□ 0.27
TTC39A-208ENST00000413473 TUBBP07437 444 aa16.73■□□□□ 0.27
TTC39A-208ENST00000413473 ZBED6P86452 979 aa16.73■□□□□ 0.27
TTC39A-208ENST00000413473 RETREG2Q8NC44 543 aa16.73■□□□□ 0.27
TTC39A-208ENST00000413473 TBCKQ8TEA7 893 aa16.73■□□□□ 0.27
TTC39A-208ENST00000413473 EXOC4Q96A65 974 aa16.73■□□□□ 0.27
TTC39A-208ENST00000413473 JAKMIP2Q96AA8 810 aa16.73■□□□□ 0.27
TTC39A-208ENST00000413473 RRP36Q96EU6 259 aaKnown RBP16.73■□□□□ 0.27
TTC39A-208ENST00000413473 MMS19Q96T76 1030 aa16.73■□□□□ 0.27
TTC39A-208ENST00000413473 MMTAG2Q9BU76 263 aaKnown RBP16.73■□□□□ 0.27
TTC39A-208ENST00000413473 RTFDC1Q9BY42 306 aaPredicted RBP16.73■□□□□ 0.27
TTC39A-208ENST00000413473 ZNF287Q9HBT7 754 aa16.73■□□□□ 0.27
TTC39A-208ENST00000413473 VPS18Q9P253 973 aa16.73■□□□□ 0.27
TTC39A-208ENST00000413473 BIN2Q9UBW5 565 aaPredicted RBP16.73■□□□□ 0.27
TTC39A-208ENST00000413473 KRT86O43790 486 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms