RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 JADE2Q9NQC1 790 aa19.67■□□□□ 0.74
SDCBP-202ENST00000413219 FAM205AQ6ZU69 1335 aa19.67■□□□□ 0.74
SDCBP-202ENST00000413219 BAZ2AQ9UIF9 1905 aaKnown RBP19.67■□□□□ 0.74
SDCBP-202ENST00000413219 A0A087WUV0 522 aaPredicted RBP19.67■□□□□ 0.74
SDCBP-202ENST00000413219 GOLGA8KD6RF30 607 aa19.67■□□□□ 0.74
SDCBP-202ENST00000413219 M0R2N6 131 aa19.67■□□□□ 0.74
SDCBP-202ENST00000413219 TACC1O75410 805 aa19.67■□□□□ 0.74
SDCBP-202ENST00000413219 UBE4AQ14139 1066 aa19.67■□□□□ 0.74
SDCBP-202ENST00000413219 COBLL1Q53SF7 1204 aa19.67■□□□□ 0.74
SDCBP-202ENST00000413219 PACS2Q86VP3 889 aa19.67■□□□□ 0.74
SDCBP-202ENST00000413219 CREG2Q8IUH2 290 aa19.67■□□□□ 0.74
SDCBP-202ENST00000413219 RASSF8Q8NHQ8 419 aa19.67■□□□□ 0.74
SDCBP-202ENST00000413219 RIN2Q8WYP3 895 aaPredicted RBP19.67■□□□□ 0.74
SDCBP-202ENST00000413219 CNOT6LQ96LI5 555 aaKnown RBP19.67■□□□□ 0.74
SDCBP-202ENST00000413219 ZNF185O15231 689 aa19.66■□□□□ 0.74
SDCBP-202ENST00000413219 VEGFAP15692 232 aaPredicted RBP19.66■□□□□ 0.74
SDCBP-202ENST00000413219 SH3GL2Q99962 352 aa19.66■□□□□ 0.74
SDCBP-202ENST00000413219 A0A1B0GUL6 1792 aa19.66■□□□□ 0.74
SDCBP-202ENST00000413219 CCDC194A0A1B0GVG4 234 aa19.66■□□□□ 0.74
SDCBP-202ENST00000413219 ZMYND10O75800 440 aa19.66■□□□□ 0.74
SDCBP-202ENST00000413219 C2orf54Q08AI8 447 aa19.66■□□□□ 0.74
SDCBP-202ENST00000413219 ICE2Q659A1 982 aa19.66■□□□□ 0.74
SDCBP-202ENST00000413219 CCDC42Q96M95 316 aa19.66■□□□□ 0.74
SDCBP-202ENST00000413219 AK8Q96MA6 479 aa19.66■□□□□ 0.74
SDCBP-202ENST00000413219 MACROD2A1Z1Q3 448 aa19.65■□□□□ 0.74
SDCBP-202ENST00000413219 A6NNZ2 444 aa19.65■□□□□ 0.74
SDCBP-202ENST00000413219 MTIF2P46199 727 aaKnown RBP19.65■□□□□ 0.74
SDCBP-202ENST00000413219 IRAK1P51617 712 aa19.65■□□□□ 0.74
SDCBP-202ENST00000413219 TUBB8Q3ZCM7 444 aa19.65■□□□□ 0.74
SDCBP-202ENST00000413219 SBK1Q52WX2 424 aa19.65■□□□□ 0.74
SDCBP-202ENST00000413219 MIIPQ5JXC2 388 aa19.65■□□□□ 0.74
SDCBP-202ENST00000413219 FKBP15Q5T1M5 1219 aa19.65■□□□□ 0.74
SDCBP-202ENST00000413219 GSPT2Q8IYD1 628 aaKnown RBP19.65■□□□□ 0.74
SDCBP-202ENST00000413219 SH2D4AQ9H788 454 aa19.65■□□□□ 0.74
SDCBP-202ENST00000413219 ATP8A2Q9NTI2 1148 aa19.65■□□□□ 0.74
SDCBP-202ENST00000413219 PHLPP1O60346 1717 aa19.65■□□□□ 0.74
SDCBP-202ENST00000413219 LAMB1P07942 1786 aa19.65■□□□□ 0.74
SDCBP-202ENST00000413219 OPA1O60313 960 aa19.64■□□□□ 0.74
SDCBP-202ENST00000413219 NMT2O60551 498 aa19.64■□□□□ 0.74
SDCBP-202ENST00000413219 LCA5LO95447 670 aa19.64■□□□□ 0.74
SDCBP-202ENST00000413219 NTSR2O95665 410 aa19.64■□□□□ 0.74
SDCBP-202ENST00000413219 EPB41P11171 864 aaKnown RBP19.64■□□□□ 0.74
SDCBP-202ENST00000413219 TCP1P17987 556 aaKnown RBP19.64■□□□□ 0.74
SDCBP-202ENST00000413219 TNFRSF8P28908 595 aa19.64■□□□□ 0.74
SDCBP-202ENST00000413219 GYG1P46976 350 aa19.64■□□□□ 0.74
SDCBP-202ENST00000413219 MAPK8IP2Q13387 824 aaPredicted RBP19.64■□□□□ 0.74
SDCBP-202ENST00000413219 TADA2BQ86TJ2 420 aa19.64■□□□□ 0.74
SDCBP-202ENST00000413219 NOC4LQ9BVI4 516 aaKnown RBP19.64■□□□□ 0.74
SDCBP-202ENST00000413219 CRNKL1Q9BZJ0 848 aaKnown RBP19.64■□□□□ 0.74
SDCBP-202ENST00000413219 TMEM60Q9H2L4 133 aa19.64■□□□□ 0.74
SDCBP-202ENST00000413219 KAT14Q9H8E8 782 aa19.64■□□□□ 0.74
SDCBP-202ENST00000413219 PLAGL2Q9UPG8 496 aa19.64■□□□□ 0.74
SDCBP-202ENST00000413219 DUSP10Q9Y6W6 482 aa19.64■□□□□ 0.74
SDCBP-202ENST00000413219 GNAQP50148 359 aa19.64■□□□□ 0.73
SDCBP-202ENST00000413219 CAVIN4Q5BKX8 364 aa19.64■□□□□ 0.73
SDCBP-202ENST00000413219 ALS2CLQ60I27 953 aa19.64■□□□□ 0.73
SDCBP-202ENST00000413219 RCSD1Q6JBY9 416 aa19.64■□□□□ 0.73
SDCBP-202ENST00000413219 EMBQ6PCB8 327 aa19.64■□□□□ 0.73
SDCBP-202ENST00000413219 ZNF384Q8TF68 577 aa19.64■□□□□ 0.73
SDCBP-202ENST00000413219 PCMTD1Q96MG8 357 aaPredicted RBP19.64■□□□□ 0.73
SDCBP-202ENST00000413219 C7orf25Q9BPX7 421 aa19.64■□□□□ 0.73
SDCBP-202ENST00000413219 ARPP21Q9UBL0 812 aaPredicted RBP19.64■□□□□ 0.73
SDCBP-202ENST00000413219 LRWD1Q9UFC0 647 aa19.64■□□□□ 0.73
SDCBP-202ENST00000413219 PP2D1A8MPX8 630 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 ZNF263O14978 683 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 KLK7P49862 253 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 EPHB4P54760 987 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 CYP27A1Q02318 531 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 FAM47AQ5JRC9 791 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 ANKRD40Q6AI12 368 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 GDAP1L1Q96MZ0 367 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 DCP1AQ9NPI6 582 aaPredicted RBP19.63■□□□□ 0.73
SDCBP-202ENST00000413219 HYOU1Q9Y4L1 999 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 CLSTN1O94985 981 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 CCDC96Q2M329 555 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 SND1Q7KZF4 910 aaKnown RBP eCLIP19.63■□□□□ 0.733e-10■■■□□ 16.4
SDCBP-202ENST00000413219 CCDC155Q8N6L0 562 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 SPATA4Q8NEY3 305 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 ANKS1AQ92625 1134 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 CAPS2Q9BXY5 557 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 IFIH1Q9BYX4 1025 aaKnown RBP19.63■□□□□ 0.73
SDCBP-202ENST00000413219 TRIM9Q9C026 710 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 PLEKHA4Q9H4M7 779 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 PCDHA6Q9UN73 950 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 PCDHA8Q9Y5H6 950 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 PCDHA13Q9Y5I0 950 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 SCN7AQ01118 1682 aa19.63■□□□□ 0.73
SDCBP-202ENST00000413219 FLT1P17948 1338 aa19.62■□□□□ 0.73
SDCBP-202ENST00000413219 CAMTA2O94983 1202 aa19.62■□□□□ 0.73
SDCBP-202ENST00000413219 PDE4DQ08499 809 aa19.62■□□□□ 0.73
SDCBP-202ENST00000413219 NNTQ13423 1086 aa19.62■□□□□ 0.73
SDCBP-202ENST00000413219 DGKHQ86XP1 1220 aa19.62■□□□□ 0.73
SDCBP-202ENST00000413219 CAVIN3Q969G5 261 aa19.62■□□□□ 0.73
SDCBP-202ENST00000413219 ALS2CR12Q96Q35 445 aa19.62■□□□□ 0.73
SDCBP-202ENST00000413219 ABCB11O95342 1321 aa19.62■□□□□ 0.73
SDCBP-202ENST00000413219 TSPY2A6NKD2 308 aa19.61■□□□□ 0.73
SDCBP-202ENST00000413219 EBAG9O00559 213 aa19.61■□□□□ 0.73
SDCBP-202ENST00000413219 EIF3HO15372 352 aaKnown RBP eCLIP19.61■□□□□ 0.73
SDCBP-202ENST00000413219 CABP7Q86V35 215 aa19.61■□□□□ 0.73
SDCBP-202ENST00000413219 RASGRP4Q8TDF6 673 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms