RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 USP17L19D6RCP7 530 aa8.95□□□□□ -0.98
CPSF7-203ENST00000413184 USP17L20D6RJB6 530 aa8.95□□□□□ -0.98
CPSF7-203ENST00000413184 J3QKU1 62 aa8.95□□□□□ -0.98
CPSF7-203ENST00000413184 TBC1D12O60347 775 aa8.95□□□□□ -0.98
CPSF7-203ENST00000413184 CABYRO75952 493 aa8.95□□□□□ -0.98
CPSF7-203ENST00000413184 IQCF3P0C7M6 154 aa8.95□□□□□ -0.98
CPSF7-203ENST00000413184 SUPT20HL2P0C7V6 817 aa8.95□□□□□ -0.98
CPSF7-203ENST00000413184 RIPPLY3P57055 190 aa8.95□□□□□ -0.98
CPSF7-203ENST00000413184 SPEM2Q0P670 501 aa8.95□□□□□ -0.98
CPSF7-203ENST00000413184 USP17L24Q0WX57 530 aa8.95□□□□□ -0.98
CPSF7-203ENST00000413184 COL28A1Q2UY09 1125 aa8.95□□□□□ -0.98
CPSF7-203ENST00000413184 TMEM192Q8IY95 271 aa8.95□□□□□ -0.98
CPSF7-203ENST00000413184 PPP2R3CQ969Q6 453 aa8.95□□□□□ -0.98
CPSF7-203ENST00000413184 BORCS6Q96GS4 357 aa8.95□□□□□ -0.98
CPSF7-203ENST00000413184 BARX2Q9UMQ3 279 aaPredicted RBP8.95□□□□□ -0.98
CPSF7-203ENST00000413184 GPSM3Q9Y4H4 160 aa8.95□□□□□ -0.98
CPSF7-203ENST00000413184 AKAP13Q12802 2813 aa8.95□□□□□ -0.98
CPSF7-203ENST00000413184 SPINK2P20155 84 aa8.94□□□□□ -0.98
CPSF7-203ENST00000413184 RFX1P22670 979 aa8.94□□□□□ -0.98
CPSF7-203ENST00000413184 GJA9P57773 515 aa8.94□□□□□ -0.98
CPSF7-203ENST00000413184 FOXC1Q12948 553 aa8.94□□□□□ -0.98
CPSF7-203ENST00000413184 PICALMQ13492 652 aa8.94□□□□□ -0.98
CPSF7-203ENST00000413184 WDR43Q15061 677 aaKnown RBP eCLIP8.94□□□□□ -0.98
CPSF7-203ENST00000413184 DIXDC1Q155Q3 683 aa8.94□□□□□ -0.98
CPSF7-203ENST00000413184 FBXO11Q86XK2 927 aa8.94□□□□□ -0.98
CPSF7-203ENST00000413184 ABRAQ8N0Z2 381 aa8.94□□□□□ -0.98
CPSF7-203ENST00000413184 GATA6Q92908 595 aa8.94□□□□□ -0.98
CPSF7-203ENST00000413184 IDI2Q9BXS1 227 aa8.94□□□□□ -0.98
CPSF7-203ENST00000413184 SLC4A5Q9BY07 1137 aa8.94□□□□□ -0.98
CPSF7-203ENST00000413184 LMAN2LQ9H0V9 348 aa8.94□□□□□ -0.98
CPSF7-203ENST00000413184 CLMPQ9H6B4 373 aa8.94□□□□□ -0.98
CPSF7-203ENST00000413184 TRMT13Q9NUP7 481 aaKnown RBP8.94□□□□□ -0.98
CPSF7-203ENST00000413184 NR2E1Q9Y466 385 aa8.94□□□□□ -0.98
CPSF7-203ENST00000413184 ANKRD18BA2A2Z9 1011 aa8.93□□□□□ -0.98
CPSF7-203ENST00000413184 BEX3Q00994 111 aa8.93□□□□□ -0.98
CPSF7-203ENST00000413184 RRP1BQ14684 758 aaKnown RBP8.93□□□□□ -0.98
CPSF7-203ENST00000413184 CCDC6Q16204 474 aa8.93□□□□□ -0.98
CPSF7-203ENST00000413184 SPECC1Q5M775 1068 aa8.93□□□□□ -0.98
CPSF7-203ENST00000413184 B4GALNT3Q6L9W6 998 aa8.93□□□□□ -0.98
CPSF7-203ENST00000413184 USP17L2Q6R6M4 530 aa8.93□□□□□ -0.98
CPSF7-203ENST00000413184 LBX2Q6XYB7 198 aa8.93□□□□□ -0.98
CPSF7-203ENST00000413184 NCAPG2Q86XI2 1143 aa8.93□□□□□ -0.98
CPSF7-203ENST00000413184 C1orf210Q8IVY1 113 aa8.93□□□□□ -0.98
CPSF7-203ENST00000413184 SUSD6Q92537 303 aa8.93□□□□□ -0.98
CPSF7-203ENST00000413184 UPF3AQ9H1J1 476 aaKnown RBP8.93□□□□□ -0.98
CPSF7-203ENST00000413184 ALDH8A1Q9H2A2 487 aaPredicted RBP8.93□□□□□ -0.98
CPSF7-203ENST00000413184 EMILIN3Q9NT22 766 aa8.93□□□□□ -0.98
CPSF7-203ENST00000413184 GRIN2DO15399 1336 aa8.93□□□□□ -0.98
CPSF7-203ENST00000413184 KALRNO60229 2985 aa8.93□□□□□ -0.98
CPSF7-203ENST00000413184 DLG5Q8TDM6 1919 aa8.92□□□□□ -0.98
CPSF7-203ENST00000413184 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.92□□□□□ -0.98
CPSF7-203ENST00000413184 SPDYE16A6NNV3 312 aaPredicted RBP8.92□□□□□ -0.98
CPSF7-203ENST00000413184 ENO4A6NNW6 628 aa8.92□□□□□ -0.98
CPSF7-203ENST00000413184 ASGR2P07307 311 aa8.92□□□□□ -0.98
CPSF7-203ENST00000413184 FCER1AP12319 257 aa8.92□□□□□ -0.98
CPSF7-203ENST00000413184 SMPD1P17405 629 aa8.92□□□□□ -0.98
CPSF7-203ENST00000413184 TBC1D8BQ0IIM8 1120 aa8.92□□□□□ -0.98
CPSF7-203ENST00000413184 UBE4AQ14139 1066 aa8.92□□□□□ -0.98
CPSF7-203ENST00000413184 HDGFL1Q5TGJ6 251 aa8.92□□□□□ -0.98
CPSF7-203ENST00000413184 CATSPERGQ6ZRH7 1159 aa8.92□□□□□ -0.98
CPSF7-203ENST00000413184 SIX5Q8N196 739 aa8.92□□□□□ -0.98
CPSF7-203ENST00000413184 EFHBQ8N7U6 833 aa8.92□□□□□ -0.98
CPSF7-203ENST00000413184 ATRIPQ8WXE1 791 aa8.92□□□□□ -0.98
CPSF7-203ENST00000413184 ZFP91Q96JP5 570 aaPredicted RBP8.92□□□□□ -0.98
CPSF7-203ENST00000413184 HYPKQ9NX55 129 aa8.92□□□□□ -0.98
CPSF7-203ENST00000413184 RCAN3Q9UKA8 241 aa8.92□□□□□ -0.98
CPSF7-203ENST00000413184 FBXL21Q9UKT6 434 aa8.92□□□□□ -0.98
CPSF7-203ENST00000413184 CACNA1IQ9P0X4 2223 aa8.92□□□□□ -0.98
CPSF7-203ENST00000413184 GDF9O60383 454 aa8.91□□□□□ -0.98
CPSF7-203ENST00000413184 PGK2P07205 417 aa8.91□□□□□ -0.98
CPSF7-203ENST00000413184 ASNSP08243 561 aa8.91□□□□□ -0.98
CPSF7-203ENST00000413184 CCR10P46092 362 aa8.91□□□□□ -0.98
CPSF7-203ENST00000413184 PSMC6P62333 389 aa8.91□□□□□ -0.98
CPSF7-203ENST00000413184 CNKSR3Q6P9H4 555 aa8.91□□□□□ -0.98
CPSF7-203ENST00000413184 SP7Q8TDD2 431 aaPredicted RBP8.91□□□□□ -0.98
CPSF7-203ENST00000413184 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.91□□□□□ -0.98
CPSF7-203ENST00000413184 SPATC1LQ9H0A9 340 aa8.91□□□□□ -0.98
CPSF7-203ENST00000413184 MROH8Q9H579 483 aa8.91□□□□□ -0.98
CPSF7-203ENST00000413184 ERVK-5Q9HDB9 667 aa8.91□□□□□ -0.98
CPSF7-203ENST00000413184 RXFP3Q9NSD7 469 aa8.91□□□□□ -0.98
CPSF7-203ENST00000413184 RNF216Q9NWF9 866 aaPredicted RBP8.91□□□□□ -0.98
CPSF7-203ENST00000413184 UBR5O95071 2799 aaPredicted RBP8.91□□□□□ -0.98
CPSF7-203ENST00000413184 TICRRQ7Z2Z1 1910 aa8.91□□□□□ -0.98
CPSF7-203ENST00000413184 FREM2Q5SZK8 3169 aa8.91□□□□□ -0.98
CPSF7-203ENST00000413184 ABHD14A-ACY1A0A1B0GW23 586 aa8.9□□□□□ -0.98
CPSF7-203ENST00000413184 PITPNM1O00562 1244 aa8.9□□□□□ -0.98
CPSF7-203ENST00000413184 GRM6O15303 877 aa8.9□□□□□ -0.98
CPSF7-203ENST00000413184 ADCY6O43306 1168 aa8.9□□□□□ -0.98
CPSF7-203ENST00000413184 C1QL1O75973 258 aa8.9□□□□□ -0.98
CPSF7-203ENST00000413184 CTNNB1P35222 781 aa8.9□□□□□ -0.98
CPSF7-203ENST00000413184 EVX2Q03828 476 aa8.9□□□□□ -0.98
CPSF7-203ENST00000413184 PLS1Q14651 629 aa8.9□□□□□ -0.98
CPSF7-203ENST00000413184 ZYXQ15942 572 aaKnown RBP8.9□□□□□ -0.98
CPSF7-203ENST00000413184 CCDC146Q8IYE0 955 aa8.9□□□□□ -0.98
CPSF7-203ENST00000413184 EPC1Q9H2F5 836 aa8.9□□□□□ -0.98
CPSF7-203ENST00000413184 DDX4Q9NQI0 724 aaKnown RBP8.9□□□□□ -0.98
CPSF7-203ENST00000413184 ASXL3Q9C0F0 2248 aa8.89□□□□□ -0.99
CPSF7-203ENST00000413184 EFCAB14O75071 495 aa8.89□□□□□ -0.99
CPSF7-203ENST00000413184 KCNK5O95279 499 aa8.89□□□□□ -0.99
CPSF7-203ENST00000413184 SEC24BO95487 1268 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms