RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 ZNF543Q08ER8 600 aa13.61□□□□□ -0.23
LINC00963-201ENST00000412141 BAATQ14032 418 aaPredicted RBP13.61□□□□□ -0.23
LINC00963-201ENST00000412141 BTNL9Q6UXG8 535 aa13.61□□□□□ -0.23
LINC00963-201ENST00000412141 SH3RF1Q7Z6J0 888 aa13.61□□□□□ -0.23
LINC00963-201ENST00000412141 IQCA1Q86XH1 822 aa13.61□□□□□ -0.23
LINC00963-201ENST00000412141 PNMA1Q8ND90 353 aa13.61□□□□□ -0.23
LINC00963-201ENST00000412141 ZSCAN10Q96SZ4 725 aaPredicted RBP13.61□□□□□ -0.23
LINC00963-201ENST00000412141 ABHD16BQ9H3Z7 469 aa13.61□□□□□ -0.23
LINC00963-201ENST00000412141 KAT14Q9H8E8 782 aa13.61□□□□□ -0.23
LINC00963-201ENST00000412141 ZSWIM5Q9P217 1185 aa13.61□□□□□ -0.23
LINC00963-201ENST00000412141 MCM3APO60318 1980 aa13.61□□□□□ -0.23
LINC00963-201ENST00000412141 DHX16O60231 1041 aaKnown RBP13.6□□□□□ -0.23
LINC00963-201ENST00000412141 ADAMTS4O75173 837 aa13.6□□□□□ -0.23
LINC00963-201ENST00000412141 DUSP11O75319 330 aaKnown RBP13.6□□□□□ -0.23
LINC00963-201ENST00000412141 CHMLP26374 656 aa13.6□□□□□ -0.23
LINC00963-201ENST00000412141 CALML3P27482 149 aa13.6□□□□□ -0.23
LINC00963-201ENST00000412141 ACLYP53396 1101 aa13.6□□□□□ -0.23
LINC00963-201ENST00000412141 BEX3Q00994 111 aa13.6□□□□□ -0.23
LINC00963-201ENST00000412141 TNFAIP2Q03169 654 aa13.6□□□□□ -0.23
LINC00963-201ENST00000412141 PTH1RQ03431 593 aa13.6□□□□□ -0.23
LINC00963-201ENST00000412141 USH1GQ495M9 461 aa13.6□□□□□ -0.23
LINC00963-201ENST00000412141 GNASQ5JWF2 1037 aa13.6□□□□□ -0.23
LINC00963-201ENST00000412141 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.6□□□□□ -0.23
LINC00963-201ENST00000412141 DGKHQ86XP1 1220 aa13.6□□□□□ -0.23
LINC00963-201ENST00000412141 FBXO16Q8IX29 292 aaPredicted RBP13.6□□□□□ -0.23
LINC00963-201ENST00000412141 TDHQ8IZJ6 230 aa13.6□□□□□ -0.23
LINC00963-201ENST00000412141 SPC25Q9HBM1 224 aa13.6□□□□□ -0.23
LINC00963-201ENST00000412141 VAT1LQ9HCJ6 419 aa13.6□□□□□ -0.23
LINC00963-201ENST00000412141 PDGFCQ9NRA1 345 aa13.6□□□□□ -0.23
LINC00963-201ENST00000412141 ASTN1O14525 1302 aa13.6□□□□□ -0.23
LINC00963-201ENST00000412141 TRIM43BA6NCK2 446 aa13.59□□□□□ -0.23
LINC00963-201ENST00000412141 ASB14A6NK59 587 aa13.59□□□□□ -0.23
LINC00963-201ENST00000412141 TMEM63BQ5T3F8 832 aa13.59□□□□□ -0.23
LINC00963-201ENST00000412141 SLC30A10Q6XR72 485 aa13.59□□□□□ -0.23
LINC00963-201ENST00000412141 SKAP1Q86WV1 359 aa13.59□□□□□ -0.23
LINC00963-201ENST00000412141 ENAHQ8N8S7 591 aaPredicted RBP13.59□□□□□ -0.23
LINC00963-201ENST00000412141 RUFY2Q8WXA3 655 aa13.59□□□□□ -0.23
LINC00963-201ENST00000412141 BADQ92934 168 aa13.59□□□□□ -0.23
LINC00963-201ENST00000412141 TRIM43Q96BQ3 446 aaPredicted RBP13.59□□□□□ -0.23
LINC00963-201ENST00000412141 UBAC1Q9BSL1 405 aa13.59□□□□□ -0.23
LINC00963-201ENST00000412141 KRT23Q9C075 422 aa13.59□□□□□ -0.23
LINC00963-201ENST00000412141 KATNBL1Q9H079 304 aa13.59□□□□□ -0.23
LINC00963-201ENST00000412141 STARD7Q9NQZ5 370 aa13.59□□□□□ -0.23
LINC00963-201ENST00000412141 PDLIM7Q9NR12 457 aa13.59□□□□□ -0.23
LINC00963-201ENST00000412141 TNKSO95271 1327 aa13.59□□□□□ -0.23
LINC00963-201ENST00000412141 SNHG28P0DPA3 235 aa13.58□□□□□ -0.24
LINC00963-201ENST00000412141 CCDC178Q5BJE1 867 aa13.58□□□□□ -0.24
LINC00963-201ENST00000412141 GPATCH4Q5T3I0 446 aaKnown RBP13.58□□□□□ -0.24
LINC00963-201ENST00000412141 CYB5R4Q7L1T6 521 aa13.58□□□□□ -0.24
LINC00963-201ENST00000412141 KLHDC9Q8NEP7 349 aa13.58□□□□□ -0.24
LINC00963-201ENST00000412141 DYNC1LI2O43237 492 aaPredicted RBP13.57□□□□□ -0.24
LINC00963-201ENST00000412141 ASGR1P07306 291 aa13.57□□□□□ -0.24
LINC00963-201ENST00000412141 SNX17Q15036 470 aa13.57□□□□□ -0.24
LINC00963-201ENST00000412141 IFIT1BQ5T764 474 aaKnown RBP13.57□□□□□ -0.24
LINC00963-201ENST00000412141 RNF207Q6ZRF8 634 aa13.57□□□□□ -0.24
LINC00963-201ENST00000412141 KIAA1211Q6ZU35 1233 aa13.57□□□□□ -0.24
LINC00963-201ENST00000412141 Q7L0L9 218 aa13.57□□□□□ -0.24
LINC00963-201ENST00000412141 CHST3Q7LGC8 479 aa13.57□□□□□ -0.24
LINC00963-201ENST00000412141 ADGRF4Q8IZF3 695 aa13.57□□□□□ -0.24
LINC00963-201ENST00000412141 NUP133Q8WUM0 1156 aa13.57□□□□□ -0.24
LINC00963-201ENST00000412141 CLEC4DQ8WXI8 215 aa13.57□□□□□ -0.24
LINC00963-201ENST00000412141 TSEN34Q9BSV6 310 aaKnown RBP13.57□□□□□ -0.24
LINC00963-201ENST00000412141 AP5M1Q9H0R1 490 aa13.57□□□□□ -0.24
LINC00963-201ENST00000412141 CNNM2Q9H8M5 875 aa13.57□□□□□ -0.24
LINC00963-201ENST00000412141 TMEM39AQ9NV64 488 aa13.57□□□□□ -0.24
LINC00963-201ENST00000412141 TAF6LQ9Y6J9 622 aa13.57□□□□□ -0.24
LINC00963-201ENST00000412141 LAMA2P24043 3122 aaKnown RBP13.56□□□□□ -0.24
LINC00963-201ENST00000412141 DCDC2CA8MYV0 355 aa13.56□□□□□ -0.24
LINC00963-201ENST00000412141 CLTBP09497 229 aa13.56□□□□□ -0.24
LINC00963-201ENST00000412141 PARP1P09874 1014 aaKnown RBP13.56□□□□□ -0.24
LINC00963-201ENST00000412141 RAG1P15918 1043 aa13.56□□□□□ -0.24
LINC00963-201ENST00000412141 SMPD1P17405 629 aa13.56□□□□□ -0.24
LINC00963-201ENST00000412141 ITGB8P26012 769 aa13.56□□□□□ -0.24
LINC00963-201ENST00000412141 GJA9P57773 515 aa13.56□□□□□ -0.24
LINC00963-201ENST00000412141 RPS6P62753 249 aaKnown RBP13.56□□□□□ -0.24
LINC00963-201ENST00000412141 TRDNQ13061 729 aa13.56□□□□□ -0.24
LINC00963-201ENST00000412141 CDC37Q16543 378 aaPredicted RBP13.56□□□□□ -0.24
LINC00963-201ENST00000412141 CCSAPQ6IQ19 270 aaPredicted RBP13.56□□□□□ -0.24
LINC00963-201ENST00000412141 TAPT1Q6NXT6 567 aa13.56□□□□□ -0.24
LINC00963-201ENST00000412141 CXCL17Q6UXB2 119 aa13.56□□□□□ -0.24
LINC00963-201ENST00000412141 TLK2Q86UE8 772 aa13.56□□□□□ -0.24
LINC00963-201ENST00000412141 PCSK9Q8NBP7 692 aaKnown RBP13.56□□□□□ -0.24
LINC00963-201ENST00000412141 TBC1D5Q92609 795 aa13.56□□□□□ -0.24
LINC00963-201ENST00000412141 ANKS1AQ92625 1134 aa13.56□□□□□ -0.24
LINC00963-201ENST00000412141 GLT1D1Q96MS3 346 aa13.56□□□□□ -0.24
LINC00963-201ENST00000412141 ADD3Q9UEY8 706 aaKnown RBP13.56□□□□□ -0.24
LINC00963-201ENST00000412141 U3KPZ7 1027 aaPredicted RBP13.56□□□□□ -0.24
LINC00963-201ENST00000412141 MOXD2PA6NHM9 499 aa13.55□□□□□ -0.24
LINC00963-201ENST00000412141 IFIT3O14879 490 aaKnown RBP13.55□□□□□ -0.24
LINC00963-201ENST00000412141 CTAGE5O15320 804 aa13.55□□□□□ -0.24
LINC00963-201ENST00000412141 SGSM2O43147 1006 aa13.55□□□□□ -0.24
LINC00963-201ENST00000412141 CYP21A2P08686 494 aa13.55□□□□□ -0.24
LINC00963-201ENST00000412141 ALDH5A1P51649 535 aaPredicted RBP13.55□□□□□ -0.24
LINC00963-201ENST00000412141 SHHQ15465 462 aa13.55□□□□□ -0.24
LINC00963-201ENST00000412141 LRIT3Q3SXY7 679 aa13.55□□□□□ -0.24
LINC00963-201ENST00000412141 C9orf50Q5SZB4 431 aa13.55□□□□□ -0.24
LINC00963-201ENST00000412141 RALYLQ86SE5 291 aaKnown RBP13.55□□□□□ -0.24
LINC00963-201ENST00000412141 STAG2Q8N3U4 1231 aa13.55□□□□□ -0.24
LINC00963-201ENST00000412141 UPF3AQ9H1J1 476 aaKnown RBP13.55□□□□□ -0.24
LINC00963-201ENST00000412141 RAD50Q92878 1312 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms