RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 ZNF296Q8WUU4 475 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-209ENST00000410038 COA7Q96BR5 231 aa16.59■□□□□ 0.25
LIMS2-209ENST00000410038 LLPHQ9BRT6 129 aaKnown RBP16.59■□□□□ 0.25
LIMS2-209ENST00000410038 HOMER2Q9NSB8 354 aa16.59■□□□□ 0.25
LIMS2-209ENST00000410038 RBM27Q9P2N5 1060 aaKnown RBP16.59■□□□□ 0.25
LIMS2-209ENST00000410038 STK36Q9NRP7 1315 aa16.59■□□□□ 0.25
LIMS2-209ENST00000410038 PTPDC1A2A3K4 754 aa16.59■□□□□ 0.25
LIMS2-209ENST00000410038 ECM2O94769 699 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-209ENST00000410038 CTGFP29279 349 aa16.59■□□□□ 0.25
LIMS2-209ENST00000410038 CUL4AQ13619 759 aa16.59■□□□□ 0.25
LIMS2-209ENST00000410038 PFKFB3Q16875 520 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-209ENST00000410038 TKFCQ3LXA3 575 aa16.59■□□□□ 0.25
LIMS2-209ENST00000410038 GPKOWQ92917 476 aaPredicted RBP eCLIP16.59■□□□□ 0.25
LIMS2-209ENST00000410038 TRERF1Q96PN7 1200 aa16.59■□□□□ 0.25
LIMS2-209ENST00000410038 MROH8Q9H579 483 aa16.59■□□□□ 0.25
LIMS2-209ENST00000410038 RNF146Q9NTX7 359 aa16.59■□□□□ 0.25
LIMS2-209ENST00000410038 PCDHA1Q9Y5I3 950 aa16.59■□□□□ 0.25
LIMS2-209ENST00000410038 FKTNO75072 461 aa16.58■□□□□ 0.24
LIMS2-209ENST00000410038 DEXIO95424 95 aa16.58■□□□□ 0.24
LIMS2-209ENST00000410038 SCG2P13521 617 aa16.58■□□□□ 0.24
LIMS2-209ENST00000410038 FDPSP14324 419 aaKnown RBP16.58■□□□□ 0.24
LIMS2-209ENST00000410038 MAPK4P31152 587 aa16.58■□□□□ 0.24
LIMS2-209ENST00000410038 COPB2P35606 906 aa16.58■□□□□ 0.24
LIMS2-209ENST00000410038 CAP1Q01518 475 aa16.58■□□□□ 0.24
LIMS2-209ENST00000410038 TRAF1Q13077 416 aa16.58■□□□□ 0.24
LIMS2-209ENST00000410038 PKN2Q16513 984 aaKnown RBP16.58■□□□□ 0.24
LIMS2-209ENST00000410038 MUM1L1Q5H9M0 696 aa16.58■□□□□ 0.24
LIMS2-209ENST00000410038 WDR78Q5VTH9 848 aa16.58■□□□□ 0.24
LIMS2-209ENST00000410038 WWC2Q6AWC2 1192 aa16.58■□□□□ 0.24
LIMS2-209ENST00000410038 HEATR3Q7Z4Q2 680 aa16.58■□□□□ 0.24
LIMS2-209ENST00000410038 CTU1Q7Z7A3 348 aaKnown RBP16.58■□□□□ 0.24
LIMS2-209ENST00000410038 CCAR1Q8IX12 1150 aaKnown RBP16.58■□□□□ 0.24
LIMS2-209ENST00000410038 SMARCC2Q8TAQ2 1214 aa16.58■□□□□ 0.24
LIMS2-209ENST00000410038 ARHGAP39Q9C0H5 1083 aa16.58■□□□□ 0.24
LIMS2-209ENST00000410038 ORC3Q9UBD5 711 aaPredicted RBP16.58■□□□□ 0.24
LIMS2-209ENST00000410038 ABCB11O95342 1321 aa16.58■□□□□ 0.24
LIMS2-209ENST00000410038 GPR142Q7Z601 462 aa16.57■□□□□ 0.24
LIMS2-209ENST00000410038 CHST13Q8NET6 341 aa16.57■□□□□ 0.24
LIMS2-209ENST00000410038 CLEC4DQ8WXI8 215 aa16.57■□□□□ 0.24
LIMS2-209ENST00000410038 DDX11Q96FC9 970 aa16.57■□□□□ 0.24
LIMS2-209ENST00000410038 FBXO40Q9UH90 709 aa16.57■□□□□ 0.24
LIMS2-209ENST00000410038 NFIBO00712 420 aa16.56■□□□□ 0.24
LIMS2-209ENST00000410038 PSMC4P43686 418 aa16.56■□□□□ 0.24
LIMS2-209ENST00000410038 TYW1BQ6NUM6 668 aa16.56■□□□□ 0.24
LIMS2-209ENST00000410038 CD99L2Q8TCZ2 262 aa16.56■□□□□ 0.24
LIMS2-209ENST00000410038 TRIM47Q96LD4 638 aa16.56■□□□□ 0.24
LIMS2-209ENST00000410038 AIFM3Q96NN9 605 aa16.56■□□□□ 0.24
LIMS2-209ENST00000410038 ACAD9Q9H845 621 aa16.56■□□□□ 0.24
LIMS2-209ENST00000410038 BARHL2Q9NY43 387 aa16.56■□□□□ 0.24
LIMS2-209ENST00000410038 PLXNA1Q9UIW2 1896 aa16.56■□□□□ 0.24
LIMS2-209ENST00000410038 MRPL11Q9Y3B7 192 aaKnown RBP16.56■□□□□ 0.24
LIMS2-209ENST00000410038 LCTP09848 1927 aa16.56■□□□□ 0.24
LIMS2-209ENST00000410038 hCG_1984214I3L0E3 225 aa16.56■□□□□ 0.24
LIMS2-209ENST00000410038 STXBP3O00186 592 aa16.56■□□□□ 0.24
LIMS2-209ENST00000410038 OPLAHO14841 1288 aa16.56■□□□□ 0.24
LIMS2-209ENST00000410038 FCGRTP55899 365 aa16.56■□□□□ 0.24
LIMS2-209ENST00000410038 KIF22Q14807 665 aa16.56■□□□□ 0.24
LIMS2-209ENST00000410038 PLEKHH3Q7Z736 793 aa16.56■□□□□ 0.24
LIMS2-209ENST00000410038 ZNF713Q8N859 430 aaPredicted RBP16.56■□□□□ 0.24
LIMS2-209ENST00000410038 ERO1AQ96HE7 468 aa16.56■□□□□ 0.24
LIMS2-209ENST00000410038 ZNF236Q9UL36 1845 aa16.55■□□□□ 0.24
LIMS2-209ENST00000410038 HTTP42858 3142 aa16.55■□□□□ 0.24
LIMS2-209ENST00000410038 CENPFP49454 3210 aa16.55■□□□□ 0.24
LIMS2-209ENST00000410038 TNPO2O14787 897 aaKnown RBP16.55■□□□□ 0.24
LIMS2-209ENST00000410038 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.55■□□□□ 0.24
LIMS2-209ENST00000410038 SHISA4Q96DD7 197 aa16.55■□□□□ 0.24
LIMS2-209ENST00000410038 CWC22Q9HCG8 908 aaKnown RBP16.55■□□□□ 0.24
LIMS2-209ENST00000410038 TSHZ2Q9NRE2 1034 aa16.55■□□□□ 0.24
LIMS2-209ENST00000410038 STRNO43815 780 aa16.54■□□□□ 0.24
LIMS2-209ENST00000410038 FCER1AP12319 257 aa16.54■□□□□ 0.24
LIMS2-209ENST00000410038 PTPREP23469 700 aa16.54■□□□□ 0.24
LIMS2-209ENST00000410038 NAPAP54920 295 aa16.54■□□□□ 0.24
LIMS2-209ENST00000410038 HMGN5P82970 282 aaKnown RBP16.54■□□□□ 0.24
LIMS2-209ENST00000410038 TBC1D5Q92609 795 aa16.54■□□□□ 0.24
LIMS2-209ENST00000410038 A1CFQ9NQ94 594 aaKnown RBP16.54■□□□□ 0.24
LIMS2-209ENST00000410038 VPS54Q9P1Q0 977 aa16.54■□□□□ 0.24
LIMS2-209ENST00000410038 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.54■□□□□ 0.24
LIMS2-209ENST00000410038 IVNS1ABPQ9Y6Y0 642 aa16.54■□□□□ 0.24
LIMS2-209ENST00000410038 KCTD2Q14681 263 aa16.53■□□□□ 0.24
LIMS2-209ENST00000410038 PPP1R18Q6NYC8 613 aa16.53■□□□□ 0.24
LIMS2-209ENST00000410038 NSMFQ6X4W1 530 aa16.53■□□□□ 0.24
LIMS2-209ENST00000410038 ABRAQ8N0Z2 381 aa16.53■□□□□ 0.24
LIMS2-209ENST00000410038 ANKRD35Q8N283 1001 aa16.53■□□□□ 0.24
LIMS2-209ENST00000410038 WASF1Q92558 559 aa16.53■□□□□ 0.24
LIMS2-209ENST00000410038 INTS4Q96HW7 963 aaKnown RBP16.53■□□□□ 0.24
LIMS2-209ENST00000410038 MMP19Q99542 508 aa16.53■□□□□ 0.24
LIMS2-209ENST00000410038 ALG1Q9BT22 464 aa16.53■□□□□ 0.24
LIMS2-209ENST00000410038 SLC15A5A6NIM6 579 aa16.53■□□□□ 0.24
LIMS2-209ENST00000410038 GRB14Q14449 540 aa16.53■□□□□ 0.24
LIMS2-209ENST00000410038 MCF2L2Q86YR7 1114 aa16.53■□□□□ 0.24
LIMS2-209ENST00000410038 RGS22Q8NE09 1264 aa16.53■□□□□ 0.24
LIMS2-209ENST00000410038 SH3GLB2Q9NR46 395 aa16.53■□□□□ 0.24
LIMS2-209ENST00000410038 GJB4Q9NTQ9 266 aa16.53■□□□□ 0.24
LIMS2-209ENST00000410038 CYP39A1Q9NYL5 469 aa16.53■□□□□ 0.24
LIMS2-209ENST00000410038 GJD2Q9UKL4 321 aa16.53■□□□□ 0.24
LIMS2-209ENST00000410038 SMC3Q9UQE7 1217 aa16.53■□□□□ 0.24
LIMS2-209ENST00000410038 CFBP00751 764 aa16.52■□□□□ 0.23
LIMS2-209ENST00000410038 GJB2P29033 226 aa16.52■□□□□ 0.23
LIMS2-209ENST00000410038 ADORA2AP29274 412 aa16.52■□□□□ 0.23
LIMS2-209ENST00000410038 GHRHRQ02643 423 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms