RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 NFE2L3Q9Y4A8 694 aa21.88■■□□□ 1.09
LIMS2-204ENST00000409286 GH2P01242 217 aa21.87■■□□□ 1.09
LIMS2-204ENST00000409286 CASP1P29466 404 aa21.87■■□□□ 1.09
LIMS2-204ENST00000409286 CDC25AP30304 524 aa21.87■■□□□ 1.09
LIMS2-204ENST00000409286 CUL4BQ13620 913 aa21.87■■□□□ 1.09
LIMS2-204ENST00000409286 MTMR9Q96QG7 549 aa21.87■■□□□ 1.09
LIMS2-204ENST00000409286 PSTPIP2Q9H939 334 aa21.87■■□□□ 1.09
LIMS2-204ENST00000409286 PPP1R3GB7ZBB8 358 aa21.86■■□□□ 1.09
LIMS2-204ENST00000409286 POLD1P28340 1107 aa21.86■■□□□ 1.09
LIMS2-204ENST00000409286 MMP14P50281 582 aa21.86■■□□□ 1.09
LIMS2-204ENST00000409286 QRICH1Q2TAL8 776 aa21.86■■□□□ 1.09
LIMS2-204ENST00000409286 NAALADL2Q58DX5 795 aa21.86■■□□□ 1.09
LIMS2-204ENST00000409286 SPATA1Q5VX52 437 aa21.86■■□□□ 1.09
LIMS2-204ENST00000409286 PPP4R3AQ6IN85 833 aa21.86■■□□□ 1.09
LIMS2-204ENST00000409286 TMC6Q7Z403 805 aa21.86■■□□□ 1.09
LIMS2-204ENST00000409286 CABP7Q86V35 215 aa21.86■■□□□ 1.09
LIMS2-204ENST00000409286 C17orf53Q8N3J3 647 aaPredicted RBP21.86■■□□□ 1.09
LIMS2-204ENST00000409286 RASSF8Q8NHQ8 419 aa21.86■■□□□ 1.09
LIMS2-204ENST00000409286 NAP1L5Q96NT1 182 aaPredicted RBP21.86■■□□□ 1.09
LIMS2-204ENST00000409286 NAP1L4Q99733 375 aaKnown RBP21.86■■□□□ 1.09
LIMS2-204ENST00000409286 ZBTB12Q9Y330 459 aaPredicted RBP21.86■■□□□ 1.09
LIMS2-204ENST00000409286 COL4A5P29400 1685 aa21.86■■□□□ 1.09
LIMS2-204ENST00000409286 CLRN2A0PK11 232 aa21.85■■□□□ 1.09
LIMS2-204ENST00000409286 RAD21O60216 631 aa21.85■■□□□ 1.09
LIMS2-204ENST00000409286 RRP1BQ14684 758 aaKnown RBP21.85■■□□□ 1.09
LIMS2-204ENST00000409286 DALRD3Q5D0E6 543 aaKnown RBP21.85■■□□□ 1.09
LIMS2-204ENST00000409286 CCDC150Q8NCX0 1101 aa21.85■■□□□ 1.09
LIMS2-204ENST00000409286 STAMQ92783 540 aa21.85■■□□□ 1.09
LIMS2-204ENST00000409286 MED15Q96RN5 788 aa21.85■■□□□ 1.09
LIMS2-204ENST00000409286 BLZF1Q9H2G9 400 aa21.85■■□□□ 1.09
LIMS2-204ENST00000409286 ATF5Q9Y2D1 282 aaPredicted RBP21.85■■□□□ 1.09
LIMS2-204ENST00000409286 PP2D1A8MPX8 630 aa21.85■■□□□ 1.09
LIMS2-204ENST00000409286 EDIL3O43854 480 aa21.85■■□□□ 1.09
LIMS2-204ENST00000409286 TBC1D12O60347 775 aa21.85■■□□□ 1.09
LIMS2-204ENST00000409286 NDUFB10O96000 172 aa21.85■■□□□ 1.09
LIMS2-204ENST00000409286 RPN1P04843 607 aaKnown RBP21.85■■□□□ 1.09
LIMS2-204ENST00000409286 CDK11BP21127 795 aaKnown RBP21.85■■□□□ 1.09
LIMS2-204ENST00000409286 FXR2P51116 673 aaKnown RBP eCLIP21.85■■□□□ 1.09
LIMS2-204ENST00000409286 JAG1P78504 1218 aa21.85■■□□□ 1.09
LIMS2-204ENST00000409286 CDC37Q16543 378 aaPredicted RBP21.85■■□□□ 1.09
LIMS2-204ENST00000409286 CALCRLQ16602 461 aa21.85■■□□□ 1.09
LIMS2-204ENST00000409286 MCTP2Q6DN12 878 aa21.85■■□□□ 1.09
LIMS2-204ENST00000409286 BTNL9Q6UXG8 535 aa21.85■■□□□ 1.09
LIMS2-204ENST00000409286 FAM83AQ86UY5 434 aa21.85■■□□□ 1.09
LIMS2-204ENST00000409286 IGSF22Q8N9C0 903 aa21.85■■□□□ 1.09
LIMS2-204ENST00000409286 KBTBD4Q9NVX7 518 aa21.85■■□□□ 1.09
LIMS2-204ENST00000409286 CNTNAP1P78357 1384 aa21.85■■□□□ 1.09
LIMS2-204ENST00000409286 BMP3P12645 472 aa21.84■■□□□ 1.09
LIMS2-204ENST00000409286 CD44P16070 742 aaKnown RBP21.84■■□□□ 1.09
LIMS2-204ENST00000409286 ZNF658Q5TYW1 1059 aaPredicted RBP21.84■■□□□ 1.09
LIMS2-204ENST00000409286 POTEDQ86YR6 584 aa21.84■■□□□ 1.09
LIMS2-204ENST00000409286 ZBED3Q96IU2 234 aaPredicted RBP21.84■■□□□ 1.09
LIMS2-204ENST00000409286 MTFR1LQ9H019 292 aa21.84■■□□□ 1.09
LIMS2-204ENST00000409286 PCDHA1Q9Y5I3 950 aa21.84■■□□□ 1.09
LIMS2-204ENST00000409286 GCFC2P16383 781 aaKnown RBP21.83■■□□□ 1.09
LIMS2-204ENST00000409286 TECP42680 631 aa21.83■■□□□ 1.09
LIMS2-204ENST00000409286 TNNI2P48788 182 aa21.83■■□□□ 1.09
LIMS2-204ENST00000409286 CXCL9Q07325 125 aa21.83■■□□□ 1.09
LIMS2-204ENST00000409286 PDIA5Q14554 519 aa21.83■■□□□ 1.09
LIMS2-204ENST00000409286 KCNB1Q14721 858 aa21.83■■□□□ 1.09
LIMS2-204ENST00000409286 ARID5BQ14865 1188 aa21.83■■□□□ 1.09
LIMS2-204ENST00000409286 UBE2SQ16763 222 aa21.83■■□□□ 1.09
LIMS2-204ENST00000409286 VSTM4Q8IW00 320 aa21.83■■□□□ 1.09
LIMS2-204ENST00000409286 TRMT44Q8IYL2 757 aaKnown RBP21.83■■□□□ 1.09
LIMS2-204ENST00000409286 DPF2Q92785 391 aa21.83■■□□□ 1.09
LIMS2-204ENST00000409286 ZBTB7AO95365 584 aa21.82■■□□□ 1.08
LIMS2-204ENST00000409286 TMEM266Q2M3C6 531 aa21.82■■□□□ 1.08
LIMS2-204ENST00000409286 SYDE2Q5VT97 1194 aa21.82■■□□□ 1.08
LIMS2-204ENST00000409286 CIAPIN1Q6FI81 312 aa21.82■■□□□ 1.08
LIMS2-204ENST00000409286 RAB34Q9BZG1 259 aa21.82■■□□□ 1.08
LIMS2-204ENST00000409286 ARHGEF10LQ9HCE6 1279 aa21.82■■□□□ 1.08
LIMS2-204ENST00000409286 SKILP12757 684 aa21.82■■□□□ 1.08
LIMS2-204ENST00000409286 DNTTIP2Q5QJE6 756 aaKnown RBP21.82■■□□□ 1.08
LIMS2-204ENST00000409286 CALML4Q96GE6 196 aa21.82■■□□□ 1.08
LIMS2-204ENST00000409286 AMNQ9BXJ7 453 aa21.82■■□□□ 1.08
LIMS2-204ENST00000409286 TAOK3Q9H2K8 898 aa21.82■■□□□ 1.08
LIMS2-204ENST00000409286 R3HCC1Q9Y3T6 440 aaKnown RBP21.82■■□□□ 1.08
LIMS2-204ENST00000409286 SYNRGQ9UMZ2 1314 aa21.81■■□□□ 1.08
LIMS2-204ENST00000409286 TDP2O95551 362 aa21.81■■□□□ 1.08
LIMS2-204ENST00000409286 PLCG1P19174 1290 aa21.81■■□□□ 1.08
LIMS2-204ENST00000409286 TXKP42681 527 aa21.81■■□□□ 1.08
LIMS2-204ENST00000409286 CCZ1BP86790 482 aa21.81■■□□□ 1.08
LIMS2-204ENST00000409286 CCZ1P86791 482 aaPredicted RBP21.81■■□□□ 1.08
LIMS2-204ENST00000409286 JDP2Q8WYK2 163 aa21.81■■□□□ 1.08
LIMS2-204ENST00000409286 GTPBP4Q9BZE4 634 aaKnown RBP21.81■■□□□ 1.08
LIMS2-204ENST00000409286 VEZTQ9HBM0 779 aa21.81■■□□□ 1.08
LIMS2-204ENST00000409286 SAMSN1Q9NSI8 373 aaKnown RBP21.81■■□□□ 1.08
LIMS2-204ENST00000409286 RWDD2AQ9UIY3 292 aa21.81■■□□□ 1.08
LIMS2-204ENST00000409286 A0A1W2PRG0 241 aa21.8■■□□□ 1.08
LIMS2-204ENST00000409286 TMEM232C9JQI7 657 aa21.8■■□□□ 1.08
LIMS2-204ENST00000409286 SLC37A4O43826 429 aa21.8■■□□□ 1.08
LIMS2-204ENST00000409286 USP11P51784 963 aa21.8■■□□□ 1.08
LIMS2-204ENST00000409286 AP3B2Q13367 1082 aa21.8■■□□□ 1.08
LIMS2-204ENST00000409286 TNIP1Q15025 636 aa21.8■■□□□ 1.08
LIMS2-204ENST00000409286 KLHL10Q6JEL2 608 aa21.8■■□□□ 1.08
LIMS2-204ENST00000409286 FBXO11Q86XK2 927 aa21.8■■□□□ 1.08
LIMS2-204ENST00000409286 MMTAG2Q9BU76 263 aaKnown RBP21.8■■□□□ 1.08
LIMS2-204ENST00000409286 LRWD1Q9UFC0 647 aa21.8■■□□□ 1.08
LIMS2-204ENST00000409286 TMX2Q9Y320 296 aa21.8■■□□□ 1.08
LIMS2-204ENST00000409286 SFPQP23246 707 aaKnown RBP eCLIP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms