RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 PCDHA13Q9Y5I0 950 aa19.37■□□□□ 0.69
SMPD4-202ENST00000409031 PARP3Q9Y6F1 533 aa19.37■□□□□ 0.69
SMPD4-202ENST00000409031 LIN9Q5TKA1 542 aa19.37■□□□□ 0.69
SMPD4-202ENST00000409031 P2RX5Q93086 422 aa19.37■□□□□ 0.69
SMPD4-202ENST00000409031 TCHPQ9BT92 498 aa19.37■□□□□ 0.69
SMPD4-202ENST00000409031 THEGQ9P2T0 379 aa19.37■□□□□ 0.69
SMPD4-202ENST00000409031 ARMCX3Q9UH62 379 aaPredicted RBP19.37■□□□□ 0.69
SMPD4-202ENST00000409031 CFAP73A6NFT4 308 aa19.36■□□□□ 0.69
SMPD4-202ENST00000409031 CALCRLQ16602 461 aa19.36■□□□□ 0.69
SMPD4-202ENST00000409031 RILPQ96NA2 401 aa19.36■□□□□ 0.69
SMPD4-202ENST00000409031 SH3TC1Q8TE82 1336 aa19.36■□□□□ 0.69
SMPD4-202ENST00000409031 EIF3HO15372 352 aaKnown RBP eCLIP19.36■□□□□ 0.694e-7■□□□□ 8.8
SMPD4-202ENST00000409031 NT5C3AQ9H0P0 336 aa19.36■□□□□ 0.69
SMPD4-202ENST00000409031 FMNL1O95466 1100 aaPredicted RBP19.36■□□□□ 0.69
SMPD4-202ENST00000409031 ABCB4P21439 1286 aa19.36■□□□□ 0.69
SMPD4-202ENST00000409031 PDE6CP51160 858 aa19.36■□□□□ 0.69
SMPD4-202ENST00000409031 MAN2A1Q16706 1144 aa19.36■□□□□ 0.69
SMPD4-202ENST00000409031 TCP11X2Q5H9J9 407 aa19.36■□□□□ 0.69
SMPD4-202ENST00000409031 WDR78Q5VTH9 848 aa19.36■□□□□ 0.69
SMPD4-202ENST00000409031 ANKRD35Q8N283 1001 aa19.36■□□□□ 0.69
SMPD4-202ENST00000409031 BBOF1Q8ND07 529 aa19.36■□□□□ 0.69
SMPD4-202ENST00000409031 RUBCNQ92622 972 aa19.36■□□□□ 0.69
SMPD4-202ENST00000409031 TLR7Q9NYK1 1049 aaKnown RBP19.36■□□□□ 0.69
SMPD4-202ENST00000409031 EIF4A3P38919 411 aaKnown RBP19.36■□□□□ 0.69
SMPD4-202ENST00000409031 ARHGAP42A6NI28 874 aa19.35■□□□□ 0.69
SMPD4-202ENST00000409031 TUBB6Q9BUF5 446 aa19.35■□□□□ 0.69
SMPD4-202ENST00000409031 RNF26Q9BY78 433 aaPredicted RBP19.35■□□□□ 0.69
SMPD4-202ENST00000409031 STK24Q9Y6E0 443 aa19.35■□□□□ 0.69
SMPD4-202ENST00000409031 PPP1R37O75864 691 aa19.35■□□□□ 0.69
SMPD4-202ENST00000409031 ITGA6P23229 1130 aa19.35■□□□□ 0.69
SMPD4-202ENST00000409031 TPD52P55327 224 aaPredicted RBP19.35■□□□□ 0.69
SMPD4-202ENST00000409031 C6orf118Q5T5N4 469 aa19.35■□□□□ 0.69
SMPD4-202ENST00000409031 MB21D1Q8N884 522 aa19.35■□□□□ 0.69
SMPD4-202ENST00000409031 FMO2Q99518 471 aa19.35■□□□□ 0.69
SMPD4-202ENST00000409031 CCDC188H7C350 402 aa19.35■□□□□ 0.69
SMPD4-202ENST00000409031 SRGAP2O75044 1071 aa19.35■□□□□ 0.69
SMPD4-202ENST00000409031 KIF11P52732 1056 aa19.35■□□□□ 0.69
SMPD4-202ENST00000409031 TRPC3Q13507 836 aa19.35■□□□□ 0.69
SMPD4-202ENST00000409031 LPIN2Q92539 896 aa19.35■□□□□ 0.69
SMPD4-202ENST00000409031 GLT8D2Q9H1C3 349 aa19.35■□□□□ 0.69
SMPD4-202ENST00000409031 GPR108Q9NPR9 543 aa19.35■□□□□ 0.69
SMPD4-202ENST00000409031 MMP1P03956 469 aa19.35■□□□□ 0.69
SMPD4-202ENST00000409031 MAGOHBQ96A72 148 aaKnown RBP19.35■□□□□ 0.69
SMPD4-202ENST00000409031 ELAC2Q9BQ52 826 aaKnown RBP19.35■□□□□ 0.69
SMPD4-202ENST00000409031 COBLO75128 1261 aa19.34■□□□□ 0.69
SMPD4-202ENST00000409031 PLTPP55058 493 aa19.34■□□□□ 0.69
SMPD4-202ENST00000409031 PPP1R21Q6ZMI0 780 aa19.34■□□□□ 0.69
SMPD4-202ENST00000409031 SCYL3Q8IZE3 742 aa19.34■□□□□ 0.69
SMPD4-202ENST00000409031 FAM89AQ96GI7 184 aa19.34■□□□□ 0.69
SMPD4-202ENST00000409031 HSPA6P17066 643 aa19.34■□□□□ 0.69
SMPD4-202ENST00000409031 IFNAR1P17181 557 aa19.34■□□□□ 0.69
SMPD4-202ENST00000409031 ADCY8P40145 1251 aa19.34■□□□□ 0.69
SMPD4-202ENST00000409031 IFNL3Q8IZI9 196 aa19.34■□□□□ 0.69
SMPD4-202ENST00000409031 MSANTD4Q8NCY6 345 aa19.34■□□□□ 0.69
SMPD4-202ENST00000409031 ZCRB1Q8TBF4 217 aaKnown RBP19.34■□□□□ 0.69
SMPD4-202ENST00000409031 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.34■□□□□ 0.69
SMPD4-202ENST00000409031 PLCG2P16885 1265 aa19.34■□□□□ 0.69
SMPD4-202ENST00000409031 DYNC1I2Q13409 638 aaKnown RBP19.34■□□□□ 0.69
SMPD4-202ENST00000409031 NAA35Q5VZE5 725 aa19.34■□□□□ 0.69
SMPD4-202ENST00000409031 CMTR1Q8N1G2 835 aaKnown RBP19.34■□□□□ 0.69
SMPD4-202ENST00000409031 EEF2KMTQ96G04 330 aa19.34■□□□□ 0.69
SMPD4-202ENST00000409031 ATP6V1G3Q96LB4 118 aa19.34■□□□□ 0.69
SMPD4-202ENST00000409031 TBC1D7Q9P0N9 293 aa19.34■□□□□ 0.69
SMPD4-202ENST00000409031 HNRNPH1P31943 449 aaKnown RBP19.34■□□□□ 0.69
SMPD4-202ENST00000409031 PTPROQ16827 1216 aa19.34■□□□□ 0.69
SMPD4-202ENST00000409031 PAGE5Q96GU1 130 aa19.34■□□□□ 0.69
SMPD4-202ENST00000409031 DENND2AQ9ULE3 1009 aa19.34■□□□□ 0.69
SMPD4-202ENST00000409031 CEP170Q5SW79 1584 aa19.33■□□□□ 0.69
SMPD4-202ENST00000409031 RASGRF2O14827 1237 aa19.33■□□□□ 0.69
SMPD4-202ENST00000409031 PTPREP23469 700 aa19.33■□□□□ 0.69
SMPD4-202ENST00000409031 DZIP3Q86Y13 1208 aaKnown RBP19.33■□□□□ 0.69
SMPD4-202ENST00000409031 CREB3O43889 395 aa19.33■□□□□ 0.69
SMPD4-202ENST00000409031 FTCDO95954 541 aa19.33■□□□□ 0.69
SMPD4-202ENST00000409031 LMNAP02545 664 aaKnown RBP19.33■□□□□ 0.69
SMPD4-202ENST00000409031 ADCY2Q08462 1091 aa19.33■□□□□ 0.69
SMPD4-202ENST00000409031 ADAT2Q7Z6V5 191 aaKnown RBP19.33■□□□□ 0.69
SMPD4-202ENST00000409031 SLC39A2Q9NP94 309 aa19.33■□□□□ 0.69
SMPD4-202ENST00000409031 AGTPBP1Q9UPW5 1226 aa19.33■□□□□ 0.69
SMPD4-202ENST00000409031 MAST3O60307 1309 aa19.33■□□□□ 0.68
SMPD4-202ENST00000409031 CCNE1P24864 410 aa19.33■□□□□ 0.68
SMPD4-202ENST00000409031 CCDC14Q49A88 953 aa19.33■□□□□ 0.68
SMPD4-202ENST00000409031 C10orf76Q5T2E6 689 aa19.33■□□□□ 0.68
SMPD4-202ENST00000409031 FUT8Q9BYC5 575 aa19.33■□□□□ 0.68
SMPD4-202ENST00000409031 METTL14Q9HCE5 456 aaKnown RBP19.33■□□□□ 0.68
SMPD4-202ENST00000409031 UHRF1BP1LA0JNW5 1464 aa19.33■□□□□ 0.68
SMPD4-202ENST00000409031 SCG2P13521 617 aa19.33■□□□□ 0.68
SMPD4-202ENST00000409031 KRT5P13647 590 aa19.33■□□□□ 0.68
SMPD4-202ENST00000409031 IRAK1P51617 712 aa19.33■□□□□ 0.68
SMPD4-202ENST00000409031 PDE1CQ14123 709 aaPredicted RBP19.33■□□□□ 0.68
SMPD4-202ENST00000409031 GALNT17Q6IS24 598 aa19.33■□□□□ 0.68
SMPD4-202ENST00000409031 GSPT2Q8IYD1 628 aaKnown RBP19.33■□□□□ 0.68
SMPD4-202ENST00000409031 DNM3Q9UQ16 869 aa19.33■□□□□ 0.68
SMPD4-202ENST00000409031 MMEP08473 750 aa19.32■□□□□ 0.68
SMPD4-202ENST00000409031 OR52Z1P0C646 297 aa19.32■□□□□ 0.68
SMPD4-202ENST00000409031 PHBP35232 272 aa19.32■□□□□ 0.68
SMPD4-202ENST00000409031 PDCD7Q8N8D1 485 aaKnown RBP19.32■□□□□ 0.68
SMPD4-202ENST00000409031 PSMD1Q99460 953 aa19.32■□□□□ 0.68
SMPD4-202ENST00000409031 EPN3Q9H201 632 aa19.32■□□□□ 0.68
SMPD4-202ENST00000409031 ATP5HO75947 161 aa19.32■□□□□ 0.68
SMPD4-202ENST00000409031 PPP2R2AP63151 447 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms