RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 CYP39A1Q9NYL5 469 aa10.63□□□□□ -0.71
SNORD88A-201ENST00000408314 TACC3Q9Y6A5 838 aa10.63□□□□□ -0.71
SNORD88A-201ENST00000408314 SYNRGQ9UMZ2 1314 aa10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 DHX16O60231 1041 aaKnown RBP10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 ZEB2O60315 1214 aa10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 PGK1P00558 417 aa10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 PARP1P09874 1014 aaKnown RBP10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 C6orf222P0C671 652 aaPredicted RBP10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 TAL1P17542 331 aaPredicted RBP10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 CHMLP26374 656 aa10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 PDE4AP27815 886 aa10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 SLC16A2P36021 539 aa10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 ACLYP53396 1101 aa10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 IRX6P78412 446 aaPredicted RBP10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 CCDC144BQ3MJ40 725 aa10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 IFIT1BQ5T764 474 aaKnown RBP10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 GPR153Q6NV75 609 aa10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 KIAA1211Q6ZU35 1233 aa10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 NOL8Q76FK4 1167 aaKnown RBP10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 CHMP4CQ96CF2 233 aa10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 AP5M1Q9H0R1 490 aa10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 UPF3AQ9H1J1 476 aaKnown RBP10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 STARD7Q9NQZ5 370 aa10.62□□□□□ -0.71
SNORD88A-201ENST00000408314 ELP1O95163 1332 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 ABCB11O95342 1321 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 A0A1W2PQ45 241 aaPredicted RBP10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 A0A1W2PQY0 241 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 PTPDC1A2A3K4 754 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 DCDC2CA8MYV0 355 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 CABYRO75952 493 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 GJA9P57773 515 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 CNTN2Q02246 1040 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 TNFAIP2Q03169 654 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 LRIT3Q3SXY7 679 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 TRIM60Q495X7 471 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 BRDTQ58F21 947 aaPredicted RBP10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 IQSEC1Q6DN90 963 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 TTBK2Q6IQ55 1244 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 RNF207Q6ZRF8 634 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 MCF2L2Q86YR7 1114 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 ENAHQ8N8S7 591 aaPredicted RBP10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 RGS22Q8NE09 1264 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 DNERQ8NFT8 737 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 NCOA7Q8NI08 942 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 FERMT2Q96AC1 680 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 FGD4Q96M96 766 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 TOX2Q96NM4 488 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 ZKSCAN3Q9BRR0 538 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 PRDM5Q9NQX1 630 aaPredicted RBP10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 ZSWIM5Q9P217 1185 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 Q9Y3F1 56 aa10.61□□□□□ -0.71
SNORD88A-201ENST00000408314 SOWAHBA6NEL2 793 aa10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 TLR3O15455 904 aaKnown RBP10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 SGSM2O43147 1006 aa10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 CLTBP09497 229 aa10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 ALDH5A1P51649 535 aaPredicted RBP10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 SNAP25P60880 206 aa10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 NKX3-2P78367 333 aa10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 MDM2Q00987 491 aaPredicted RBP10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 PDE4DQ08499 809 aa10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 BAATQ14032 418 aaPredicted RBP10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 CDC37Q16543 378 aaPredicted RBP10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 MUM1L1Q5H9M0 696 aa10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 GNASQ5JWF2 1037 aa10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 CASC1Q6TDU7 716 aa10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 CENPQQ7L2Z9 268 aaPredicted RBP10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 RASGRP2Q7LDG7 609 aa10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 TLK2Q86UE8 772 aa10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 KLHDC9Q8NEP7 349 aa10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 MORC4Q8TE76 937 aa10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 SMCHD1A6NHR9 2005 aa10.6□□□□□ -0.71
SNORD88A-201ENST00000408314 MCM3APO60318 1980 aa10.59□□□□□ -0.71
SNORD88A-201ENST00000408314 A0A0U1RQG5 324 aaPredicted RBP10.59□□□□□ -0.71
SNORD88A-201ENST00000408314 NFIBO00712 420 aa10.59□□□□□ -0.71
SNORD88A-201ENST00000408314 NKRFO15226 690 aaKnown RBP eCLIP10.59□□□□□ -0.71
SNORD88A-201ENST00000408314 TLE2Q04725 743 aa10.59□□□□□ -0.71
SNORD88A-201ENST00000408314 KCNA10Q16322 511 aa10.59□□□□□ -0.71
SNORD88A-201ENST00000408314 ANKRD33Q7Z3H0 272 aa10.59□□□□□ -0.71
SNORD88A-201ENST00000408314 VTI1AQ96AJ9 217 aa10.59□□□□□ -0.71
SNORD88A-201ENST00000408314 MTA3Q9BTC8 594 aa10.59□□□□□ -0.71
SNORD88A-201ENST00000408314 KATNBL1Q9H079 304 aa10.59□□□□□ -0.71
SNORD88A-201ENST00000408314 PDLIM7Q9NR12 457 aa10.59□□□□□ -0.71
SNORD88A-201ENST00000408314 MRPL11Q9Y3B7 192 aaKnown RBP10.59□□□□□ -0.71
SNORD88A-201ENST00000408314 LRRC37A2A6NM11 1700 aa10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 IFIT3O14879 490 aaKnown RBP10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 PQBP1O60828 265 aaKnown RBP10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 ASGR1P07306 291 aa10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 CYP21A2P08686 494 aa10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 GOLGA8HP0CJ92 632 aa10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 RAG1P15918 1043 aa10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 CALML3P27482 149 aa10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 CPT1AP50416 773 aa10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 RPS6P62753 249 aaKnown RBP10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 WTAPQ15007 396 aa10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 FSCN1Q16658 493 aaKnown RBP10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 USH1GQ495M9 461 aa10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 CCSAPQ6IQ19 270 aaPredicted RBP10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 FBXO11Q86XK2 927 aa10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 FBXO16Q8IX29 292 aaPredicted RBP10.58□□□□□ -0.72
SNORD88A-201ENST00000408314 SAMD3Q8N6K7 520 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms