RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 TMTC3Q6ZXV5 915 aa18.48■□□□□ 0.55
GDPD3-202ENST00000406256 CMTR1Q8N1G2 835 aaKnown RBP18.48■□□□□ 0.55
GDPD3-202ENST00000406256 FANCBQ8NB91 859 aa18.48■□□□□ 0.55
GDPD3-202ENST00000406256 PIGSQ96S52 555 aa18.48■□□□□ 0.55
GDPD3-202ENST00000406256 CWC22Q9HCG8 908 aaKnown RBP18.48■□□□□ 0.55
GDPD3-202ENST00000406256 VAT1LQ9HCJ6 419 aa18.48■□□□□ 0.55
GDPD3-202ENST00000406256 FBXO40Q9UH90 709 aa18.48■□□□□ 0.55
GDPD3-202ENST00000406256 CYP46A1Q9Y6A2 500 aa18.48■□□□□ 0.55
GDPD3-202ENST00000406256 OPLAHO14841 1288 aa18.47■□□□□ 0.55
GDPD3-202ENST00000406256 ZBTB5O15062 677 aa18.47■□□□□ 0.55
GDPD3-202ENST00000406256 HMGCRP04035 888 aa18.47■□□□□ 0.55
GDPD3-202ENST00000406256 CALM1P0DP23 149 aa18.47■□□□□ 0.55
GDPD3-202ENST00000406256 CALM2P0DP24 149 aa18.47■□□□□ 0.55
GDPD3-202ENST00000406256 CALM3P0DP25 149 aa18.47■□□□□ 0.55
GDPD3-202ENST00000406256 SMARCA1P28370 1054 aa18.47■□□□□ 0.55
GDPD3-202ENST00000406256 RCAN1P53805 252 aa18.47■□□□□ 0.55
GDPD3-202ENST00000406256 KCTD2Q14681 263 aa18.47■□□□□ 0.55
GDPD3-202ENST00000406256 CTCFLQ8NI51 663 aaPredicted RBP18.47■□□□□ 0.55
GDPD3-202ENST00000406256 MAML3Q96JK9 1138 aa18.47■□□□□ 0.55
GDPD3-202ENST00000406256 ZBTB43O43298 467 aa18.46■□□□□ 0.55
GDPD3-202ENST00000406256 EIF5BO60841 1220 aaKnown RBP18.46■□□□□ 0.55
GDPD3-202ENST00000406256 KIF5BP33176 963 aa18.46■□□□□ 0.55
GDPD3-202ENST00000406256 USH1GQ495M9 461 aa18.46■□□□□ 0.55
GDPD3-202ENST00000406256 FAM133AQ8N9E0 248 aa18.46■□□□□ 0.55
GDPD3-202ENST00000406256 CNTNAP5Q8WYK1 1306 aa18.46■□□□□ 0.55
GDPD3-202ENST00000406256 TNRC18O15417 2968 aaPredicted RBP18.46■□□□□ 0.55
GDPD3-202ENST00000406256 OLFML2BQ68BL8 750 aa18.45■□□□□ 0.54
GDPD3-202ENST00000406256 DPP9Q86TI2 863 aa18.45■□□□□ 0.54
GDPD3-202ENST00000406256 PURBQ96QR8 312 aaKnown RBP18.45■□□□□ 0.54
GDPD3-202ENST00000406256 UNC93B1Q9H1C4 597 aa18.45■□□□□ 0.54
GDPD3-202ENST00000406256 ALDH8A1Q9H2A2 487 aaPredicted RBP18.45■□□□□ 0.54
GDPD3-202ENST00000406256 CYP39A1Q9NYL5 469 aa18.45■□□□□ 0.54
GDPD3-202ENST00000406256 DIS3Q9Y2L1 958 aaKnown RBP18.45■□□□□ 0.54
GDPD3-202ENST00000406256 DNAH12Q6ZR08 3092 aa18.45■□□□□ 0.54
GDPD3-202ENST00000406256 SOWAHBA6NEL2 793 aa18.44■□□□□ 0.54
GDPD3-202ENST00000406256 GOLGA8AA7E2F4 631 aa18.44■□□□□ 0.54
GDPD3-202ENST00000406256 GOLGA8BA8MQT2 603 aa18.44■□□□□ 0.54
GDPD3-202ENST00000406256 DHX16O60231 1041 aaKnown RBP18.44■□□□□ 0.54
GDPD3-202ENST00000406256 CNTN2Q02246 1040 aa18.44■□□□□ 0.54
GDPD3-202ENST00000406256 CACNB2Q08289 660 aaPredicted RBP18.44■□□□□ 0.54
GDPD3-202ENST00000406256 RTN1Q16799 776 aa18.44■□□□□ 0.54
GDPD3-202ENST00000406256 FBXO11Q86XK2 927 aa18.44■□□□□ 0.54
GDPD3-202ENST00000406256 HOMER1Q86YM7 354 aa18.44■□□□□ 0.54
GDPD3-202ENST00000406256 TRPV1Q8NER1 839 aa18.44■□□□□ 0.54
GDPD3-202ENST00000406256 TBC1D5Q92609 795 aa18.44■□□□□ 0.54
GDPD3-202ENST00000406256 ABCB11O95342 1321 aa18.43■□□□□ 0.54
GDPD3-202ENST00000406256 PNMA6FA0A0J9YX94 578 aa18.43■□□□□ 0.54
GDPD3-202ENST00000406256 POTEFA5A3E0 1075 aa18.43■□□□□ 0.54
GDPD3-202ENST00000406256 CCL5P13501 91 aa18.43■□□□□ 0.54
GDPD3-202ENST00000406256 PRKAR2AP13861 404 aaKnown RBP18.43■□□□□ 0.54
GDPD3-202ENST00000406256 PDIA3P30101 505 aaKnown RBP18.43■□□□□ 0.54
GDPD3-202ENST00000406256 CYP2C19P33261 490 aa18.43■□□□□ 0.54
GDPD3-202ENST00000406256 ADD1P35611 737 aaKnown RBP18.43■□□□□ 0.54
GDPD3-202ENST00000406256 RBM25P49756 843 aaKnown RBP18.43■□□□□ 0.54
GDPD3-202ENST00000406256 GNAQP50148 359 aa18.43■□□□□ 0.54
GDPD3-202ENST00000406256 GHRHRQ02643 423 aa18.43■□□□□ 0.54
GDPD3-202ENST00000406256 SLC30A10Q6XR72 485 aa18.43■□□□□ 0.54
GDPD3-202ENST00000406256 TRMT44Q8IYL2 757 aaKnown RBP18.43■□□□□ 0.54
GDPD3-202ENST00000406256 ANKRD35Q8N283 1001 aa18.43■□□□□ 0.54
GDPD3-202ENST00000406256 LZTS2Q9BRK4 669 aa18.43■□□□□ 0.54
GDPD3-202ENST00000406256 LARP6Q9BRS8 491 aaKnown RBP18.43■□□□□ 0.54
GDPD3-202ENST00000406256 PAK6Q9NQU5 681 aaPredicted RBP18.43■□□□□ 0.54
GDPD3-202ENST00000406256 PDRG1Q9NUG6 133 aa18.43■□□□□ 0.54
GDPD3-202ENST00000406256 PNMA2Q9UL42 364 aa18.43■□□□□ 0.54
GDPD3-202ENST00000406256 PFASO15067 1338 aa18.43■□□□□ 0.54
GDPD3-202ENST00000406256 CCDC85CA6NKD9 419 aa18.42■□□□□ 0.54
GDPD3-202ENST00000406256 MYCP01106 439 aaPredicted RBP18.42■□□□□ 0.54
GDPD3-202ENST00000406256 CYBAP13498 195 aa18.42■□□□□ 0.54
GDPD3-202ENST00000406256 NTRK3Q16288 839 aa18.42■□□□□ 0.54
GDPD3-202ENST00000406256 MAMDC4Q6UXC1 1216 aa18.42■□□□□ 0.54
GDPD3-202ENST00000406256 NSMFQ6X4W1 530 aa18.42■□□□□ 0.54
GDPD3-202ENST00000406256 ZNF467Q7Z7K2 595 aaPredicted RBP18.42■□□□□ 0.54
GDPD3-202ENST00000406256 DDX11Q96FC9 970 aa18.42■□□□□ 0.54
GDPD3-202ENST00000406256 AMNQ9BXJ7 453 aa18.42■□□□□ 0.54
GDPD3-202ENST00000406256 RBM28Q9NW13 759 aaKnown RBP18.42■□□□□ 0.54
GDPD3-202ENST00000406256 DDX49Q9Y6V7 483 aaKnown RBP18.42■□□□□ 0.54
GDPD3-202ENST00000406256 hCG_1642624A0A1W2PR95 340 aa18.42■□□□□ 0.54
GDPD3-202ENST00000406256 METAP2P50579 478 aaKnown RBP eCLIP18.42■□□□□ 0.54
GDPD3-202ENST00000406256 RPS6P62753 249 aaKnown RBP18.42■□□□□ 0.54
GDPD3-202ENST00000406256 FGD1P98174 961 aa18.42■□□□□ 0.54
GDPD3-202ENST00000406256 BAATQ14032 418 aaPredicted RBP18.42■□□□□ 0.54
GDPD3-202ENST00000406256 SYNE3Q6ZMZ3 975 aa18.42■□□□□ 0.54
GDPD3-202ENST00000406256 CCDC82Q8N4S0 544 aa18.42■□□□□ 0.54
GDPD3-202ENST00000406256 RGS22Q8NE09 1264 aa18.42■□□□□ 0.54
GDPD3-202ENST00000406256 PIBF1Q8WXW3 757 aa18.42■□□□□ 0.54
GDPD3-202ENST00000406256 SHISA4Q96DD7 197 aa18.42■□□□□ 0.54
GDPD3-202ENST00000406256 TINF2Q9BSI4 451 aa18.42■□□□□ 0.54
GDPD3-202ENST00000406256 C22orf23Q9BZE7 217 aa18.42■□□□□ 0.54
GDPD3-202ENST00000406256 COL20A1Q9P218 1284 aa18.42■□□□□ 0.54
GDPD3-202ENST00000406256 KIAA1217Q5T5P2 1943 aa18.41■□□□□ 0.54
GDPD3-202ENST00000406256 RPTORQ8N122 1335 aa18.41■□□□□ 0.54
GDPD3-202ENST00000406256 SNAI1O95863 264 aaPredicted RBP18.41■□□□□ 0.54
GDPD3-202ENST00000406256 CCND3P30281 292 aaPredicted RBP18.41■□□□□ 0.54
GDPD3-202ENST00000406256 AK2P54819 239 aa18.41■□□□□ 0.54
GDPD3-202ENST00000406256 SOX10P56693 466 aa18.41■□□□□ 0.54
GDPD3-202ENST00000406256 UBXN2AP68543 259 aa18.41■□□□□ 0.54
GDPD3-202ENST00000406256 ZNF274Q96GC6 653 aaPredicted RBP18.41■□□□□ 0.54
GDPD3-202ENST00000406256 BACH2Q9BYV9 841 aa18.41■□□□□ 0.54
GDPD3-202ENST00000406256 KATNBL1Q9H079 304 aa18.41■□□□□ 0.54
GDPD3-202ENST00000406256 NCOA5Q9HCD5 579 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms