RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 H0YHG0 523 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 RPS6KA4O75676 772 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 SYF2O95926 243 aaKnown RBP16.78■□□□□ 0.28
ATG4B-206ENST00000405546 CAGE1Q8TC20 777 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 EYA3Q99504 573 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 MTRQ99707 1265 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 TMEM47Q9BQJ4 181 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 SMCO2A6NFE2 343 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 ZNF185O15231 689 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 MFAP3LO75121 409 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 PPFIA4O75335 1185 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 SSBP05455 408 aaKnown RBP eCLIP16.78■□□□□ 0.28
ATG4B-206ENST00000405546 IDEP14735 1019 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 BTDP43251 543 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 GNAQP50148 359 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 FAM196AQ6ZSG2 479 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 ZNF804AQ7Z570 1209 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 CCDC47Q96A33 483 aaKnown RBP16.78■□□□□ 0.28
ATG4B-206ENST00000405546 FRMPD2Q68DX3 1309 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-206ENST00000405546 GYPCP04921 128 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 LDHCP07864 332 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 TEX2Q8IWB9 1127 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 BCAS4Q8TDM0 211 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 CHP1Q99653 195 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 CRACR2AQ9BSW2 395 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 G3V3G9 751 aa16.77■□□□□ 0.28
ATG4B-206ENST00000405546 TRIM21P19474 475 aaKnown RBP16.77■□□□□ 0.28
ATG4B-206ENST00000405546 MTIF2P46199 727 aaKnown RBP16.77■□□□□ 0.28
ATG4B-206ENST00000405546 ATP1A2P50993 1020 aa16.77■□□□□ 0.28
ATG4B-206ENST00000405546 SF3A3Q12874 501 aaKnown RBP eCLIP16.77■□□□□ 0.289e-7■■■□□ 19.2
ATG4B-206ENST00000405546 DCAF8Q5TAQ9 597 aa16.77■□□□□ 0.28
ATG4B-206ENST00000405546 ELOA2Q8IYF1 753 aaPredicted RBP16.77■□□□□ 0.28
ATG4B-206ENST00000405546 CCDC148Q8NFR7 591 aa16.77■□□□□ 0.28
ATG4B-206ENST00000405546 SPATA20Q8TB22 786 aa16.77■□□□□ 0.28
ATG4B-206ENST00000405546 HPS3Q969F9 1004 aa16.77■□□□□ 0.28
ATG4B-206ENST00000405546 MMS19Q96T76 1030 aa16.77■□□□□ 0.28
ATG4B-206ENST00000405546 C4AP0C0L4 1744 aa16.77■□□□□ 0.28
ATG4B-206ENST00000405546 C4BP0C0L5 1744 aa16.77■□□□□ 0.28
ATG4B-206ENST00000405546 TULP1O00294 542 aaPredicted RBP16.77■□□□□ 0.27
ATG4B-206ENST00000405546 PSMA7O14818 248 aa16.77■□□□□ 0.27
ATG4B-206ENST00000405546 DNA2P51530 1060 aa16.77■□□□□ 0.27
ATG4B-206ENST00000405546 PDE4DQ08499 809 aa16.77■□□□□ 0.27
ATG4B-206ENST00000405546 KCTD16Q68DU8 428 aa16.77■□□□□ 0.27
ATG4B-206ENST00000405546 CDK5RAP3Q96JB5 506 aa16.77■□□□□ 0.27
ATG4B-206ENST00000405546 JPH2Q9BR39 696 aaPredicted RBP16.77■□□□□ 0.27
ATG4B-206ENST00000405546 FAM169AQ9Y6X4 670 aa16.77■□□□□ 0.27
ATG4B-206ENST00000405546 SHANK3Q9BYB0 1731 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 ZEB2O60315 1214 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 PARP1P09874 1014 aaKnown RBP16.76■□□□□ 0.27
ATG4B-206ENST00000405546 LONP1P36776 959 aaKnown RBP16.76■□□□□ 0.27
ATG4B-206ENST00000405546 TCP11X2Q5H9J9 407 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 ZNF658Q5TYW1 1059 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-206ENST00000405546 SH3RF1Q7Z6J0 888 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 TNFRSF25Q93038 417 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 PANX2Q96RD6 677 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 DISC1Q9NRI5 854 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 MKRN1Q9UHC7 482 aaKnown RBP16.76■□□□□ 0.27
ATG4B-206ENST00000405546 MYO6Q9UM54 1294 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 PAPPAQ13219 1627 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 MYO1FO00160 1098 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 IPO7O95373 1038 aaKnown RBP16.76■□□□□ 0.27
ATG4B-206ENST00000405546 TRAPPC10P48553 1259 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 SPAG1Q07617 926 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 MFSD14BQ5SR56 506 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 MMS22LQ6ZRQ5 1243 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 DYMQ7RTS9 669 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 DGKHQ86XP1 1220 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 CSGALNACT2Q8N6G5 542 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 GPCPD1Q9NPB8 672 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 LUC7L2Q9Y383 392 aaKnown RBP16.76■□□□□ 0.27
ATG4B-206ENST00000405546 MPHOSPH10O00566 681 aaKnown RBP16.76■□□□□ 0.27
ATG4B-206ENST00000405546 ERVK-24P63145 666 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 GSTO1P78417 241 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 KIAA1328Q86T90 577 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 PCDHA6Q9UN73 950 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 PCDHA8Q9Y5H6 950 aa16.76■□□□□ 0.27
ATG4B-206ENST00000405546 SLC10A5Q5PT55 438 aa16.75■□□□□ 0.27
ATG4B-206ENST00000405546 PDXDC2PQ6P474 469 aa16.75■□□□□ 0.27
ATG4B-206ENST00000405546 CABP7Q86V35 215 aa16.75■□□□□ 0.27
ATG4B-206ENST00000405546 CLEC10AQ8IUN9 316 aa16.75■□□□□ 0.27
ATG4B-206ENST00000405546 MSANTD4Q8NCY6 345 aa16.75■□□□□ 0.27
ATG4B-206ENST00000405546 EXOC1Q9NV70 894 aa16.75■□□□□ 0.27
ATG4B-206ENST00000405546 SMARCAL1Q9NZC9 954 aa16.75■□□□□ 0.27
ATG4B-206ENST00000405546 RWDD2AQ9UIY3 292 aa16.75■□□□□ 0.27
ATG4B-206ENST00000405546 RAB21Q9UL25 225 aa16.75■□□□□ 0.27
ATG4B-206ENST00000405546 CAPN7Q9Y6W3 813 aa16.75■□□□□ 0.27
ATG4B-206ENST00000405546 XIRP1Q702N8 1843 aaKnown RBP16.75■□□□□ 0.27
ATG4B-206ENST00000405546 CYTH3O43739 400 aa16.75■□□□□ 0.27
ATG4B-206ENST00000405546 MCTP2Q6DN12 878 aa16.75■□□□□ 0.27
ATG4B-206ENST00000405546 LRRC47Q8N1G4 583 aaKnown RBP16.75■□□□□ 0.27
ATG4B-206ENST00000405546 PIGSQ96S52 555 aa16.75■□□□□ 0.27
ATG4B-206ENST00000405546 PYM1Q9BRP8 204 aaKnown RBP16.75■□□□□ 0.27
ATG4B-206ENST00000405546 ZNF287Q9HBT7 754 aa16.75■□□□□ 0.27
ATG4B-206ENST00000405546 B4DLN1 442 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 HNRNPH1P31943 449 aaKnown RBP16.74■□□□□ 0.27
ATG4B-206ENST00000405546 PDE6BP35913 854 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 PMS1P54277 932 aaKnown RBP16.74■□□□□ 0.27
ATG4B-206ENST00000405546 SLC7A5Q01650 507 aa16.74■□□□□ 0.27
ATG4B-206ENST00000405546 EZH2Q15910 746 aaKnown RBP16.74■□□□□ 0.27
ATG4B-206ENST00000405546 CDKAL1Q5VV42 579 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms