RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 CCPG1Q9ULG6 757 aa14.2□□□□□ -0.14
LINC00339-201ENST00000404210 MRPL11Q9Y3B7 192 aaKnown RBP14.2□□□□□ -0.14
LINC00339-201ENST00000404210 SMCHD1A6NHR9 2005 aa14.2□□□□□ -0.14
LINC00339-201ENST00000404210 A0A0G2JMZ2 1700 aa14.19□□□□□ -0.14
LINC00339-201ENST00000404210 STXBP3O00186 592 aa14.19□□□□□ -0.14
LINC00339-201ENST00000404210 BCRP11274 1271 aa14.19□□□□□ -0.14
LINC00339-201ENST00000404210 PDCP20941 246 aa14.19□□□□□ -0.14
LINC00339-201ENST00000404210 CCNA1P78396 465 aa14.19□□□□□ -0.14
LINC00339-201ENST00000404210 MAP2K1Q02750 393 aaPredicted RBP14.19□□□□□ -0.14
LINC00339-201ENST00000404210 CRHR2Q13324 411 aa14.19□□□□□ -0.14
LINC00339-201ENST00000404210 PLS1Q14651 629 aa14.19□□□□□ -0.14
LINC00339-201ENST00000404210 FAM110CQ1W6H9 321 aa14.19□□□□□ -0.14
LINC00339-201ENST00000404210 LARP1BQ659C4 914 aaKnown RBP14.19□□□□□ -0.14
LINC00339-201ENST00000404210 SNRNP48Q6IEG0 339 aaKnown RBP14.19□□□□□ -0.14
LINC00339-201ENST00000404210 PPP1R18Q6NYC8 613 aa14.19□□□□□ -0.14
LINC00339-201ENST00000404210 HEATR3Q7Z4Q2 680 aa14.19□□□□□ -0.14
LINC00339-201ENST00000404210 TEX2Q8IWB9 1127 aa14.19□□□□□ -0.14
LINC00339-201ENST00000404210 SAMD3Q8N6K7 520 aa14.19□□□□□ -0.14
LINC00339-201ENST00000404210 SHCBP1Q8NEM2 672 aa14.19□□□□□ -0.14
LINC00339-201ENST00000404210 CHST13Q8NET6 341 aa14.19□□□□□ -0.14
LINC00339-201ENST00000404210 AIFM3Q96NN9 605 aa14.19□□□□□ -0.14
LINC00339-201ENST00000404210 THSD7BQ9C0I4 1608 aa14.19□□□□□ -0.14
LINC00339-201ENST00000404210 ESYT2A0FGR8 921 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 SMCO2A6NFE2 343 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 TRPA1O75762 1119 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 ALAS1P13196 640 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 NAPAP54920 295 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 TRIM29Q14134 588 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 USH1GQ495M9 461 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 GALNT17Q6IS24 598 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 CCDC148Q8NFR7 591 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 FBXO18Q8NFZ0 1043 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 GPKOWQ92917 476 aaPredicted RBP eCLIP14.18□□□□□ -0.14
LINC00339-201ENST00000404210 C8orf76Q96K31 380 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 TRERF1Q96PN7 1200 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 MOV10L1Q9BXT6 1211 aaKnown RBP14.18□□□□□ -0.14
LINC00339-201ENST00000404210 ZMYND12Q9H0C1 365 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 GLT8D2Q9H1C3 349 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 MROH8Q9H579 483 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 SAGE1Q9NXZ1 904 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 MAP3K20Q9NYL2 800 aaKnown RBP14.18□□□□□ -0.14
LINC00339-201ENST00000404210 VPS54Q9P1Q0 977 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 FBXO40Q9UH90 709 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 CPA4Q9UI42 421 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 RIPK3Q9Y572 518 aa14.18□□□□□ -0.14
LINC00339-201ENST00000404210 PEX10O60683 326 aa14.17□□□□□ -0.14
LINC00339-201ENST00000404210 GNA11P29992 359 aa14.17□□□□□ -0.14
LINC00339-201ENST00000404210 MRPL12P52815 198 aaKnown RBP14.17□□□□□ -0.14
LINC00339-201ENST00000404210 NLRP5P59047 1200 aa14.17□□□□□ -0.14
LINC00339-201ENST00000404210 KRT40Q6A162 431 aa14.17□□□□□ -0.14
LINC00339-201ENST00000404210 TYW1BQ6NUM6 668 aa14.17□□□□□ -0.14
LINC00339-201ENST00000404210 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.17□□□□□ -0.14
LINC00339-201ENST00000404210 MCF2L2Q86YR7 1114 aa14.17□□□□□ -0.14
LINC00339-201ENST00000404210 PHF20Q9BVI0 1012 aa14.17□□□□□ -0.14
LINC00339-201ENST00000404210 C6orf50Q9HD87 102 aa14.17□□□□□ -0.14
LINC00339-201ENST00000404210 TBC1D8O95759 1140 aa14.16□□□□□ -0.14
LINC00339-201ENST00000404210 ERCC3P19447 782 aa14.16□□□□□ -0.14
LINC00339-201ENST00000404210 CALML3P27482 149 aa14.16□□□□□ -0.14
LINC00339-201ENST00000404210 MUM1L1Q5H9M0 696 aa14.16□□□□□ -0.14
LINC00339-201ENST00000404210 NCAPG2Q86XI2 1143 aa14.16□□□□□ -0.14
LINC00339-201ENST00000404210 CLEC4DQ8WXI8 215 aa14.16□□□□□ -0.14
LINC00339-201ENST00000404210 SHISA4Q96DD7 197 aa14.16□□□□□ -0.14
LINC00339-201ENST00000404210 R3HDMLQ9H3Y0 253 aa14.16□□□□□ -0.14
LINC00339-201ENST00000404210 ACAD9Q9H845 621 aa14.16□□□□□ -0.14
LINC00339-201ENST00000404210 PSTPIP2Q9H939 334 aa14.16□□□□□ -0.14
LINC00339-201ENST00000404210 RIC8AQ9NPQ8 531 aa14.16□□□□□ -0.14
LINC00339-201ENST00000404210 RNF146Q9NTX7 359 aa14.16□□□□□ -0.14
LINC00339-201ENST00000404210 STRNO43815 780 aa14.15□□□□□ -0.14
LINC00339-201ENST00000404210 MMP1P03956 469 aa14.15□□□□□ -0.14
LINC00339-201ENST00000404210 SYT1P21579 422 aa14.15□□□□□ -0.14
LINC00339-201ENST00000404210 MAPK4P31152 587 aa14.15□□□□□ -0.14
LINC00339-201ENST00000404210 GHRHRQ02643 423 aa14.15□□□□□ -0.14
LINC00339-201ENST00000404210 NOM1Q5C9Z4 860 aaKnown RBP14.15□□□□□ -0.14
LINC00339-201ENST00000404210 DAGLBQ8NCG7 672 aa14.15□□□□□ -0.14
LINC00339-201ENST00000404210 BICD2Q8TD16 824 aa14.15□□□□□ -0.14
LINC00339-201ENST00000404210 CUL5Q93034 780 aa14.15□□□□□ -0.14
LINC00339-201ENST00000404210 BEGAINQ9BUH8 593 aa14.15□□□□□ -0.14
LINC00339-201ENST00000404210 GJB4Q9NTQ9 266 aa14.15□□□□□ -0.14
LINC00339-201ENST00000404210 PCDHA4Q9UN74 947 aa14.15□□□□□ -0.14
LINC00339-201ENST00000404210 KCNJ14Q9UNX9 436 aa14.15□□□□□ -0.14
LINC00339-201ENST00000404210 ZNFX1Q9P2E3 1918 aaKnown RBP14.14□□□□□ -0.15
LINC00339-201ENST00000404210 H3BQV1 296 aa14.14□□□□□ -0.15
LINC00339-201ENST00000404210 GCOM1H8Y6P7 765 aaPredicted RBP14.14□□□□□ -0.15
LINC00339-201ENST00000404210 PIK3CDO00329 1044 aa14.14□□□□□ -0.15
LINC00339-201ENST00000404210 MEIS2O14770 477 aa14.14□□□□□ -0.15
LINC00339-201ENST00000404210 OPLAHO14841 1288 aa14.14□□□□□ -0.15
LINC00339-201ENST00000404210 STX6O43752 255 aa14.14□□□□□ -0.15
LINC00339-201ENST00000404210 POLR2MP0CAP2 368 aa14.14□□□□□ -0.15
LINC00339-201ENST00000404210 TAL1P17542 331 aaPredicted RBP14.14□□□□□ -0.15
LINC00339-201ENST00000404210 ADCY7P51828 1080 aa14.14□□□□□ -0.15
LINC00339-201ENST00000404210 SAFBQ15424 915 aaKnown RBP eCLIP14.14□□□□□ -0.15
LINC00339-201ENST00000404210 IFFO2Q5TF58 517 aa14.14□□□□□ -0.15
LINC00339-201ENST00000404210 MCTP2Q6DN12 878 aa14.14□□□□□ -0.15
LINC00339-201ENST00000404210 CCAR1Q8IX12 1150 aaKnown RBP14.14□□□□□ -0.15
LINC00339-201ENST00000404210 BLIDQ8IZY5 108 aa14.14□□□□□ -0.15
LINC00339-201ENST00000404210 TBC1D5Q92609 795 aa14.14□□□□□ -0.15
LINC00339-201ENST00000404210 PORCNQ9H237 461 aa14.14□□□□□ -0.15
LINC00339-201ENST00000404210 EFCC1Q9HA90 598 aa14.14□□□□□ -0.15
LINC00339-201ENST00000404210 HOMER2Q9NSB8 354 aa14.14□□□□□ -0.15
LINC00339-201ENST00000404210 WBP1LQ9NX94 342 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms