RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 IMMTQ16891 758 aaKnown RBP18.06■□□□□ 0.48
TPM1-207ENST00000403994 LRIT3Q3SXY7 679 aa18.06■□□□□ 0.48
TPM1-207ENST00000403994 NSMFQ6X4W1 530 aa18.06■□□□□ 0.48
TPM1-207ENST00000403994 KLHDC9Q8NEP7 349 aa18.06■□□□□ 0.48
TPM1-207ENST00000403994 LBHD1Q9BQE6 289 aaPredicted RBP18.06■□□□□ 0.48
TPM1-207ENST00000403994 TSEN34Q9BSV6 310 aaKnown RBP18.06■□□□□ 0.48
TPM1-207ENST00000403994 UPF3AQ9H1J1 476 aaKnown RBP18.06■□□□□ 0.48
TPM1-207ENST00000403994 PRDM5Q9NQX1 630 aaPredicted RBP18.06■□□□□ 0.48
TPM1-207ENST00000403994 DDX49Q9Y6V7 483 aaKnown RBP18.06■□□□□ 0.48
TPM1-207ENST00000403994 ASB14A6NK59 587 aa18.05■□□□□ 0.48
TPM1-207ENST00000403994 B4E1Z4 1266 aa18.05■□□□□ 0.48
TPM1-207ENST00000403994 NFIBO00712 420 aa18.05■□□□□ 0.48
TPM1-207ENST00000403994 ACLYP53396 1101 aa18.05■□□□□ 0.48
TPM1-207ENST00000403994 CCSAPQ6IQ19 270 aaPredicted RBP18.05■□□□□ 0.48
TPM1-207ENST00000403994 DGKHQ86XP1 1220 aa18.05■□□□□ 0.48
TPM1-207ENST00000403994 MOXD2PA6NHM9 499 aa18.04■□□□□ 0.48
TPM1-207ENST00000403994 C6orf222P0C671 652 aaPredicted RBP18.04■□□□□ 0.48
TPM1-207ENST00000403994 IRX5P78411 483 aaPredicted RBP18.04■□□□□ 0.48
TPM1-207ENST00000403994 TLE2Q04725 743 aa18.04■□□□□ 0.48
TPM1-207ENST00000403994 GPATCH4Q5T3I0 446 aaKnown RBP18.04■□□□□ 0.48
TPM1-207ENST00000403994 IQCA1Q86XH1 822 aa18.04■□□□□ 0.48
TPM1-207ENST00000403994 ENAHQ8N8S7 591 aaPredicted RBP18.04■□□□□ 0.48
TPM1-207ENST00000403994 PNMA1Q8ND90 353 aa18.04■□□□□ 0.48
TPM1-207ENST00000403994 CTNNA3Q9UI47 895 aa18.04■□□□□ 0.48
TPM1-207ENST00000403994 TNKSO95271 1327 aa18.03■□□□□ 0.48
TPM1-207ENST00000403994 WDR19Q8NEZ3 1342 aa18.03■□□□□ 0.48
TPM1-207ENST00000403994 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.03■□□□□ 0.48
TPM1-207ENST00000403994 TRIM43BA6NCK2 446 aa18.03■□□□□ 0.48
TPM1-207ENST00000403994 PQBP1O60828 265 aaKnown RBP18.03■□□□□ 0.48
TPM1-207ENST00000403994 GJA9P57773 515 aa18.03■□□□□ 0.48
TPM1-207ENST00000403994 KCNA10Q16322 511 aa18.03■□□□□ 0.48
TPM1-207ENST00000403994 SLC30A10Q6XR72 485 aa18.03■□□□□ 0.48
TPM1-207ENST00000403994 SH3RF1Q7Z6J0 888 aa18.03■□□□□ 0.48
TPM1-207ENST00000403994 FBXO16Q8IX29 292 aaPredicted RBP18.03■□□□□ 0.48
TPM1-207ENST00000403994 TRIM43Q96BQ3 446 aaPredicted RBP18.03■□□□□ 0.48
TPM1-207ENST00000403994 PURBQ96QR8 312 aaKnown RBP18.03■□□□□ 0.48
TPM1-207ENST00000403994 ZSCAN10Q96SZ4 725 aaPredicted RBP18.03■□□□□ 0.48
TPM1-207ENST00000403994 STARD7Q9NQZ5 370 aa18.03■□□□□ 0.48
TPM1-207ENST00000403994 CTAGE5O15320 804 aa18.02■□□□□ 0.48
TPM1-207ENST00000403994 CLTBP09497 229 aa18.02■□□□□ 0.48
TPM1-207ENST00000403994 GOLGA8HP0CJ92 632 aa18.02■□□□□ 0.48
TPM1-207ENST00000403994 CCDC178Q5BJE1 867 aa18.02■□□□□ 0.48
TPM1-207ENST00000403994 NUP133Q8WUM0 1156 aa18.02■□□□□ 0.48
TPM1-207ENST00000403994 CLEC4DQ8WXI8 215 aa18.02■□□□□ 0.48
TPM1-207ENST00000403994 CPVLQ9H3G5 476 aa18.02■□□□□ 0.48
TPM1-207ENST00000403994 KAT14Q9H8E8 782 aa18.02■□□□□ 0.48
TPM1-207ENST00000403994 CNNM2Q9H8M5 875 aa18.02■□□□□ 0.48
TPM1-207ENST00000403994 SPC25Q9HBM1 224 aa18.02■□□□□ 0.48
TPM1-207ENST00000403994 CDH23Q9H251 3354 aa18.02■□□□□ 0.47
TPM1-207ENST00000403994 A0A0C4DFX4 3053 aa18.02■□□□□ 0.47
TPM1-207ENST00000403994 EYSQ5T1H1 3165 aa18.01■□□□□ 0.47
TPM1-207ENST00000403994 PTPDC1A2A3K4 754 aa18.01■□□□□ 0.47
TPM1-207ENST00000403994 BAATQ14032 418 aaPredicted RBP18.01■□□□□ 0.47
TPM1-207ENST00000403994 GPR153Q6NV75 609 aa18.01■□□□□ 0.47
TPM1-207ENST00000403994 ANKRD33Q7Z3H0 272 aa18.01■□□□□ 0.47
TPM1-207ENST00000403994 TLK2Q86UE8 772 aa18.01■□□□□ 0.47
TPM1-207ENST00000403994 PCSK9Q8NBP7 692 aaKnown RBP18.01■□□□□ 0.47
TPM1-207ENST00000403994 MORC4Q8TE76 937 aa18.01■□□□□ 0.47
TPM1-207ENST00000403994 ANKS1AQ92625 1134 aa18.01■□□□□ 0.47
TPM1-207ENST00000403994 BADQ92934 168 aa18.01■□□□□ 0.47
TPM1-207ENST00000403994 KRT23Q9C075 422 aa18.01■□□□□ 0.47
TPM1-207ENST00000403994 ZSWIM5Q9P217 1185 aa18.01■□□□□ 0.47
TPM1-207ENST00000403994 PNMA2Q9UL42 364 aa18.01■□□□□ 0.47
TPM1-207ENST00000403994 GNEQ9Y223 722 aaKnown RBP18.01■□□□□ 0.47
TPM1-207ENST00000403994 ASGR1P07306 291 aa18■□□□□ 0.47
TPM1-207ENST00000403994 PTGS1P23219 599 aa18■□□□□ 0.47
TPM1-207ENST00000403994 CHMLP26374 656 aa18■□□□□ 0.47
TPM1-207ENST00000403994 ALDH5A1P51649 535 aaPredicted RBP18■□□□□ 0.47
TPM1-207ENST00000403994 NKX3-2P78367 333 aa18■□□□□ 0.47
TPM1-207ENST00000403994 TNFAIP2Q03169 654 aa18■□□□□ 0.47
TPM1-207ENST00000403994 ASPRV1Q53RT3 343 aa18■□□□□ 0.47
TPM1-207ENST00000403994 EEPD1Q7L9B9 569 aa18■□□□□ 0.47
TPM1-207ENST00000403994 GLT1D1Q96MS3 346 aa18■□□□□ 0.47
TPM1-207ENST00000403994 UBAC1Q9BSL1 405 aa18■□□□□ 0.47
TPM1-207ENST00000403994 VTA1Q9NP79 307 aa18■□□□□ 0.47
TPM1-207ENST00000403994 ELP1O95163 1332 aa17.99■□□□□ 0.47
TPM1-207ENST00000403994 SMPD1P17405 629 aa17.99■□□□□ 0.47
TPM1-207ENST00000403994 ITGB8P26012 769 aa17.99■□□□□ 0.47
TPM1-207ENST00000403994 BEX3Q00994 111 aa17.99■□□□□ 0.47
TPM1-207ENST00000403994 CDC37Q16543 378 aaPredicted RBP17.99■□□□□ 0.47
TPM1-207ENST00000403994 GNASQ5JWF2 1037 aa17.99■□□□□ 0.47
TPM1-207ENST00000403994 TAPT1Q6NXT6 567 aa17.99■□□□□ 0.47
TPM1-207ENST00000403994 NOL8Q76FK4 1167 aaKnown RBP17.99■□□□□ 0.47
TPM1-207ENST00000403994 RUFY2Q8WXA3 655 aa17.99■□□□□ 0.47
TPM1-207ENST00000403994 TOX2Q96NM4 488 aa17.99■□□□□ 0.47
TPM1-207ENST00000403994 UBA5Q9GZZ9 404 aa17.99■□□□□ 0.47
TPM1-207ENST00000403994 PDGFCQ9NRA1 345 aa17.99■□□□□ 0.47
TPM1-207ENST00000403994 ADD3Q9UEY8 706 aaKnown RBP17.99■□□□□ 0.47
TPM1-207ENST00000403994 LOC102724159A0A0B4J2E5 919 aa17.98■□□□□ 0.47
TPM1-207ENST00000403994 A0A0U1RQG5 324 aaPredicted RBP17.98■□□□□ 0.47
TPM1-207ENST00000403994 KIAA0355O15063 1070 aa17.98■□□□□ 0.47
TPM1-207ENST00000403994 CALML3P27482 149 aa17.98■□□□□ 0.47
TPM1-207ENST00000403994 PTH1RQ03431 593 aa17.98■□□□□ 0.47
TPM1-207ENST00000403994 FAAP100Q0VG06 881 aa17.98■□□□□ 0.47
TPM1-207ENST00000403994 PWP2Q15269 919 aaKnown RBP17.98■□□□□ 0.47
TPM1-207ENST00000403994 USH1GQ495M9 461 aa17.98■□□□□ 0.47
TPM1-207ENST00000403994 RNF207Q6ZRF8 634 aa17.98■□□□□ 0.47
TPM1-207ENST00000403994 CHD9Q3L8U1 2897 aa17.98■□□□□ 0.47
TPM1-207ENST00000403994 UNC80Q8N2C7 3258 aa17.98■□□□□ 0.47
TPM1-207ENST00000403994 MROH7Q68CQ1 1323 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms