RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 FGD4Q96M96 766 aa22.35■■□□□ 1.17
RTN4-207ENST00000402434 JAKMIP1Q96N16 626 aaKnown RBP22.35■■□□□ 1.17
RTN4-207ENST00000402434 MYL10Q9BUA6 226 aa22.35■■□□□ 1.17
RTN4-207ENST00000402434 CYP39A1Q9NYL5 469 aa22.35■■□□□ 1.17
RTN4-207ENST00000402434 CYTH3O43739 400 aa22.34■■□□□ 1.17
RTN4-207ENST00000402434 DHX16O60231 1041 aaKnown RBP22.34■■□□□ 1.17
RTN4-207ENST00000402434 CALM1P0DP23 149 aa22.34■■□□□ 1.17
RTN4-207ENST00000402434 CALM2P0DP24 149 aa22.34■■□□□ 1.17
RTN4-207ENST00000402434 CALM3P0DP25 149 aa22.34■■□□□ 1.17
RTN4-207ENST00000402434 KIF5BP33176 963 aa22.34■■□□□ 1.17
RTN4-207ENST00000402434 CNTN2Q02246 1040 aa22.34■■□□□ 1.17
RTN4-207ENST00000402434 CTCFLQ8NI51 663 aaPredicted RBP22.34■■□□□ 1.17
RTN4-207ENST00000402434 TCEANC2Q96MN5 208 aa22.34■■□□□ 1.17
RTN4-207ENST00000402434 MAF1Q9H063 256 aa22.34■■□□□ 1.17
RTN4-207ENST00000402434 NRBP1Q9UHY1 535 aa22.34■■□□□ 1.17
RTN4-207ENST00000402434 SLC12A7Q9Y666 1083 aa22.34■■□□□ 1.17
RTN4-207ENST00000402434 POTEB2H3BUK9 544 aa22.34■■□□□ 1.17
RTN4-207ENST00000402434 NFIBO00712 420 aa22.34■■□□□ 1.17
RTN4-207ENST00000402434 SMARCA1P28370 1054 aa22.34■■□□□ 1.17
RTN4-207ENST00000402434 MLLT1Q03111 559 aaPredicted RBP22.34■■□□□ 1.17
RTN4-207ENST00000402434 LHX8Q68G74 356 aa22.34■■□□□ 1.17
RTN4-207ENST00000402434 BAZ2BQ9UIF8 2168 aaKnown RBP22.34■■□□□ 1.17
RTN4-207ENST00000402434 SYNGAP1Q96PV0 1343 aa22.33■■□□□ 1.17
RTN4-207ENST00000402434 ZBTB5O15062 677 aa22.33■■□□□ 1.16
RTN4-207ENST00000402434 PSMA5P28066 241 aa22.33■■□□□ 1.16
RTN4-207ENST00000402434 APOA5Q6Q788 366 aa22.33■■□□□ 1.16
RTN4-207ENST00000402434 BLOC1S2Q6QNY1 142 aa22.33■■□□□ 1.16
RTN4-207ENST00000402434 NSMFQ6X4W1 530 aa22.33■■□□□ 1.16
RTN4-207ENST00000402434 FBXL16Q8N461 479 aa22.33■■□□□ 1.16
RTN4-207ENST00000402434 RGS22Q8NE09 1264 aa22.33■■□□□ 1.16
RTN4-207ENST00000402434 MKI67P46013 3256 aaKnown RBP22.32■■□□□ 1.16
RTN4-207ENST00000402434 TFRCP02786 760 aaKnown RBP22.32■■□□□ 1.16
RTN4-207ENST00000402434 CPA1P15085 419 aa22.32■■□□□ 1.16
RTN4-207ENST00000402434 GNAQP50148 359 aa22.32■■□□□ 1.16
RTN4-207ENST00000402434 USH1GQ495M9 461 aa22.32■■□□□ 1.16
RTN4-207ENST00000402434 FBXO11Q86XK2 927 aa22.32■■□□□ 1.16
RTN4-207ENST00000402434 LZTS2Q9BRK4 669 aa22.32■■□□□ 1.16
RTN4-207ENST00000402434 SPZ1Q9BXG8 430 aa22.32■■□□□ 1.16
RTN4-207ENST00000402434 AMNQ9BXJ7 453 aa22.32■■□□□ 1.16
RTN4-207ENST00000402434 OGDHLQ9ULD0 1010 aa22.32■■□□□ 1.16
RTN4-207ENST00000402434 ABCB11O95342 1321 aa22.32■■□□□ 1.16
RTN4-207ENST00000402434 SOWAHBA6NEL2 793 aa22.31■■□□□ 1.16
RTN4-207ENST00000402434 MSCO60682 206 aa22.31■■□□□ 1.16
RTN4-207ENST00000402434 SNAI1O95863 264 aaPredicted RBP22.31■■□□□ 1.16
RTN4-207ENST00000402434 RPS6KB1P23443 525 aa22.31■■□□□ 1.16
RTN4-207ENST00000402434 BAATQ14032 418 aaPredicted RBP22.31■■□□□ 1.16
RTN4-207ENST00000402434 PRAMEF19Q5SWL8 479 aa22.31■■□□□ 1.16
RTN4-207ENST00000402434 UBE2Q1Q7Z7E8 422 aa22.31■■□□□ 1.16
RTN4-207ENST00000402434 FANCBQ8NB91 859 aa22.31■■□□□ 1.16
RTN4-207ENST00000402434 BRPF3Q9ULD4 1205 aa22.31■■□□□ 1.16
RTN4-207ENST00000402434 SEPT4O43236 478 aa22.3■■□□□ 1.16
RTN4-207ENST00000402434 EIF5BO60841 1220 aaKnown RBP22.3■■□□□ 1.16
RTN4-207ENST00000402434 PPP1R11O60927 126 aaPredicted RBP22.3■■□□□ 1.16
RTN4-207ENST00000402434 RXRAP19793 462 aa22.3■■□□□ 1.16
RTN4-207ENST00000402434 SYNE3Q6ZMZ3 975 aa22.3■■□□□ 1.16
RTN4-207ENST00000402434 PIGSQ96S52 555 aa22.3■■□□□ 1.16
RTN4-207ENST00000402434 AGXT2Q9BYV1 514 aa22.3■■□□□ 1.16
RTN4-207ENST00000402434 TM6SF1Q9BZW5 370 aa22.3■■□□□ 1.16
RTN4-207ENST00000402434 ZSWIM6Q9HCJ5 1215 aa22.3■■□□□ 1.16
RTN4-207ENST00000402434 DDX20Q9UHI6 824 aaKnown RBP22.3■■□□□ 1.16
RTN4-207ENST00000402434 ASTN1O14525 1302 aa22.3■■□□□ 1.16
RTN4-207ENST00000402434 MYH6P13533 1939 aa22.3■■□□□ 1.16
RTN4-207ENST00000402434 PNMA6FA0A0J9YX94 578 aa22.29■■□□□ 1.16
RTN4-207ENST00000402434 CASTP20810 708 aaKnown RBP22.29■■□□□ 1.16
RTN4-207ENST00000402434 CNGA1P29973 690 aa22.29■■□□□ 1.16
RTN4-207ENST00000402434 RPS6P62753 249 aaKnown RBP22.29■■□□□ 1.16
RTN4-207ENST00000402434 RNF207Q6ZRF8 634 aa22.29■■□□□ 1.16
RTN4-207ENST00000402434 CNPY2Q9Y2B0 182 aa22.29■■□□□ 1.16
RTN4-207ENST00000402434 MRPL11Q9Y3B7 192 aaKnown RBP22.29■■□□□ 1.16
RTN4-207ENST00000402434 PTPDC1A2A3K4 754 aa22.28■■□□□ 1.16
RTN4-207ENST00000402434 ZNF865P0CJ78 1059 aaPredicted RBP22.28■■□□□ 1.16
RTN4-207ENST00000402434 RCAN1P53805 252 aa22.28■■□□□ 1.16
RTN4-207ENST00000402434 TRAF1Q13077 416 aa22.28■■□□□ 1.16
RTN4-207ENST00000402434 Q6ZUG5 572 aa22.28■■□□□ 1.16
RTN4-207ENST00000402434 MICU3Q86XE3 530 aa22.28■■□□□ 1.16
RTN4-207ENST00000402434 CCDC144CPQ8IYA2 1237 aa22.28■■□□□ 1.16
RTN4-207ENST00000402434 SRBD1Q8N5C6 995 aaKnown RBP22.28■■□□□ 1.16
RTN4-207ENST00000402434 ANKLE1Q8NAG6 615 aa22.28■■□□□ 1.16
RTN4-207ENST00000402434 PCDHA1Q9Y5I3 950 aa22.28■■□□□ 1.16
RTN4-207ENST00000402434 PLEKHA8P1O95397 391 aa22.28■■□□□ 1.16
RTN4-207ENST00000402434 SLC30A10Q6XR72 485 aa22.28■■□□□ 1.16
RTN4-207ENST00000402434 RUFY3Q7L099 469 aa22.28■■□□□ 1.16
RTN4-207ENST00000402434 ARMCX2Q7L311 632 aa22.28■■□□□ 1.16
RTN4-207ENST00000402434 HOMER1Q86YM7 354 aa22.28■■□□□ 1.16
RTN4-207ENST00000402434 MCF2L2Q86YR7 1114 aa22.28■■□□□ 1.16
RTN4-207ENST00000402434 PURBQ96QR8 312 aaKnown RBP22.28■■□□□ 1.16
RTN4-207ENST00000402434 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.28■■□□□ 1.16
RTN4-207ENST00000402434 PDE4DIPQ5VU43 2346 aa22.27■■□□□ 1.16
RTN4-207ENST00000402434 LOC102724159A0A0B4J2E5 919 aa22.27■■□□□ 1.16
RTN4-207ENST00000402434 ASB14A6NK59 587 aa22.27■■□□□ 1.16
RTN4-207ENST00000402434 OPLAHO14841 1288 aa22.27■■□□□ 1.16
RTN4-207ENST00000402434 ZBTB43O43298 467 aa22.27■■□□□ 1.16
RTN4-207ENST00000402434 MNX1P50219 401 aaPredicted RBP22.27■■□□□ 1.16
RTN4-207ENST00000402434 FGD1P98174 961 aa22.27■■□□□ 1.16
RTN4-207ENST00000402434 GHRHRQ02643 423 aa22.27■■□□□ 1.16
RTN4-207ENST00000402434 PWP2Q15269 919 aaKnown RBP22.27■■□□□ 1.16
RTN4-207ENST00000402434 TMTC3Q6ZXV5 915 aa22.27■■□□□ 1.16
RTN4-207ENST00000402434 RAB11FIP4Q86YS3 637 aa22.27■■□□□ 1.16
RTN4-207ENST00000402434 MORC4Q8TE76 937 aa22.27■■□□□ 1.16
RTN4-207ENST00000402434 TBC1D5Q92609 795 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms