RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 HOMER1Q86YM7 354 aa20.15■□□□□ 0.82
HDAC11-202ENST00000402259 MMP19Q99542 508 aa20.15■□□□□ 0.82
HDAC11-202ENST00000402259 SLKQ9H2G2 1235 aaPredicted RBP20.15■□□□□ 0.82
HDAC11-202ENST00000402259 SEC63Q9UGP8 760 aaKnown RBP20.15■□□□□ 0.82
HDAC11-202ENST00000402259 LIMCH1Q9UPQ0 1083 aa20.15■□□□□ 0.82
HDAC11-202ENST00000402259 RBBP6Q7Z6E9 1792 aaKnown RBP20.15■□□□□ 0.82
HDAC11-202ENST00000402259 PFASO15067 1338 aa20.14■□□□□ 0.81
HDAC11-202ENST00000402259 HOXC6P09630 235 aa20.14■□□□□ 0.81
HDAC11-202ENST00000402259 XRCC5P13010 732 aaKnown RBP20.14■□□□□ 0.81
HDAC11-202ENST00000402259 RGS2P41220 211 aa20.14■□□□□ 0.81
HDAC11-202ENST00000402259 FLT3LGP49771 235 aa20.14■□□□□ 0.81
HDAC11-202ENST00000402259 MAP2K5Q13163 448 aa20.14■□□□□ 0.81
HDAC11-202ENST00000402259 CPLX2Q6PUV4 134 aaKnown RBP20.14■□□□□ 0.81
HDAC11-202ENST00000402259 CMTR1Q8N1G2 835 aaKnown RBP20.14■□□□□ 0.81
HDAC11-202ENST00000402259 RGS22Q8NE09 1264 aa20.14■□□□□ 0.81
HDAC11-202ENST00000402259 LARP6Q9BRS8 491 aaKnown RBP20.14■□□□□ 0.81
HDAC11-202ENST00000402259 GABRQQ9UN88 632 aa20.14■□□□□ 0.81
HDAC11-202ENST00000402259 MRPL11Q9Y3B7 192 aaKnown RBP20.14■□□□□ 0.81
HDAC11-202ENST00000402259 PPP1R11O60927 126 aaPredicted RBP20.13■□□□□ 0.81
HDAC11-202ENST00000402259 ECM2O94769 699 aaPredicted RBP20.13■□□□□ 0.81
HDAC11-202ENST00000402259 ADORA2AP29274 412 aa20.13■□□□□ 0.81
HDAC11-202ENST00000402259 SLC4A3P48751 1232 aa20.13■□□□□ 0.81
HDAC11-202ENST00000402259 CCT2P78371 535 aaKnown RBP20.13■□□□□ 0.81
HDAC11-202ENST00000402259 SAMD3Q8N6K7 520 aa20.13■□□□□ 0.81
HDAC11-202ENST00000402259 CLEC4DQ8WXI8 215 aa20.13■□□□□ 0.81
HDAC11-202ENST00000402259 ZSCAN31Q96LW9 406 aaPredicted RBP20.13■□□□□ 0.81
HDAC11-202ENST00000402259 APBA2Q99767 749 aa20.13■□□□□ 0.81
HDAC11-202ENST00000402259 RNF26Q9BY78 433 aaPredicted RBP20.13■□□□□ 0.81
HDAC11-202ENST00000402259 HOMER2Q9NSB8 354 aa20.13■□□□□ 0.81
HDAC11-202ENST00000402259 SLC5A4Q9NY91 659 aa20.13■□□□□ 0.81
HDAC11-202ENST00000402259 PCDHA1Q9Y5I3 950 aa20.13■□□□□ 0.81
HDAC11-202ENST00000402259 PLXNA1Q9UIW2 1896 aa20.12■□□□□ 0.81
HDAC11-202ENST00000402259 DNAJC25-GNG10A0A024R161 153 aa20.12■□□□□ 0.81
HDAC11-202ENST00000402259 hCG_1984214I3L0E3 225 aa20.12■□□□□ 0.81
HDAC11-202ENST00000402259 CPLX1O14810 134 aa20.12■□□□□ 0.81
HDAC11-202ENST00000402259 PRPF3O43395 683 aaKnown RBP20.12■□□□□ 0.81
HDAC11-202ENST00000402259 MCM2P49736 904 aa20.12■□□□□ 0.81
HDAC11-202ENST00000402259 SCRN1Q12765 414 aa20.12■□□□□ 0.81
HDAC11-202ENST00000402259 STK3Q13188 491 aa20.12■□□□□ 0.81
HDAC11-202ENST00000402259 ME3Q16798 604 aa20.12■□□□□ 0.81
HDAC11-202ENST00000402259 USH1GQ495M9 461 aa20.12■□□□□ 0.81
HDAC11-202ENST00000402259 MUM1L1Q5H9M0 696 aa20.12■□□□□ 0.81
HDAC11-202ENST00000402259 TRMT44Q8IYL2 757 aaKnown RBP20.12■□□□□ 0.81
HDAC11-202ENST00000402259 ANKRD35Q8N283 1001 aa20.12■□□□□ 0.81
HDAC11-202ENST00000402259 CCDC82Q8N4S0 544 aa20.12■□□□□ 0.81
HDAC11-202ENST00000402259 ZNF713Q8N859 430 aaPredicted RBP20.12■□□□□ 0.81
HDAC11-202ENST00000402259 RAET1EQ8TD07 263 aa20.12■□□□□ 0.81
HDAC11-202ENST00000402259 PXYLP1Q8TE99 480 aa20.12■□□□□ 0.81
HDAC11-202ENST00000402259 GTF3C6Q969F1 213 aa20.12■□□□□ 0.81
HDAC11-202ENST00000402259 NCOA5Q9HCD5 579 aaKnown RBP20.12■□□□□ 0.81
HDAC11-202ENST00000402259 A1CFQ9NQ94 594 aaKnown RBP20.12■□□□□ 0.81
HDAC11-202ENST00000402259 DIS3Q9Y2L1 958 aaKnown RBP20.12■□□□□ 0.81
HDAC11-202ENST00000402259 CDKL5O76039 1030 aa20.11■□□□□ 0.81
HDAC11-202ENST00000402259 GHRHRQ02643 423 aa20.11■□□□□ 0.81
HDAC11-202ENST00000402259 MCF2L2Q86YR7 1114 aa20.11■□□□□ 0.81
HDAC11-202ENST00000402259 DDX11Q96FC9 970 aa20.11■□□□□ 0.81
HDAC11-202ENST00000402259 SH2B1Q9NRF2 756 aaPredicted RBP20.11■□□□□ 0.81
HDAC11-202ENST00000402259 MAP3K20Q9NYL2 800 aaKnown RBP20.11■□□□□ 0.81
HDAC11-202ENST00000402259 PTCH2Q9Y6C5 1203 aa20.11■□□□□ 0.81
HDAC11-202ENST00000402259 V9GY48 417 aaPredicted RBP20.11■□□□□ 0.81
HDAC11-202ENST00000402259 NFIBO00712 420 aa20.1■□□□□ 0.81
HDAC11-202ENST00000402259 TAL1P17542 331 aaPredicted RBP20.1■□□□□ 0.81
HDAC11-202ENST00000402259 NOL8Q76FK4 1167 aaKnown RBP20.1■□□□□ 0.81
HDAC11-202ENST00000402259 DPP9Q86TI2 863 aa20.1■□□□□ 0.81
HDAC11-202ENST00000402259 TEX2Q8IWB9 1127 aa20.1■□□□□ 0.81
HDAC11-202ENST00000402259 SLAIN1Q8ND83 568 aa20.1■□□□□ 0.81
HDAC11-202ENST00000402259 CYP39A1Q9NYL5 469 aa20.1■□□□□ 0.81
HDAC11-202ENST00000402259 COBLO75128 1261 aa20.09■□□□□ 0.81
HDAC11-202ENST00000402259 LARGE1O95461 756 aa20.09■□□□□ 0.81
HDAC11-202ENST00000402259 AKAP17AQ02040 695 aaKnown RBP20.09■□□□□ 0.81
HDAC11-202ENST00000402259 PFKFB3Q16875 520 aaPredicted RBP20.09■□□□□ 0.81
HDAC11-202ENST00000402259 ZNF792Q3KQV3 632 aa20.09■□□□□ 0.81
HDAC11-202ENST00000402259 PPP1R18Q6NYC8 613 aa20.09■□□□□ 0.81
HDAC11-202ENST00000402259 TRIM22Q8IYM9 498 aa20.09■□□□□ 0.81
HDAC11-202ENST00000402259 PIBF1Q8WXW3 757 aa20.09■□□□□ 0.81
HDAC11-202ENST00000402259 MCOLN1Q9GZU1 580 aa20.09■□□□□ 0.81
HDAC11-202ENST00000402259 STK36Q9NRP7 1315 aa20.08■□□□□ 0.81
HDAC11-202ENST00000402259 LCTP09848 1927 aa20.08■□□□□ 0.81
HDAC11-202ENST00000402259 OPLAHO14841 1288 aa20.08■□□□□ 0.81
HDAC11-202ENST00000402259 ADCY3O60266 1144 aa20.08■□□□□ 0.81
HDAC11-202ENST00000402259 CYP2B6P20813 491 aa20.08■□□□□ 0.81
HDAC11-202ENST00000402259 SSRP1Q08945 709 aaKnown RBP20.08■□□□□ 0.81
HDAC11-202ENST00000402259 OLFML2BQ68BL8 750 aa20.08■□□□□ 0.81
HDAC11-202ENST00000402259 NSMFQ6X4W1 530 aa20.08■□□□□ 0.81
HDAC11-202ENST00000402259 RNF207Q6ZRF8 634 aa20.08■□□□□ 0.81
HDAC11-202ENST00000402259 ZNF467Q7Z7K2 595 aaPredicted RBP20.08■□□□□ 0.81
HDAC11-202ENST00000402259 MSL3Q8N5Y2 521 aaKnown RBP20.08■□□□□ 0.81
HDAC11-202ENST00000402259 FAM133AQ8N9E0 248 aa20.08■□□□□ 0.81
HDAC11-202ENST00000402259 LOC102724159A0A0B4J2E5 919 aa20.07■□□□□ 0.8
HDAC11-202ENST00000402259 hCG_1642624A0A1W2PR95 340 aa20.07■□□□□ 0.8
HDAC11-202ENST00000402259 POTEB2H3BUK9 544 aa20.07■□□□□ 0.8
HDAC11-202ENST00000402259 IGHA2P01877 340 aa20.07■□□□□ 0.8
HDAC11-202ENST00000402259 PGK2P07205 417 aa20.07■□□□□ 0.8
HDAC11-202ENST00000402259 SCG2P13521 617 aa20.07■□□□□ 0.8
HDAC11-202ENST00000402259 GRK4P32298 578 aa20.07■□□□□ 0.8
HDAC11-202ENST00000402259 PWP2Q15269 919 aaKnown RBP20.07■□□□□ 0.8
HDAC11-202ENST00000402259 PKN1Q16512 942 aa20.07■□□□□ 0.8
HDAC11-202ENST00000402259 COL13A1Q5TAT6 717 aaPredicted RBP20.07■□□□□ 0.8
HDAC11-202ENST00000402259 FAM177A1Q8N128 213 aaPredicted RBP20.07■□□□□ 0.8
HDAC11-202ENST00000402259 NPLOC4Q8TAT6 608 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms