RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 FAM81BQ96LP2 452 aa9.11□□□□□ -0.95
CHD8-201ENST00000399982 PAG1Q9NWQ8 432 aa9.11□□□□□ -0.95
CHD8-201ENST00000399982 MAD1L1Q9Y6D9 718 aa9.11□□□□□ -0.95
CHD8-201ENST00000399982 ARHGAP31Q2M1Z3 1444 aa9.11□□□□□ -0.95
CHD8-201ENST00000399982 CYP2C19P33261 490 aa9.11□□□□□ -0.95
CHD8-201ENST00000399982 PDE4DQ08499 809 aa9.11□□□□□ -0.95
CHD8-201ENST00000399982 ABHD8Q96I13 439 aa9.11□□□□□ -0.95
CHD8-201ENST00000399982 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.11□□□□□ -0.95
CHD8-201ENST00000399982 PARD6BQ9BYG5 372 aa9.11□□□□□ -0.95
CHD8-201ENST00000399982 CUEDC2Q9H467 287 aa9.11□□□□□ -0.95
CHD8-201ENST00000399982 IPO11Q9UI26 975 aaKnown RBP9.11□□□□□ -0.95
CHD8-201ENST00000399982 CCDC188H7C350 402 aa9.11□□□□□ -0.95
CHD8-201ENST00000399982 DKC1O60832 514 aaKnown RBP eCLIP9.11□□□□□ -0.958e-19■■■■■ 41.7
CHD8-201ENST00000399982 PLCG2P16885 1265 aa9.11□□□□□ -0.95
CHD8-201ENST00000399982 SMTNP53814 917 aa9.11□□□□□ -0.95
CHD8-201ENST00000399982 BRDTQ58F21 947 aaPredicted RBP9.11□□□□□ -0.95
CHD8-201ENST00000399982 C16orf87Q6PH81 154 aa9.11□□□□□ -0.95
CHD8-201ENST00000399982 BTN2A2Q8WVV5 523 aa9.11□□□□□ -0.95
CHD8-201ENST00000399982 SNAPC4Q5SXM2 1469 aa9.11□□□□□ -0.95
CHD8-201ENST00000399982 GARSP41250 739 aaKnown RBP9.1□□□□□ -0.95
CHD8-201ENST00000399982 TRIML2Q8N7C3 387 aa9.1□□□□□ -0.95
CHD8-201ENST00000399982 SUGT1Q9Y2Z0 365 aa9.1□□□□□ -0.95
CHD8-201ENST00000399982 KDM5DQ9BY66 1539 aa9.1□□□□□ -0.95
CHD8-201ENST00000399982 TARSL2A2RTX5 802 aaKnown RBP9.1□□□□□ -0.95
CHD8-201ENST00000399982 YWHAEP62258 255 aaKnown RBP9.1□□□□□ -0.95
CHD8-201ENST00000399982 KLC4Q9NSK0 619 aa9.1□□□□□ -0.95
CHD8-201ENST00000399982 MRGBPQ9NV56 204 aa9.1□□□□□ -0.95
CHD8-201ENST00000399982 ANO9A1A5B4 782 aa9.1□□□□□ -0.95
CHD8-201ENST00000399982 FOXP2O15409 715 aa9.1□□□□□ -0.95
CHD8-201ENST00000399982 HNRNPCP07910 306 aaKnown RBP eCLIP9.1□□□□□ -0.95
CHD8-201ENST00000399982 MRPS25P82663 173 aaKnown RBP9.1□□□□□ -0.95
CHD8-201ENST00000399982 FIS1Q9Y3D6 152 aa9.1□□□□□ -0.95
CHD8-201ENST00000399982 RANBP1P43487 201 aa9.1□□□□□ -0.95
CHD8-201ENST00000399982 KPNA2P52292 529 aaKnown RBP9.1□□□□□ -0.95
CHD8-201ENST00000399982 PRPF38AQ8NAV1 312 aaKnown RBP9.1□□□□□ -0.95
CHD8-201ENST00000399982 NELFBQ8WX92 580 aa9.1□□□□□ -0.95
CHD8-201ENST00000399982 ALKBH8Q96BT7 664 aaKnown RBP9.1□□□□□ -0.95
CHD8-201ENST00000399982 TNNI2P48788 182 aa9.1□□□□□ -0.95
CHD8-201ENST00000399982 MCUQ8NE86 351 aa9.1□□□□□ -0.95
CHD8-201ENST00000399982 TRIM11Q96F44 468 aa9.1□□□□□ -0.95
CHD8-201ENST00000399982 ZNF274Q96GC6 653 aaPredicted RBP9.1□□□□□ -0.95
CHD8-201ENST00000399982 NT5C3AQ9H0P0 336 aa9.1□□□□□ -0.95
CHD8-201ENST00000399982 GOLGA8CPA6NN73 597 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 SEMA3EO15041 775 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 TRIM50Q86XT4 487 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 CDKL2Q92772 493 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 HOOK2Q96ED9 719 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 PDLIM2Q96JY6 352 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 IFT122Q9HBG6 1241 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 SNRKQ9NRH2 765 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 ANGEL1Q9UNK9 670 aaKnown RBP9.09□□□□□ -0.95
CHD8-201ENST00000399982 CAPN9O14815 690 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 MCF2LO15068 1137 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 SERPINB4P48594 390 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 SEMA3FQ13275 785 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 SCYL2Q6P3W7 929 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 SLC7A5P2Q9GIP4 190 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 UPF3AQ9H1J1 476 aaKnown RBP9.09□□□□□ -0.95
CHD8-201ENST00000399982 COG4Q9H9E3 785 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 DIAPH2O60879 1101 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 DHX9Q08211 1270 aaKnown RBP9.09□□□□□ -0.95
CHD8-201ENST00000399982 ANO5Q75V66 913 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 ANKLE2Q86XL3 938 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 FLCNQ8NFG4 579 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 NEK9Q8TD19 979 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 GSDMAQ96QA5 445 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 ZNF277Q9NRM2 450 aaPredicted RBP9.09□□□□□ -0.95
CHD8-201ENST00000399982 LCMT1Q9UIC8 334 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 COPG1Q9Y678 874 aaKnown RBP9.09□□□□□ -0.95
CHD8-201ENST00000399982 POLR2DO15514 142 aaKnown RBP9.09□□□□□ -0.95
CHD8-201ENST00000399982 APOA1P02647 267 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 STAT1P42224 750 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 GUCY2FP51841 1108 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 SNX1Q13596 522 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 CYB5RLQ6IPT4 315 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 CAPN12Q6ZSI9 719 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 TEKT1Q969V4 418 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 KCNJ18B7U540 433 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 PGRMC1O00264 195 aaKnown RBP9.09□□□□□ -0.95
CHD8-201ENST00000399982 CARSP49589 748 aaKnown RBP9.09□□□□□ -0.95
CHD8-201ENST00000399982 CYLC2Q14093 348 aaPredicted RBP9.09□□□□□ -0.95
CHD8-201ENST00000399982 KCNJ12Q14500 433 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 ASZ1Q8WWH4 475 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 PLEKHA4Q9H4M7 779 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 DIABLOQ9NR28 239 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 GRM8O00222 908 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 ATG16L1Q676U5 607 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 RNF169Q8NCN4 708 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 TBC1D23Q9NUY8 699 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 KDM3AQ9Y4C1 1321 aa9.09□□□□□ -0.95
CHD8-201ENST00000399982 DDX39AO00148 427 aaKnown RBP9.09□□□□□ -0.96
CHD8-201ENST00000399982 SEC24BO95487 1268 aa9.09□□□□□ -0.96
CHD8-201ENST00000399982 AP2B1P63010 937 aa9.09□□□□□ -0.96
CHD8-201ENST00000399982 CC2D1AQ6P1N0 951 aaPredicted RBP9.09□□□□□ -0.96
CHD8-201ENST00000399982 RAB44Q7Z6P3 723 aaPredicted RBP9.09□□□□□ -0.96
CHD8-201ENST00000399982 FBXL13Q8NEE6 735 aa9.09□□□□□ -0.96
CHD8-201ENST00000399982 CAPN11Q9UMQ6 739 aa9.09□□□□□ -0.96
CHD8-201ENST00000399982 MCF2P10911 925 aa9.08□□□□□ -0.96
CHD8-201ENST00000399982 ATF2P15336 505 aa9.08□□□□□ -0.96
CHD8-201ENST00000399982 KRT4P19013 534 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms